BLASTX nr result

ID: Coptis25_contig00013394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013394
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3...   230   8e-59
ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3...   228   3e-58
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   226   2e-57
emb|CBI26749.3| unnamed protein product [Vitis vinifera]              226   2e-57
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]   226   2e-57

>ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1494

 Score =  230 bits (587), Expect = 8e-59
 Identities = 107/132 (81%), Positives = 119/132 (90%)
 Frame = -2

Query: 397  WYQQYYIPTARELARFVGVCKAPLIQHFSESISGLTTIRSFDQESRFMETNLKLMDSYSR 218
            WYQQYYIP+ARELAR VGVCKAP+IQHFSE+ISG +TIRSFDQ+SRF ETN+KL D YSR
Sbjct: 1078 WYQQYYIPSARELARLVGVCKAPIIQHFSETISGTSTIRSFDQQSRFQETNMKLTDGYSR 1137

Query: 217  PVFYSASAMEWLCIRLDMLSSMTFAFSLMFLISVPEGTIDPGIAGLGVTYGLNLNMIQAW 38
            P F  A AMEWLC RLDMLSS+TFAFSL+FLIS+P+G IDPG+AGL VTYGLNLNMIQAW
Sbjct: 1138 PKFNIAGAMEWLCFRLDMLSSITFAFSLVFLISIPQGFIDPGLAGLAVTYGLNLNMIQAW 1197

Query: 37   FIWNLCNLENKI 2
             IWNLCN+ENKI
Sbjct: 1198 MIWNLCNMENKI 1209


>ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1490

 Score =  228 bits (582), Expect = 3e-58
 Identities = 107/132 (81%), Positives = 118/132 (89%)
 Frame = -2

Query: 397  WYQQYYIPTARELARFVGVCKAPLIQHFSESISGLTTIRSFDQESRFMETNLKLMDSYSR 218
            WYQQYYIP+AREL+R VGVCKAP+IQHF+E+ISG +TIRSFDQ+SRF ETN+KL D YSR
Sbjct: 1074 WYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQETNMKLTDGYSR 1133

Query: 217  PVFYSASAMEWLCIRLDMLSSMTFAFSLMFLISVPEGTIDPGIAGLGVTYGLNLNMIQAW 38
            P F  A AMEWLC RLDMLSS+TFAFSL+FLIS+P G IDPGIAGL VTYGLNLNMIQAW
Sbjct: 1134 PKFNIAGAMEWLCFRLDMLSSITFAFSLIFLISIPTGIIDPGIAGLAVTYGLNLNMIQAW 1193

Query: 37   FIWNLCNLENKI 2
             IWNLCNLENKI
Sbjct: 1194 VIWNLCNLENKI 1205


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  226 bits (575), Expect = 2e-57
 Identities = 104/132 (78%), Positives = 120/132 (90%)
 Frame = -2

Query: 397  WYQQYYIPTARELARFVGVCKAPLIQHFSESISGLTTIRSFDQESRFMETNLKLMDSYSR 218
            WYQ+YYI +ARELAR VGVCKAP+IQHFSE+ISG TTIRSFDQESRF +TN+KL+D Y+R
Sbjct: 1076 WYQRYYISSARELARLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLIDGYTR 1135

Query: 217  PVFYSASAMEWLCIRLDMLSSMTFAFSLMFLISVPEGTIDPGIAGLGVTYGLNLNMIQAW 38
            P F SA+AMEWLC RLD+LSS+TFAFSL+FLIS+PEG IDPGIAGL VTYGLNLN +QAW
Sbjct: 1136 PKFNSAAAMEWLCFRLDVLSSITFAFSLVFLISIPEGAIDPGIAGLAVTYGLNLNTLQAW 1195

Query: 37   FIWNLCNLENKI 2
             +WNLCN+ENKI
Sbjct: 1196 VVWNLCNMENKI 1207


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score =  226 bits (575), Expect = 2e-57
 Identities = 104/132 (78%), Positives = 120/132 (90%)
 Frame = -2

Query: 397  WYQQYYIPTARELARFVGVCKAPLIQHFSESISGLTTIRSFDQESRFMETNLKLMDSYSR 218
            WYQ+YYI +ARELAR VGVCKAP+IQHFSE+ISG TTIRSFDQESRF +TN+KL+D Y+R
Sbjct: 860  WYQRYYISSARELARLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLIDGYTR 919

Query: 217  PVFYSASAMEWLCIRLDMLSSMTFAFSLMFLISVPEGTIDPGIAGLGVTYGLNLNMIQAW 38
            P F SA+AMEWLC RLD+LSS+TFAFSL+FLIS+PEG IDPGIAGL VTYGLNLN +QAW
Sbjct: 920  PKFNSAAAMEWLCFRLDVLSSITFAFSLVFLISIPEGAIDPGIAGLAVTYGLNLNTLQAW 979

Query: 37   FIWNLCNLENKI 2
             +WNLCN+ENKI
Sbjct: 980  VVWNLCNMENKI 991


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score =  226 bits (575), Expect = 2e-57
 Identities = 104/132 (78%), Positives = 120/132 (90%)
 Frame = -2

Query: 397  WYQQYYIPTARELARFVGVCKAPLIQHFSESISGLTTIRSFDQESRFMETNLKLMDSYSR 218
            WYQ+YYI +ARELAR VGVCKAP+IQHFSE+ISG TTIRSFDQESRF +TN+KL+D Y+R
Sbjct: 1049 WYQRYYISSARELARLVGVCKAPVIQHFSETISGSTTIRSFDQESRFRDTNMKLIDGYTR 1108

Query: 217  PVFYSASAMEWLCIRLDMLSSMTFAFSLMFLISVPEGTIDPGIAGLGVTYGLNLNMIQAW 38
            P F SA+AMEWLC RLD+LSS+TFAFSL+FLIS+PEG IDPGIAGL VTYGLNLN +QAW
Sbjct: 1109 PKFNSAAAMEWLCFRLDVLSSITFAFSLVFLISIPEGAIDPGIAGLAVTYGLNLNTLQAW 1168

Query: 37   FIWNLCNLENKI 2
             +WNLCN+ENKI
Sbjct: 1169 VVWNLCNMENKI 1180


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