BLASTX nr result

ID: Coptis25_contig00013393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013393
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    65   7e-09
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...    56   3e-06

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
 Frame = +2

Query: 11  SRDELIRWARDLGKSIGMVVVIKRSDVGSSGRV-PRVFMACERFG-------KKSEHPFT 166
           SR+ LI W R+ GK  GMV++I+R+D+G++ R  PR+   CER G        K E    
Sbjct: 15  SREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGAYRHTGXDKGEEGKK 74

Query: 167 KKAQKM--SKGFNCPFLLRGLKMPKDD 241
           K+ +K   +K   CPF LRG+K+P  D
Sbjct: 75  KRKRKATGTKKCGCPFSLRGIKLPLAD 101


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
 Frame = +2

Query: 2   VFNSRDELIRWARDLGKSIGMVVVIKRSDVGS----SGRVPRVFMACERFGKKSEHPFTK 169
           VF +R+ L+ WAR +G+  G  V+I+RSD G      GR   V + CER GK  ++    
Sbjct: 509 VFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQYKDAL 568

Query: 170 KAQKMSKGFNCPFLLRGLKMPKDD 241
             +  +K   CPF LRG  +   D
Sbjct: 569 ARKTGTKKCGCPFRLRGRPVRNGD 592


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