BLASTX nr result

ID: Coptis25_contig00013483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013483
         (2245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-39
ref|XP_002531215.1| GATA transcription factor, putative [Ricinus...   166   2e-38
gb|ABK95062.1| unknown [Populus trichocarpa]                          164   7e-38
dbj|BAJ34326.1| unnamed protein product [Thellungiella halophila]     163   2e-37
gb|ADL36698.1| GATA domain class transcription factor [Malus x d...   162   4e-37

>ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|222833801|gb|EEE72278.1|
            predicted protein [Populus trichocarpa]
          Length = 544

 Score =  169 bits (428), Expect = 3e-39
 Identities = 100/232 (43%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
 Frame = -1

Query: 1735 MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYFPIQARVFTPPDYEG 1556
            MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKG+L NY P+ AR   P DYE 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARA-GPDDYED 59

Query: 1555 SRYSRKDKLPPLTKYKNSYIKV-----HNESKVEDGPSY---AAYPSSFXXXXXXXXXXX 1400
             R SR   L  ++  KN  +K+     + + +V +G +      Y               
Sbjct: 60   HRVSR---LKSISMNKNREVKLLKRKPNYDHRVAEGVALDYNEGYRKVVDEDTSNRSSSG 116

Query: 1399 XXXXXXXSCVQFGSTDGNEISGPFESSFYDVQIPSKKRTRVRRCSPPPIENLRQDLRCHS 1220
                   SC QFGS D ++++GP +S  +D  +PS+KRT V R                 
Sbjct: 117  SAISNSESCAQFGSADASDLTGPAQSVVWDSLVPSRKRTCVNR---------------PK 161

Query: 1219 PSPVEKLRQDLVSILQQQDSSYNXXXXXXXXXXXXXXXXFQSEIGHGSVLLK 1064
            PSPVEKL +DL +IL +Q SS                     EIGHGSVL++
Sbjct: 162  PSPVEKLTKDLYTILHEQQSSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIR 213


>ref|XP_002531215.1| GATA transcription factor, putative [Ricinus communis]
            gi|223529175|gb|EEF31151.1| GATA transcription factor,
            putative [Ricinus communis]
          Length = 542

 Score =  166 bits (421), Expect = 2e-38
 Identities = 99/230 (43%), Positives = 122/230 (53%), Gaps = 6/230 (2%)
 Frame = -1

Query: 1735 MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYFPIQARVFTPPDYEG 1556
            MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKG+L NY P+ AR   P DYE 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARA-DPDDYED 59

Query: 1555 SRYSRKDKLPPLTKYKNSYI---KVHNESKVEDGPSY---AAYPSSFXXXXXXXXXXXXX 1394
             R SR   +  + K K+  +   K ++++ V  G  +     Y                 
Sbjct: 60   HRVSRVKSI-SINKNKDVKLLKRKANHDNGVVGGVVHDYNQGYRKVLDEDISNRSSSGSA 118

Query: 1393 XXXXXSCVQFGSTDGNEISGPFESSFYDVQIPSKKRTRVRRCSPPPIENLRQDLRCHSPS 1214
                 SC QFGS D ++++GP +S  +D  +PSKKRT V R                  S
Sbjct: 119  ISNSESCAQFGSADASDLTGPAQSVVWDSMVPSKKRTCVNR---------------PKQS 163

Query: 1213 PVEKLRQDLVSILQQQDSSYNXXXXXXXXXXXXXXXXFQSEIGHGSVLLK 1064
            PVEKL +DL +IL +Q SS                     EIGHGSVL++
Sbjct: 164  PVEKLTKDLYTILHEQQSSCFSGSSEEDLLFESETPMVSVEIGHGSVLIR 213


>gb|ABK95062.1| unknown [Populus trichocarpa]
          Length = 540

 Score =  164 bits (416), Expect = 7e-38
 Identities = 110/305 (36%), Positives = 142/305 (46%), Gaps = 5/305 (1%)
 Frame = -1

Query: 1735 MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYFPIQARVFTPPDYEG 1556
            MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKG+L NY P+ AR   P DYE 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARA-EPDDYED 59

Query: 1555 SRYSRKDKLPPLTKYKNSYIKVHNESKVEDGPSYAAYPSSFXXXXXXXXXXXXXXXXXXS 1376
             R SR   L  ++  KN  +K+       D      Y   +                  S
Sbjct: 60   HRVSR---LKSVSISKNKEVKLLKRKPNYDNRVALDYNQGYRKVVDEDTSNRSSSGSAIS 116

Query: 1375 ----CVQFGSTDGNEISGPFESSFYDVQIPSKKRTRVRRCSPPPIENLRQDLRCHSPSPV 1208
                C QFGS + ++++GP +S  +D  +PS+KRT V R                 PS V
Sbjct: 117  NPESCAQFGSAEASDLTGPAQSVVWDSLVPSRKRTCVNR---------------PKPSSV 161

