BLASTX nr result

ID: Coptis25_contig00013411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013411
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256...   233   4e-59
gb|ABK23005.1| unknown [Picea sitchensis]                             226   3e-57
gb|AFK41697.1| unknown [Medicago truncatula]                          225   7e-57
ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260...   225   7e-57

>ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|222869756|gb|EEF06887.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  233 bits (595), Expect = 2e-59
 Identities = 110/144 (76%), Positives = 125/144 (86%)
 Frame = -1

Query: 609 MGTSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDS 430
           MG+SGFF+IC+LHSV+ALT G LMMFY NE ++F HGIE A KL GSTPHD LL+QT+DS
Sbjct: 1   MGSSGFFLICMLHSVMALTCGALMMFYTNEATVFGHGIEIATKLKGSTPHDQLLVQTSDS 60

Query: 429 FAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQ 250
           F+GLLL AIG  LFMV+FVKDREFQSFFAKGCV++HV  A WR YFER+LEDL+RD PR 
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHVSMAFWRIYFERKLEDLARDLPRL 120

Query: 249 VVGDILLAVSWVFFLVYSWREKYD 178
           VVGDI LA+SWVFFLVYSWREKYD
Sbjct: 121 VVGDIALALSWVFFLVYSWREKYD 144


>ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256771 [Vitis vinifera]
           gi|297735997|emb|CBI23971.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score =  233 bits (593), Expect = 4e-59
 Identities = 111/147 (75%), Positives = 130/147 (88%), Gaps = 1/147 (0%)
 Frame = -1

Query: 615 QTMGTS-GFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQT 439
           Q+MG+S GFF+ICLLHS+IALT G LMMFY+ E+  F HG ETA KLLGSTPHD LLI+T
Sbjct: 4   QSMGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIRT 63

Query: 438 TDSFAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDW 259
           +DSF+GLLL AIG  LFMV+FV+DR+FQSFFAKGC+V+HV  A+WRFYFERR+EDL+ DW
Sbjct: 64  SDSFSGLLLFAIGFLLFMVAFVRDRDFQSFFAKGCIVLHVSMALWRFYFERRVEDLALDW 123

Query: 258 PRQVVGDILLAVSWVFFLVYSWREKYD 178
            RQ+VGDILLA+SWVFFLVYSWREKYD
Sbjct: 124 LRQIVGDILLALSWVFFLVYSWREKYD 150


>gb|ABK23005.1| unknown [Picea sitchensis]
          Length = 143

 Score =  226 bits (577), Expect = 3e-57
 Identities = 102/139 (73%), Positives = 124/139 (89%)
 Frame = -1

Query: 594 FFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDSFAGLL 415
           F ++CLLHSV A+ SG LMMF+  EVSIF HG ETANKLLGSTPHD LLIQT+DS AG+L
Sbjct: 5   FSLVCLLHSVTAVVSGCLMMFFWREVSIFGHGKETANKLLGSTPHDQLLIQTSDSLAGML 64

Query: 414 LCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQVVGDI 235
           L ++G+ LFMVSFV+DREFQSFFAKGC+V+H + A+WRFYF RR+EDL+RDWPRQ+VGDI
Sbjct: 65  LFSVGIMLFMVSFVRDREFQSFFAKGCIVLHTLMALWRFYFARRVEDLARDWPRQLVGDI 124

Query: 234 LLAVSWVFFLVYSWREKYD 178
           ++++SWVFFLVY+WREKYD
Sbjct: 125 IMSLSWVFFLVYNWREKYD 143


>gb|AFK41697.1| unknown [Medicago truncatula]
          Length = 145

 Score =  225 bits (574), Expect = 7e-57
 Identities = 103/142 (72%), Positives = 123/142 (86%)
 Frame = -1

Query: 603 TSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDSFA 424
           +S FF+IC+LHS+IA+TSG LMMFY+ EV  F HG++TA KLLGSTPHD LLI+T+DSF+
Sbjct: 4   SSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSDSFS 63

Query: 423 GLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQVV 244
           GLLL AIG  LFMVSFVKDR+FQ FFAKGC ++HV  A+WR YFER++EDL+ DW RQ V
Sbjct: 64  GLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLRQTV 123

Query: 243 GDILLAVSWVFFLVYSWREKYD 178
           GD+LLA+SWVFFLVYSWREKYD
Sbjct: 124 GDVLLALSWVFFLVYSWREKYD 145


>ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260596 [Vitis vinifera]
          Length = 144

 Score =  225 bits (574), Expect = 7e-57
 Identities = 105/144 (72%), Positives = 122/144 (84%)
 Frame = -1

Query: 609 MGTSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDS 430
           MG++ FF+ C LHSVIALT G LMMFY NE+ +F HG E A KL GSTPHD LLI+T+DS
Sbjct: 1   MGSAAFFLTCSLHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 429 FAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFERRLEDLSRDWPRQ 250
           F+GLLL AIG  LFMV+FVKDREFQSFFAKGCV +HV  A+WR YFER+LEDL+ DWP+Q
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQ 120

Query: 249 VVGDILLAVSWVFFLVYSWREKYD 178
           VVGDI+LA+SWVF +VYSWREKYD
Sbjct: 121 VVGDIVLALSWVFLVVYSWREKYD 144


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