BLASTX nr result

ID: Coptis25_contig00013422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013422
         (1841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y su...   327   9e-87
emb|CBI39143.3| unnamed protein product [Vitis vinifera]              311   4e-82
gb|AFK37452.1| unknown [Lotus japonicus]                              307   7e-81
dbj|BAG50055.1| transcription factor CCAAT [Lotus japonicus]          306   9e-81
gb|AFK49644.1| nuclear transcription factor Y subunit A2 [Medica...   304   6e-80

>ref|XP_002263793.1| PREDICTED: nuclear transcription factor Y subunit A-10-like [Vitis
            vinifera]
          Length = 330

 Score =  327 bits (837), Expect = 9e-87
 Identities = 173/331 (52%), Positives = 221/331 (66%), Gaps = 2/331 (0%)
 Frame = -3

Query: 1578 VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSGDHPTGGNQ 1399
            +TMQT  FK+H G  HNP  Q     +VPWWSGLGSQ+VY ESF QLKS+S +HP  G+Q
Sbjct: 1    MTMQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQ 60

Query: 1398 FTVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQ--QASLARQSPQPGYQN 1225
             T + + E    D   +    N++QFTIF  + K+S   QK Q  QA+++ QS  P YQ 
Sbjct: 61   LTAIKQVELGAEDGTDKG---NSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQT 117

Query: 1224 CFELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGIL 1045
             FELG  QPMVC  YPY DQ YGV + Y     GRIMLPL++ ++DGPI+VNAKQYHGI+
Sbjct: 118  RFELGFGQPMVCVKYPYADQCYGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGII 177

Query: 1044 RRRQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKKGHSEKGVTVKENLG 865
            RRRQSRAKAELENKL + RKPY+HESRHLHA+RR RGCGGRFL K  +  K  T  + + 
Sbjct: 178  RRRQSRAKAELENKLTRARKPYMHESRHLHAMRRPRGCGGRFLKKNLNGGKCGTDMKKVD 237

Query: 864  ECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLHS 685
                S P+GS  SEVLQS+  N+N  K+  G  S L GSEVTS+YSR  L ++  +++ +
Sbjct: 238  NRQLSQPTGSQISEVLQSDGGNMNSPKEANGNLSKLLGSEVTSMYSRRYLHQFPVNNVQA 297

Query: 684  SAFHSLSNIIDSGQGISTSNRWVTAADGCCD 592
            S   +L +++D G GI   ++WV AAD  C+
Sbjct: 298  SV-DTLVDMMDRGHGIVMPSKWVAAADNRCN 327


>emb|CBI39143.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  311 bits (797), Expect = 4e-82
 Identities = 170/329 (51%), Positives = 208/329 (63%), Gaps = 2/329 (0%)
 Frame = -3

Query: 1572 MQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSGDHPTGGNQFT 1393
            MQT  FK+H G  HNP  Q     +VPWWSGLGSQ+VY ESF QLKS+S +HP  G+Q T
Sbjct: 1    MQTTYFKEHAGSAHNPTGQLSSAAAVPWWSGLGSQSVYDESFAQLKSLSMEHPGKGDQLT 60

Query: 1392 VVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQ--QASLARQSPQPGYQNCF 1219
             + + E    D   +    N++QFTIF  + K+S   QK Q  QA+++ QS  P YQ  F
Sbjct: 61   AIKQVELGAEDGTDKG---NSTQFTIFSGECKNSEDAQKPQPLQATISMQSTIPEYQTRF 117

Query: 1218 ELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGILRR 1039
            ELG  QPMVC  YPY DQ YGV + Y     GRIMLPL++ ++DGPI+VNAKQYHGI+RR
Sbjct: 118  ELGFGQPMVCVKYPYADQCYGVFSAYGHQVMGRIMLPLSLTTDDGPIYVNAKQYHGIIRR 177

Query: 1038 RQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKKGHSEKGVTVKENLGEC 859
            RQSRAKAELENKL + RKPY+HESRHLHA+RR RGCGGRFL K  +  K  T  + +   
Sbjct: 178  RQSRAKAELENKLTRARKPYMHESRHLHAMRRPRGCGGRFLKKNLNGGKCGTDMKKVDNR 237

