BLASTX nr result

ID: Coptis25_contig00013464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013464
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   125   1e-26
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              125   1e-26
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...    87   4e-15
ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203...    83   5e-14
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...    82   8e-14

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  125 bits (313), Expect = 1e-26
 Identities = 83/195 (42%), Positives = 108/195 (55%), Gaps = 5/195 (2%)
 Frame = -1

Query: 571 LKALACTRSLIVNHSTSNETXXXXXXXXXXXLNSTQXXXXXXXXXXXXXXXXXXHDVLSN 392
           L+ALA  RSLI+N STS+ T           L  T                   H  LS 
Sbjct: 24  LRALASARSLIINSSTSDSTISALFETLTRFLQLTTEPRALHHTLKLLSDIAFHHSRLSG 83

Query: 391 VVLDNVYSYVLARKDTSRLTTKALGVLVEDVK-----SSSSYELGEDLFRSLCLSPSVSV 227
           +V  +V SY+L R D++RL+ ++L VL    +     +S+  EL +  F SLC  PSVSV
Sbjct: 84  LVFHSVRSYLL-RSDSTRLSAESLAVLSSIAEHDRSLASAMDELDDRFFVSLCFGPSVSV 142

Query: 226 RSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAALEGLIGLRELEDVRKRGVIESCY 47
           RSW L NA RF + P +L++VML  T DP+P VRR AL+GL+GL +   +   GVIE CY
Sbjct: 143 RSWFLSNAFRFPIRPYVLLTVMLGFTKDPYPYVRRVALDGLVGLSKSSVIEDCGVIEGCY 202

Query: 46  DRAVELLLDNNEYVR 2
            RAVELL D  + VR
Sbjct: 203 CRAVELLGDAEDSVR 217


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  125 bits (313), Expect = 1e-26
 Identities = 83/195 (42%), Positives = 108/195 (55%), Gaps = 5/195 (2%)
 Frame = -1

Query: 571 LKALACTRSLIVNHSTSNETXXXXXXXXXXXLNSTQXXXXXXXXXXXXXXXXXXHDVLSN 392
           L+ALA  RSLI+N STS+ T           L  T                   H  LS 
Sbjct: 24  LRALASARSLIINSSTSDSTISALFETLTRFLQLTTEPRALHHTLKLLSDIAFHHSRLSG 83

Query: 391 VVLDNVYSYVLARKDTSRLTTKALGVLVEDVK-----SSSSYELGEDLFRSLCLSPSVSV 227
           +V  +V SY+L R D++RL+ ++L VL    +     +S+  EL +  F SLC  PSVSV
Sbjct: 84  LVFHSVRSYLL-RSDSTRLSAESLAVLSSIAEHDRSLASAMDELDDRFFVSLCFGPSVSV 142

Query: 226 RSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAALEGLIGLRELEDVRKRGVIESCY 47
           RSW L NA RF + P +L++VML  T DP+P VRR AL+GL+GL +   +   GVIE CY
Sbjct: 143 RSWFLSNAFRFPIRPYVLLTVMLGFTKDPYPYVRRVALDGLVGLSKSSVIEDCGVIEGCY 202

Query: 46  DRAVELLLDNNEYVR 2
            RAVELL D  + VR
Sbjct: 203 CRAVELLGDAEDSVR 217


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
           gi|355498406|gb|AES79609.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 906

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
 Frame = -1

Query: 598 ENKSSQGHYLKALACTRSLIVNHSTSNETXXXXXXXXXXXLNSTQXXXXXXXXXXXXXXX 419
           E  SSQ   L  L+  RSL++N ST N T            N +                
Sbjct: 9   EPDSSQPLTLHNLSSIRSLLINPSTPNTTLSQILKTLTNSQNPSHHTLT----------- 57

Query: 418 XXXHDVLSNVVLDNVYSYVLARKDTSRLTTKALGVLVEDVKSSSSYELGEDLFRSLCLSP 239
                +LS+  L ++ +           TT      +  + SS  + L ++ F SLC  P
Sbjct: 58  -----LLSHPSLSHLQT----------TTTVDSLASISQLPSSKPFVLDDERFVSLCFGP 102

Query: 238 SVSVRSWVLGNARR-FCVSPGILVSVMLVCTNDPFPNVRRAALEGLIGLRELEDVRKRGV 62
           S+S R W+L NA   F V P +L +V+L  TNDP+PNVR A+LEGL+ L E  +     +
Sbjct: 103 SISGRVWMLRNAGLGFNVRPALLFTVLLGFTNDPYPNVRAASLEGLVRLSECGEFNDVSM 162

Query: 61  IESCYDRAVELLLDNNEYVR 2
           I  CY R V+LL D  + VR
Sbjct: 163 INGCYQRGVQLLNDMEDDVR 182


>ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203415 [Cucumis sativus]
           gi|449501277|ref|XP_004161326.1| PREDICTED:
           uncharacterized protein LOC101225075 [Cucumis sativus]
          Length = 815

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
 Frame = -1

Query: 292 SSSYELGEDLFRSLCLSPSVSVRSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAAL 113
           S+  E+ +  F SLC  PSVS R+W+L NA +F + P +L +V L  T DP+P VR+AAL
Sbjct: 10  STINEIDDQSFLSLCFGPSVSTRTWLLNNAEKFQLRPSLLFTVFLGFTKDPYPYVRKAAL 69

Query: 112 EGL--IGLRELEDVRKRGVIESCYDRAVELLLDNNEYVR 2
           +GL  +G    ED     +IE CY RA+ELL D  + VR
Sbjct: 70  DGLSSLGNNVFED---GSMIEGCYCRAIELLNDMEDCVR 105


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 61/217 (28%), Positives = 92/217 (42%)
 Frame = -1

Query: 652 EKSIWKKCENELXXXXXTENKSSQGHYLKALACTRSLIVNHSTSNETXXXXXXXXXXXLN 473
           E  +W+ CE  L                ++L   RSLIVN  TSN T           LN
Sbjct: 2   EHHVWRSCEGSLDITNT-----------QSLTSVRSLIVNPHTSNSTISLILEALTRSLN 50

Query: 472 STQXXXXXXXXXXXXXXXXXXHDVLSNVVLDNVYSYVLARKDTSRLTTKALGVLVEDVKS 293
            T                      LS+++  +++S  L  +  + L +      + ++  
Sbjct: 51  LTTHSLTRQRTLKLLTDVASRRPYLSSLIFQSIHSITLDFESLAALCS------ISELNK 104

Query: 292 SSSYELGEDLFRSLCLSPSVSVRSWVLGNARRFCVSPGILVSVMLVCTNDPFPNVRRAAL 113
           +   EL + LF S+C       R  +L N  R  V   +L++V L  + DP+P VR+ AL
Sbjct: 105 NLKVELVDRLFISMCFDAPACERLRLLRNGERLGVGVHVLLTVFLGFSKDPYPYVRKEAL 164

Query: 112 EGLIGLRELEDVRKRGVIESCYDRAVELLLDNNEYVR 2
            GL+ L +      + VIE CY R VELL D ++ VR
Sbjct: 165 NGLVSLCKYGVFEDKSVIEGCYRRGVELLKDADDCVR 201


Top