BLASTX nr result

ID: Coptis25_contig00013479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013479
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265...   158   4e-37
emb|CBI26658.3| unnamed protein product [Vitis vinifera]              158   4e-37
ref|NP_200317.2| uncharacterized protein [Arabidopsis thaliana] ...   150   1e-34
ref|NP_001190541.1| uncharacterized protein [Arabidopsis thalian...   150   1e-34

>ref|XP_002317338.1| predicted protein [Populus trichocarpa] gi|222860403|gb|EEE97950.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/112 (71%), Positives = 96/112 (85%), Gaps = 3/112 (2%)
 Frame = +1

Query: 1   SDSLQSIMREAGPCTEAAVVSPGSSSA---LYARVSTGDLVLRLGAHQPSGNLTMLETGE 171
           + S++S+MR AG C+E +    G+ ++   LYAR+STG+LVLRLGA +P+ NLTMLETGE
Sbjct: 184 TQSIESVMRHAGSCSEESADLQGTVTSHHILYARISTGELVLRLGADRPADNLTMLETGE 243

Query: 172 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGC 327
           PVY+P+TQEGP+LTEDLIKE EEFVLRTGS GAGCSQLLSDMQAFKAANPGC
Sbjct: 244 PVYSPITQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGC 295


>ref|XP_002277895.2| PREDICTED: uncharacterized protein LOC100265786 [Vitis vinifera]
          Length = 694

 Score =  158 bits (400), Expect = 4e-37
 Identities = 82/111 (73%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   SDSLQSIMREAGPCTEAAVVSPG---SSSALYARVSTGDLVLRLGAHQPSGNLTMLETGE 171
           ++SL S++REAG   E   VS G     S LYAR+STG+LVLRLGA +PS NL MLETGE
Sbjct: 331 TESLDSVIREAGSNIEEPFVSKGLVDEKSILYARISTGELVLRLGAGRPSDNLMMLETGE 390

Query: 172 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPG 324
           P+Y PVTQEGP+LTEDLIKE EEFVLRTGS GAGCSQLLSDMQAFKAANPG
Sbjct: 391 PIYVPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPG 441


>emb|CBI26658.3| unnamed protein product [Vitis vinifera]
          Length = 692

 Score =  158 bits (400), Expect = 4e-37
 Identities = 82/111 (73%), Positives = 91/111 (81%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   SDSLQSIMREAGPCTEAAVVSPG---SSSALYARVSTGDLVLRLGAHQPSGNLTMLETGE 171
           ++SL S++REAG   E   VS G     S LYAR+STG+LVLRLGA +PS NL MLETGE
Sbjct: 329 TESLDSVIREAGSNIEEPFVSKGLVDEKSILYARISTGELVLRLGAGRPSDNLMMLETGE 388

Query: 172 PVYTPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPG 324
           P+Y PVTQEGP+LTEDLIKE EEFVLRTGS GAGCSQLLSDMQAFKAANPG
Sbjct: 389 PIYVPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPG 439


>ref|NP_200317.2| uncharacterized protein [Arabidopsis thaliana]
           gi|51968512|dbj|BAD42948.1| unknown protein [Arabidopsis
           thaliana] gi|332009192|gb|AED96575.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 662

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/109 (66%), Positives = 88/109 (80%)
 Frame = +1

Query: 1   SDSLQSIMREAGPCTEAAVVSPGSSSALYARVSTGDLVLRLGAHQPSGNLTMLETGEPVY 180
           S++L ++MR+A    E + VS    S LYA+ ++G+L+LRLG +    NLTMLETGEPVY
Sbjct: 321 SEALDAVMRQASSANEKSDVSESMGSLLYAKSNSGELILRLGVYNQVENLTMLETGEPVY 380

Query: 181 TPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGC 327
           +P+TQEGP+LTEDLI+E EE VLRTGS GAGCSQLLSDMQAFKAANPGC
Sbjct: 381 SPITQEGPLLTEDLIRETEELVLRTGSMGAGCSQLLSDMQAFKAANPGC 429


>ref|NP_001190541.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332009193|gb|AED96576.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 569

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/109 (66%), Positives = 88/109 (80%)
 Frame = +1

Query: 1   SDSLQSIMREAGPCTEAAVVSPGSSSALYARVSTGDLVLRLGAHQPSGNLTMLETGEPVY 180
           S++L ++MR+A    E + VS    S LYA+ ++G+L+LRLG +    NLTMLETGEPVY
Sbjct: 228 SEALDAVMRQASSANEKSDVSESMGSLLYAKSNSGELILRLGVYNQVENLTMLETGEPVY 287

Query: 181 TPVTQEGPILTEDLIKEAEEFVLRTGSCGAGCSQLLSDMQAFKAANPGC 327
           +P+TQEGP+LTEDLI+E EE VLRTGS GAGCSQLLSDMQAFKAANPGC
Sbjct: 288 SPITQEGPLLTEDLIRETEELVLRTGSMGAGCSQLLSDMQAFKAANPGC 336


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