Query: 858  HRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHLHSSA 679
              S P+GS  SEVLQS+  N+N  K+  G  S L GSEVTS+YSR    RY         
Sbjct: 238  QLSQPTGSQISEVLQSDGGNMNSPKEANGNLSKLLGSEVTSMYSR----RY--------- 284

Query: 678  FHSLSNIIDSGQGISTSNRWVTAADGCCD 592
                   +  G GI   ++WV AAD  C+
Sbjct: 285  -------LHQGHGIVMPSKWVAAADNRCN 306


>gb|AFK37452.1| unknown [Lotus japonicus]
          Length = 328

 Score =  307 bits (786), Expect = 7e-81
 Identities = 169/334 (50%), Positives = 216/334 (64%), Gaps = 4/334 (1%)
 Frame = -3

Query: 1578 VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSGDHPTGGNQ 1399
            + MQT    +H G+ HN + Q     S PWWS  GSQAVYGES  Q+K  S + P   +Q
Sbjct: 1    MAMQTANLIEHEGIAHNFVGQLSSATSAPWWSAFGSQAVYGESCGQMKPFSLEPPISVDQ 60

Query: 1398 FTVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQQASLARQSPQPGYQNCF 1219
                 +  +RG +QV  K +  T+QFTIFP D K  G  QK Q     + SP   +   F
Sbjct: 61   LAA-GKQSARGAEQVLAKGH--TAQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSR-F 116

Query: 1218 ELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGILRR 1039
            ELG +QPM+CA YPY DQFYG+ +TY    +GRIMLPLN+ +++GPI+VNAKQYHGI+RR
Sbjct: 117  ELGFSQPMICAKYPYTDQFYGLFSTYGPQISGRIMLPLNMTTDEGPIYVNAKQYHGIIRR 176

Query: 1038 RQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKK----GHSEKGVTVKEN 871
            RQSRAKA L+ K+ K RKPYLHESRHLHALRR RGCGGRFL  K    G+ + G  VK+ 
Sbjct: 177  RQSRAKAVLDRKMTKRRKPYLHESRHLHALRRPRGCGGRFLNTKVSANGNGKTGRDVKKT 236

Query: 870  LGECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHL 691
             GE  +S  SGS  S+V QSE   LN SK+  G   ++SG EVTS+YSRG  D + F+HL
Sbjct: 237  GGEQLQS--SGSQGSDVFQSEVGTLNSSKETNGSSPNVSGLEVTSMYSRGGFDTFSFNHL 294

Query: 690  HSSAFHSLSNIIDSGQGISTSNRWVTAADGCCDL 589
             SS +  L++++D G+GI  + +WV A    C+L
Sbjct: 295  GSSVY-PLADMVDCGRGIMPT-KWVAAGGNSCNL 326


>dbj|BAG50055.1| transcription factor CCAAT [Lotus japonicus]
          Length = 328

 Score =  306 bits (785), Expect = 9e-81
 Identities = 169/334 (50%), Positives = 216/334 (64%), Gaps = 4/334 (1%)
 Frame = -3

Query: 1578 VTMQTVCFKDHGGLFHNPIVQQLPLPSVPWWSGLGSQAVYGESFVQLKSVSGDHPTGGNQ 1399
            + MQT    +H G+ HN + Q     S PWWS  GSQAVYGES  Q+K  S + P   +Q
Sbjct: 1    MAMQTANLIEHEGIAHNFVGQLSSATSAPWWSAFGSQAVYGESCGQMKPFSLEPPISVDQ 60

Query: 1398 FTVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQQASLARQSPQPGYQNCF 1219
                 +  +RG +QV  K +  T+QFTIFP D K  G  QK Q     + SP   +   F
Sbjct: 61   LAA-GKQSARGAEQVLAKGH--TTQFTIFPDDCKVLGNAQKPQTTISLQSSPTDTHSR-F 116