Query: 1207 EKLRQDLVSILQQQDSSYNXXXXXXXXXXXXXXXXFQSEIGHGSVLLK-PQVXXXXXXXX 1031
            EKL +DL +IL +Q SS                     EIGHGSVL++ P          
Sbjct: 162  EKLTKDLYTILHEQQSSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIRHPSSIARDEESE 221

Query: 1030 XXSHRTENKASCIRKTYMGSSYWSLQSQNNQICSLQSVKDDMIQDTGDTNELKENLVKQC 851
              S   ENK     + Y       + ++N  + +   + +     TG   + +E L +  
Sbjct: 222  ASSLSVENKQYLTNEAYSHPVILPVHNENKSVNTTYPITETTKNLTGQGMQ-QEQLKRDK 280

Query: 850  FSTNK 836
            F   K
Sbjct: 281  FPHEK 285


>dbj|BAJ34326.1| unnamed protein product [Thellungiella halophila]
          Length = 516

 Score =  163 bits (413), Expect = 2e-37
 Identities = 95/233 (40%), Positives = 120/233 (51%), Gaps = 9/233 (3%)
 Frame = -1

Query: 1735 MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYFPIQARVFTPPDYEG 1556
            MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKG+LVNY P+ +R       + 
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTPLHSRADCDDHEDH 60

Query: 1555 SRYSRKDKLPPLTKYKNSYIKVHNESKVEDGPS---------YAAYPSSFXXXXXXXXXX 1403
             RY R   +   +K K +  K+     +++  S         Y    +            
Sbjct: 61   QRYQRMKSISMSSKNKET--KMLKRKAIQENISIKRPLLEFNYGLKKAVVEEDASNRSSS 118

Query: 1402 XXXXXXXXSCVQFGSTDGNEISGPFESSFYDVQIPSKKRTRVRRCSPPPIENLRQDLRCH 1223
                    SC QF S DG+E++GP +S+ +D  +PSK+RT V R                
Sbjct: 119  GSAISNSESCAQFSSADGSELTGPSQSNTWDTTVPSKRRTCVGR---------------P 163

Query: 1222 SPSPVEKLRQDLVSILQQQDSSYNXXXXXXXXXXXXXXXXFQSEIGHGSVLLK 1064
              S VEKLR+DL +ILQ+Q SS                     EIGHGSVL++
Sbjct: 164  KSSSVEKLRKDLYNILQEQQSSCLSVSSEEDLLFGNEMSMVSVEIGHGSVLMR 216


>gb|ADL36698.1| GATA domain class transcription factor [Malus x domestica]
          Length = 542

 Score =  162 bits (410), Expect = 4e-37
 Identities = 110/307 (35%), Positives = 142/307 (46%), Gaps = 24/307 (7%)
 Frame = -1

Query: 1735 MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGSLVNYFPIQARVFTPPDYEG 1556
            MGKQGPC HCGVTSTPLWRNGPP+KPVLCNACGSRWRTKG+LVNY P+ AR   P D+E 
Sbjct: 1    MGKQGPCYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGTLVNYTPLHARA-EPDDFED 59

Query: 1555 SRYSR-------KDKLPPLTK----------------YKNSYIKVHNESKVEDGPSYAAY 1445
             R SR       K K   L K                Y + + K+  E K     S +A 
Sbjct: 60   HRVSRVKSISVNKSKEIKLVKRKQNPESMVIGGVNSDYSHGFRKIIEEDKSNRSSSGSAV 119

Query: 1444 PSSFXXXXXXXXXXXXXXXXXXSCVQFGSTDGNEISGPFESSFYDVQIPSKKRTRVRRCS 1265
             +S                   SC QFGS D ++++GP +S  +D  +PS+KRT + R  
Sbjct: 120  SNS------------------ESCAQFGSGDASDLTGPAQSMVWDSMVPSRKRTCIGRL- 160

Query: 1264 PPPIENLRQDLRCHSPSPVEKLRQDLVSILQQQDSSYNXXXXXXXXXXXXXXXXFQSEIG 1085
                           PSPVE+L +DL +IL +Q SS                     EIG
Sbjct: 161  --------------KPSPVERLTKDLYTILHEQQSSCFSGSSEEDLLFESETPMVSVEIG 206

Query: 1084 HGSVLLK-PQVXXXXXXXXXXSHRTENKASCIRKTYMGSSYWSLQSQNNQICSLQSVKDD 908
            HGSVL++ P            S   +NK     + Y  S+   + + N  +    +V   
Sbjct: 207  HGSVLIRHPNSIAREEESEASSISVDNKQCLANEVYSRSATLFVHNNNKGVNMASTVSGR 266

Query: 907  MIQDTGD 887
            M    G+
Sbjct: 267  MNNVAGE 273


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