BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013485
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526170.1| pentatricopeptide repeat-containing protein,...    89   3e-16
ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
emb|CBI35192.3| unnamed protein product [Vitis vinifera]               82   4e-14
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat...    82   4e-14
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...    82   4e-14

>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = -3

Query: 282 IFYSLSTRELQPDTWTHNIMINGFFKEGKLKEAQDLYCEMQEKGIAVDDLTFNILVQGFL 103
           IF  + T  L P+  T+NIMING  KEGKL EA+ L+ +M+E G   D+++FN +++GFL
Sbjct: 381 IFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFL 440

Query: 102 DQKNDMHKAMQFLNTMTDNGFSPNAKTTSLLVDL 1
            Q+N + KAM+FL  M +  FSPN   T +LV+L
Sbjct: 441 -QENQVQKAMEFLKRMREKNFSPNDSVTLMLVNL 473


>ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/94 (46%), Positives = 56/94 (59%)
 Frame = -3

Query: 282 IFYSLSTRELQPDTWTHNIMINGFFKEGKLKEAQDLYCEMQEKGIAVDDLTFNILVQGFL 103
           +F +L+ R LQPD WTHNIMI G  K G L EA  L+ EM E G   +  T+N + QG L
Sbjct: 428 LFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLL 487

Query: 102 DQKNDMHKAMQFLNTMTDNGFSPNAKTTSLLVDL 1
            Q N   +A+Q L  M   GFS +  TT+LLV +
Sbjct: 488 -QNNKTSRAIQLLEEMLARGFSADVSTTALLVKM 520


>emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/94 (41%), Positives = 63/94 (67%)
 Frame = -3

Query: 282 IFYSLSTRELQPDTWTHNIMINGFFKEGKLKEAQDLYCEMQEKGIAVDDLTFNILVQGFL 103
           +F +LS++ LQP+ WT+NIMI+G  K+G L EA  L+ EM + G + +D T+N++ +GFL
Sbjct: 417 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 476

Query: 102 DQKNDMHKAMQFLNTMTDNGFSPNAKTTSLLVDL 1
            + N+  + ++ L  M   GFS +  TT+LLV +
Sbjct: 477 -RNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 509


>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 39/94 (41%), Positives = 63/94 (67%)
 Frame = -3

Query: 282 IFYSLSTRELQPDTWTHNIMINGFFKEGKLKEAQDLYCEMQEKGIAVDDLTFNILVQGFL 103
           +F +LS++ LQP+ WT+NIMI+G  K+G L EA  L+ EM + G + +D T+N++ +GFL
Sbjct: 477 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536

Query: 102 DQKNDMHKAMQFLNTMTDNGFSPNAKTTSLLVDL 1
            + N+  + ++ L  M   GFS +  TT+LLV +
Sbjct: 537 -RNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569


>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/94 (43%), Positives = 60/94 (63%)
 Frame = -3

Query: 282 IFYSLSTRELQPDTWTHNIMINGFFKEGKLKEAQDLYCEMQEKGIAVDDLTFNILVQGFL 103
           +F SLS++ L PD WT+ IMING   +G L EA  L+ EM   G + DD T+N++ +GFL
Sbjct: 481 LFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFL 540

Query: 102 DQKNDMHKAMQFLNTMTDNGFSPNAKTTSLLVDL 1
            + N+   A+Q L  M   GFS +A T +L+V++
Sbjct: 541 -RNNETLSAIQLLQEMLGRGFSADASTITLIVEM 573