BLASTX nr result
ID: Coptis25_contig00013417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013417
(1122 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|2... 291 4e-94
ref|XP_002317932.1| predicted protein [Populus trichocarpa] gi|2... 284 1e-90
ref|XP_002511976.1| X-linked inhibitor of apoptosis protein, xia... 281 4e-89
ref|XP_002888953.1| zinc finger family protein [Arabidopsis lyra... 273 1e-87
ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256... 304 2e-80
>ref|XP_002321460.1| predicted protein [Populus trichocarpa] gi|222868456|gb|EEF05587.1|
predicted protein [Populus trichocarpa]
Length = 466
Score = 291 bits (745), Expect(3) = 4e-94
Identities = 136/188 (72%), Positives = 158/188 (84%), Gaps = 1/188 (0%)
Frame = -1
Query: 684 RQIPIPIVFCPLFLLQAAGVLFAISRLVEKTALLVDSGA-VGRYFTISSRAYDCFGFLCH 508
R IP+ ++F PLFLLQ AGVLFA S+L EK LL+ S A GRYFT SSRA+DC GFL H
Sbjct: 277 RNIPLLVLFSPLFLLQGAGVLFAASKLAEKLVLLLRSEAGTGRYFTFSSRAHDCLGFLHH 336
Query: 507 GSRLLGWWSIDEGSHEEQALLYSCGDFGYNTFCGYAPDMVKKLPKRDLLEEVWKLQAALG 328
GSRLLGWWSIDEGS EEQA LY GD YNTFCGY P++VKK+PK+DL EEVW+LQAALG
Sbjct: 337 GSRLLGWWSIDEGSQEEQARLYHMGDASYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALG 396
Query: 327 EQSAITKYTQEEYERLQNEKFLCRICFLGEINVVLLPCRHHILCSSCAEKCKKCPICRVL 148
EQ+ ITKY+Q+E+ERLQNEK LCR+CF GEI+VVLLPCRH ILCS+C E+CKKCPICRV
Sbjct: 397 EQTEITKYSQQEFERLQNEKVLCRVCFEGEISVVLLPCRHRILCSTCCERCKKCPICRVS 456
Query: 147 IEERITAY 124
+EER++ Y
Sbjct: 457 VEERLSVY 464
Score = 64.3 bits (155), Expect(3) = 4e-94
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -3
Query: 874 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLE 734
L WNG + S + + +QD MC LQ+IGGH+MKIPLI FQ LLCMHLE
Sbjct: 224 LDWNGGLMVSPEENQHQDRMCGLQDIGGHLMKIPLIGFQVLLCMHLE 270
Score = 38.5 bits (88), Expect(3) = 4e-94
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1
Query: 981 IAE*FAFLVCTKWCNPLIH 925
IAE FAFLVCTKW NP+IH
Sbjct: 189 IAECFAFLVCTKWSNPVIH 207
>ref|XP_002317932.1| predicted protein [Populus trichocarpa] gi|222858605|gb|EEE96152.1|
predicted protein [Populus trichocarpa]
Length = 467
Score = 284 bits (727), Expect(3) = 1e-90
Identities = 134/188 (71%), Positives = 155/188 (82%), Gaps = 1/188 (0%)
Frame = -1
Query: 684 RQIPIPIVFCPLFLLQAAGVLFAISRLVEKTALLVDSGA-VGRYFTISSRAYDCFGFLCH 508
R +P ++F PLFLLQ AGVLFA S+L EK LL+ S A GRYF SSRA+DC GFL H
Sbjct: 278 RNLPFLVLFSPLFLLQGAGVLFAASKLAEKLILLLRSEAGTGRYFRFSSRAHDCLGFLHH 337
Query: 507 GSRLLGWWSIDEGSHEEQALLYSCGDFGYNTFCGYAPDMVKKLPKRDLLEEVWKLQAALG 328
GSRLLGWWSIDEGS EEQA LY GD GYNTFCGY P++VKK+PK+DL EEVW+LQAALG