Query: 1218 ELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYHGILRR 1039
            ELG +QPM+CA YPY DQFYG+ +TY    +GRIMLPLN+ +++GPI+VNAKQYHGI+RR
Sbjct: 117  ELGFSQPMICAKYPYTDQFYGLFSTYGPQISGRIMLPLNLTTDEGPIYVNAKQYHGIIRR 176

Query: 1038 RQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKK----GHSEKGVTVKEN 871
            RQSRAKA L+ K+ K RKPYLHESRHLHALRR RGCGGRFL  K    G+ + G  VK+ 
Sbjct: 177  RQSRAKAVLDRKMTKRRKPYLHESRHLHALRRPRGCGGRFLNTKVSANGNGKTGRDVKKT 236

Query: 870  LGECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRYHFDHL 691
             GE  +S  SGS  S+V QSE   LN SK+  G   ++SG EVTS+YSRG  D + F+HL
Sbjct: 237  GGEQLQS--SGSQGSDVFQSEVGTLNSSKETNGSGPNVSGLEVTSMYSRGGFDTFSFNHL 294

Query: 690  HSSAFHSLSNIIDSGQGISTSNRWVTAADGCCDL 589
             SS +  L++++D G+GI  + +WV A    C+L
Sbjct: 295  GSSVY-PLADMVDCGRGIMPT-KWVAAGGNSCNL 326


>gb|AFK49644.1| nuclear transcription factor Y subunit A2 [Medicago truncatula]
          Length = 333

 Score =  304 bits (778), Expect = 6e-80
 Identities = 172/339 (50%), Positives = 221/339 (65%), Gaps = 9/339 (2%)
 Frame = -3

Query: 1578 VTMQTVCFKDHGGLFHNPIVQQLPL-----PSVPWWSGLGSQAVYGESFVQLKSVSGDHP 1414
            + MQTV  K+H G+ HN  V QL        + PWWSG GSQ++YGES  Q+KS S + P
Sbjct: 1    MAMQTVYLKEHEGIAHN-FVGQLSSGTNNSAAAPWWSGFGSQSLYGESGGQIKSFSLEPP 59

Query: 1413 TGGNQFTVVARHESRGTDQVQEKENLNTSQFTIFPADSKDSGKEQKSQQASLARQSPQPG 1234
                     ++  +RGT+ V  K +  T+ FTIFP D K SG  QK   A ++ QS  P 
Sbjct: 60   MSVVDQLASSKQSARGTEHVFGKGH--TNHFTIFPDDFKMSGDAQKPHTA-ISLQSAVPD 116

Query: 1233 YQNCFELGLAQPMVCANYPYMDQFYGVVATYRTPATGRIMLPLNVKSEDGPIFVNAKQYH 1054
              N FELG  QPM+C  YPY DQFYG+++TY     GRIMLPLN+ S+DGPI+VNAKQY+
Sbjct: 117  TPNRFELGFGQPMICTKYPYADQFYGLISTYGPQIQGRIMLPLNMTSDDGPIYVNAKQYN 176

Query: 1053 GILRRRQSRAKAELENKLVKNRKPYLHESRHLHALRRARGCGGRFLTKK----GHSEKGV 886
            GI+RRRQSRAKA L +KL+K  KPY+HESRHLHA+RR RGCGGRFL  K    G  + G 
Sbjct: 177  GIIRRRQSRAKAVLGHKLIKRNKPYMHESRHLHAMRRPRGCGGRFLNTKKSANGDGKTGS 236

Query: 885  TVKENLGECHRSPPSGSTSSEVLQSESRNLNQSKKLYGGDSSLSGSEVTSLYSRGDLDRY 706
             V +  G+  +   SGS SSE+L+S+   LN SK+  G   ++SGSEVTSLYSRG+ D +
Sbjct: 237  KVHKFGGQ--QLQFSGSQSSELLESDVGTLNSSKETNGSSPNISGSEVTSLYSRGNHDSF 294

Query: 705  HFDHLHSSAFHSLSNIIDSGQGISTSNRWVTAADGCCDL 589
              DHL SS   S++++ID G+G+    +WV AA  CC+L
Sbjct: 295  TVDHLGSSVL-SMADMIDGGRGVIMPTKWV-AAGNCCNL 331


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