BLASTX nr result

ID: Coptis25_contig00013426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013426
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267083.1| PREDICTED: UPF0414 transmembrane protein C20...   163   1e-38
ref|NP_194714.1| uncharacterized protein [Arabidopsis thaliana] ...   162   2e-38
ref|XP_003610004.1| hypothetical protein MTR_4g126790 [Medicago ...   161   6e-38
ref|NP_001237830.1| uncharacterized protein LOC100527046 [Glycin...   160   1e-37
gb|ACJ85923.1| unknown [Medicago truncatula] gi|388505964|gb|AFK...   160   1e-37

>ref|XP_002267083.1| PREDICTED: UPF0414 transmembrane protein C20orf30 homolog [Vitis
           vinifera] gi|147825386|emb|CAN75495.1| hypothetical
           protein VITISV_030526 [Vitis vinifera]
           gi|297735425|emb|CBI17865.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/103 (74%), Positives = 84/103 (81%)
 Frame = +3

Query: 93  MAYVDHAFSISDEDIMMEPSYIVNNRPPIKEISLSIAXXXXXXXXXXXXFFMAYNHIGGD 272
           MAYVDHAFSISDEDIMME SYIV+NRPPIKEI+L++A              M YN +GGD
Sbjct: 1   MAYVDHAFSISDEDIMMETSYIVHNRPPIKEIALAVALLVFGTLGIILGILMVYNRVGGD 60

Query: 273 TTHGIFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 401
             HG+FFA+LGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103


>ref|NP_194714.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4914409|emb|CAB43660.1| putative protein [Arabidopsis
           thaliana] gi|7269884|emb|CAB79743.1| putative protein
           [Arabidopsis thaliana] gi|88900368|gb|ABD57496.1|
           At4g29850 [Arabidopsis thaliana]
           gi|332660285|gb|AEE85685.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 103

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/103 (73%), Positives = 84/103 (81%)
 Frame = +3

Query: 93  MAYVDHAFSISDEDIMMEPSYIVNNRPPIKEISLSIAXXXXXXXXXXXXFFMAYNHIGGD 272
           MAYVDHAFSI+DEDIM+E SY VNNRPP+KEI+L++A            FFMAYN +GGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 273 TTHGIFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 401
             HGIFF VLG +LFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103


>ref|XP_003610004.1| hypothetical protein MTR_4g126790 [Medicago truncatula]
           gi|355511059|gb|AES92201.1| hypothetical protein
           MTR_4g126790 [Medicago truncatula]
           gi|388503578|gb|AFK39855.1| unknown [Medicago
           truncatula]
          Length = 102

 Score =  161 bits (407), Expect = 6e-38
 Identities = 74/101 (73%), Positives = 83/101 (82%)
 Frame = +3

Query: 99  YVDHAFSISDEDIMMEPSYIVNNRPPIKEISLSIAXXXXXXXXXXXXFFMAYNHIGGDTT 278
           YVDHAFSISDED+MME SY  NN+PPIKEI+L++A              MAYNH+GGDT 
Sbjct: 2   YVDHAFSISDEDMMMETSYTANNKPPIKEIALAVALLVFGTLGIIIGSLMAYNHVGGDTA 61

Query: 279 HGIFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 401
           HG+FFA+LG+ILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 62  HGLFFAILGSILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 102


>ref|NP_001237830.1| uncharacterized protein LOC100527046 [Glycine max]
           gi|255631438|gb|ACU16086.1| unknown [Glycine max]
          Length = 102

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/101 (75%), Positives = 82/101 (81%)
 Frame = +3

Query: 99  YVDHAFSISDEDIMMEPSYIVNNRPPIKEISLSIAXXXXXXXXXXXXFFMAYNHIGGDTT 278
           YVDHAFSISDEDIMM  SY VNN+PPIKEI+L+++              MAYNH+GGDT 
Sbjct: 2   YVDHAFSISDEDIMMGTSYTVNNKPPIKEIALAVSLLVCGVLGIVIGSLMAYNHVGGDTA 61

Query: 279 HGIFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 401
           HGIFFAVLG ILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 62  HGIFFAVLGFILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 102


>gb|ACJ85923.1| unknown [Medicago truncatula] gi|388505964|gb|AFK41048.1| unknown
           [Medicago truncatula]
          Length = 103

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/103 (70%), Positives = 84/103 (81%)
 Frame = +3

Query: 93  MAYVDHAFSISDEDIMMEPSYIVNNRPPIKEISLSIAXXXXXXXXXXXXFFMAYNHIGGD 272
           MAYVDHAFSISDEDIM+  SY VNN+PP+KEI+L+++              MAYNH+GGD
Sbjct: 1   MAYVDHAFSISDEDIMIGTSYTVNNKPPVKEIALAVSLLVFGFLSIIIGSLMAYNHVGGD 60

Query: 273 TTHGIFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 401
           T HG+FFA+LG +LFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  TVHGLFFAILGMLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103


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