Sbjct: 338 GSRLLGWWSIDEGSREEQARLYHGGDAGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALG 397
Query: 327 EQSAITKYTQEEYERLQNEKFLCRICFLGEINVVLLPCRHHILCSSCAEKCKKCPICRVL 148
EQ+ ITKY+Q+E+ERL NEK LCR+CF GEI+VVLLPCRH ILCS+C EKCKKCPICRV
Sbjct: 398 EQTEITKYSQQEFERLTNEKVLCRVCFEGEISVVLLPCRHRILCSTCCEKCKKCPICRVS 457
Query: 147 IEERITAY 124
+EE ++ Y
Sbjct: 458 VEECLSVY 465
Score = 60.5 bits (145), Expect(3) = 1e-90
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = -3
Query: 874 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLE 734
L WNG + S + + +QD MC LQ IGGHIMKIPLI FQ LL MHLE
Sbjct: 225 LDWNGGLMVSPEENQHQDRMCGLQEIGGHIMKIPLIGFQVLLFMHLE 271
Score = 37.7 bits (86), Expect(3) = 1e-90
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1
Query: 981 IAE*FAFLVCTKWCNPLIH 925
IAE FAFLVCTKW NP IH
Sbjct: 189 IAEFFAFLVCTKWSNPAIH 207
>ref|XP_002511976.1| X-linked inhibitor of apoptosis protein, xiap, putative [Ricinus
communis] gi|223549156|gb|EEF50645.1| X-linked inhibitor
of apoptosis protein, xiap, putative [Ricinus communis]
Length = 409
Score = 281 bits (719), Expect(3) = 4e-89
Identities = 134/188 (71%), Positives = 154/188 (81%), Gaps = 1/188 (0%)
Frame = -1
Query: 684 RQIPIPIVFCPLFLLQAAGVLFAISRLVEKTALLVDSGA-VGRYFTISSRAYDCFGFLCH 508
R IP+PI+F PLFLLQ A VLFA S+LVEK LL+ + A G YF SSRA+DC GFL H
Sbjct: 220 RNIPLPILFSPLFLLQGAAVLFAASKLVEKLVLLLRNEAGTGIYFRFSSRAHDCLGFLHH 279
Query: 507 GSRLLGWWSIDEGSHEEQALLYSCGDFGYNTFCGYAPDMVKKLPKRDLLEEVWKLQAALG 328
GSRLLGWWSIDEGS EEQA LY G GYNTFCGY P++VKK+PK+DL EEVW+LQAALG
Sbjct: 280 GSRLLGWWSIDEGSREEQARLYHEGASGYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALG 339
Query: 327 EQSAITKYTQEEYERLQNEKFLCRICFLGEINVVLLPCRHHILCSSCAEKCKKCPICRVL 148
EQ+ ITK++Q+E+ERLQNEK LCR+CF EI+VVLLPCRH ILCS C EKCKKCPICR+
Sbjct: 340 EQTEITKFSQQEFERLQNEKVLCRVCFEREISVVLLPCRHRILCSMCCEKCKKCPICRIS 399
Query: 147 IEERITAY 124
IEER+ Y
Sbjct: 400 IEERLPVY 407
Score = 57.8 bits (138), Expect(3) = 4e-89
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -3
Query: 874 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLE 734
L WN + S + ++D +C LQ+IGGH+MKIPL+ FQ LLCMHLE
Sbjct: 167 LDWNSGLVVSPDENQHEDRICGLQDIGGHLMKIPLVGFQVLLCMHLE 213
Score = 38.5 bits (88), Expect(3) = 4e-89
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1
Query: 981 IAE*FAFLVCTKWCNPLIH 925
IAE FAFLVCTKW NP+IH
Sbjct: 131 IAECFAFLVCTKWSNPVIH 149
>ref|XP_002888953.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334794|gb|EFH65212.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 467
Score = 273 bits (698), Expect(3) = 1e-87
Identities = 125/190 (65%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
Frame = -1
Query: 690 SVRQIPIPIVFCPLFLLQAAGVLFAISRLVEKTALLV-DSGAVGRYFTISSRAYDCFGFL 514
+ + IP+P++F PLFLLQ GVLFA S+L+EK LL+ G YF SSRA+DC GFL
Sbjct: 276 AAKYIPVPVLFSPLFLLQGVGVLFAASKLIEKVVLLMRGEDDAGLYFRFSSRAHDCLGFL 335
Query: 513 CHGSRLLGWWSIDEGSHEEQALLYSCGDFGYNTFCGYAPDMVKKLPKRDLLEEVWKLQAA 334
HGSRLLGWWSIDEGS EEQA LY D GYNTFCG+ P++VKK+PK++L EEVW+LQAA
Sbjct: 336 HHGSRLLGWWSIDEGSREEQARLYFDQDSGYNTFCGHPPEIVKKMPKKELAEEVWRLQAA 395
Query: 333 LGEQSAITKYTQEEYERLQNEKFLCRICFLGEINVVLLPCRHHILCSSCAEKCKKCPICR 154
LGEQ+ ITK++Q+EYERLQNEK LCR+CF EI+VVLLPCRH +LC +C++KCKKCP CR
Sbjct: 396 LGEQTEITKFSQQEYERLQNEKVLCRVCFEREISVVLLPCRHRVLCRNCSDKCKKCPFCR 455
Query: 153 VLIEERITAY 124
+ IEER+ Y
Sbjct: 456 INIEERLPVY 465
Score = 60.8 bits (146), Expect(3) = 1e-87
Identities = 30/47 (63%), Positives = 33/47 (70%)
Frame = -3
Query: 874 LCWNGSSLFSSKMDPNQDGMCVLQNIGGHIMKIPLIVFQDLLCMHLE 734
L WN S+ D NQD C LQ+ GGHIMKIPLIVFQ +LCMHLE
Sbjct: 225 LDWNSGLGVFSEDDRNQDTTCGLQDFGGHIMKIPLIVFQVVLCMHLE 271
Score = 38.5 bits (88), Expect(3) = 1e-87
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1
Query: 981 IAE*FAFLVCTKWCNPLIH 925
IAE FAFLVCTKW NP+IH
Sbjct: 189 IAECFAFLVCTKWSNPVIH 207
>ref|XP_002273782.1| PREDICTED: uncharacterized protein LOC100256061 [Vitis vinifera]
gi|297734166|emb|CBI15413.3| unnamed protein product
[Vitis vinifera]
Length = 466
Score = 304 bits (779), Expect = 2e-80
Identities = 165/290 (56%), Positives = 197/290 (67%), Gaps = 4/290 (1%)
Frame = -1
Query: 981 IAE*FAFLVCTKWCNPLIHGQDY---CXXXXXXXXXXXXSAGMVVHYSLQRWIPTRMECV 811
IAE FAFLVCTKW NP+IH + ++G+VV + +
Sbjct: 189 IAESFAFLVCTKWSNPVIHRNSHTTEAGSSSTTIRYLDWNSGLVVSTDEDQH---QDRMC 245
Query: 810 SCRTLVGIS*KFH*LCFKTYFVCI*XXXXXXXXXXXXXXXSVRQIPIPIVFCPLFLLQAA 631
+ + G K + F+ +C+ + R IPIP++F P+FLLQ A
Sbjct: 246 GLQDIGGHIMKVPLIGFQV-LLCM---------RLEGTPAAARDIPIPVLFSPIFLLQGA 295
Query: 630 GVLFAISRLVEKTALLVDSGA-VGRYFTISSRAYDCFGFLCHGSRLLGWWSIDEGSHEEQ 454
GVLF+ SRLVEK LL+ +GA GRYFT SSRA+DCFGFL HGSRLLGWWSIDEGS EEQ
Sbjct: 296 GVLFSASRLVEKIVLLLHNGAGTGRYFTYSSRAHDCFGFLHHGSRLLGWWSIDEGSREEQ 355
Query: 453 ALLYSCGDFGYNTFCGYAPDMVKKLPKRDLLEEVWKLQAALGEQSAITKYTQEEYERLQN 274
A L G GYNTFCGY P++VKK+PK+DL EEVW+LQAALGEQS ITKY+++EYERLQN
Sbjct: 356 ARLVHDGA-GYNTFCGYPPEIVKKMPKKDLAEEVWRLQAALGEQSEITKYSKQEYERLQN 414
Query: 273 EKFLCRICFLGEINVVLLPCRHHILCSSCAEKCKKCPICRVLIEERITAY 124
EK LCRICF GEI+VVLLPCRH ILCS+C EKCKKCPICRV IEER+ Y
Sbjct: 415 EKILCRICFEGEISVVLLPCRHRILCSTCCEKCKKCPICRVPIEERLPVY 464