BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013388
         (1833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   699   0.0  
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   699   0.0  
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,...   672   0.0  
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|2...   672   0.0  
ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi...   671   0.0  

>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
            [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
            protein product [Vitis vinifera]
          Length = 821

 Score =  699 bits (1805), Expect = 0.0
 Identities = 337/457 (73%), Positives = 397/457 (86%)
 Frame = -3

Query: 1372 SLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLF 1193
            S+EFLS KGK LLN I+ +P+  L  FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF
Sbjct: 99   SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLF 158

Query: 1192 QWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLH 1013
            +W   N  S N  ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LH
Sbjct: 159  KWAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILH 217

Query: 1012 AYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLE 833
            AY+R GKYERAI++FE ++  GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+NGLE
Sbjct: 218  AYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLE 277

Query: 832  FDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHI 653
            FDEFTCSTVISACGREG+L+EA KFF  +KS+GYV GT TYN+LL V+GKAGIY+EAL I
Sbjct: 278  FDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSI 337

Query: 652  LDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGK 473
            L EME+N CPPD VT+NELV+AYV+AGF EEGA  IDTM  KGI PNAITYTTVI+AYGK
Sbjct: 338  LKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGK 397

Query: 472  AGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPNRIT 293
            AGKEDKALS F QMKE GCVPNVCTYNAILGMLGKKSR EEM+ +LC+M+SNGC PN +T
Sbjct: 398  AGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVT 457

Query: 292  WNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYDEMI 113
            WNTMLAMCGNKG  KYVNRVFREMK+CGFEP+RDTFN LI AYGRCGS ID +KMY+EMI
Sbjct: 458  WNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMI 517

Query: 112  RVGFSPSVTTYNSLLNALARRGDWKAAEAVILDMKSK 2
            + GF+P VTTYN+LLNALARRGDW+AAE+VILDMKSK
Sbjct: 518  KAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSK 554



 Score =  184 bits (467), Expect = 7e-44
 Identities = 129/440 (29%), Positives = 209/440 (47%), Gaps = 43/440 (9%)
 Frame = -3

Query: 1219 NWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLD 1040
            +W+K + L   + SN         ++     +I   GRE     A K F  +  E Y   
Sbjct: 260  SWNKILGLLDEMRSNG-----LEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAG 314

Query: 1039 VRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELL 860
              ++ S+L  + + G Y  A+S+ + ++     P LVTYN ++  Y + G    +  + +
Sbjct: 315  TFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFH-EEGADFI 373

Query: 859  DEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKA 680
            D +   G+  +  T +TVI+A G+ G  ++AL FF +MK  G VP   TYNA+L + GK 
Sbjct: 374  DTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKK 433

Query: 679  GIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITY 500
                E + +L +M  N C P++VT+N +++     G  +    V   M S G  PN  T+
Sbjct: 434  SRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTF 493

Query: 499  TTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNMKS 320
              +I AYG+ G +   + ++ +M + G  P V TYNA+L  L ++   E   S++ +MKS
Sbjct: 494  NALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS 553

Query: 319  NGCVPNRITWNTML---AMCGN-KGAQKY------------------------------- 245
             G  PN  +++ ML   A  GN +G +K                                
Sbjct: 554  KGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMG 613

Query: 244  VNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYD---EMIRV----GFSPSVT 86
            + R F+E    G++PD   FN+++S + +        KMYD   EM+R+    G  P + 
Sbjct: 614  MERAFQEFCKHGYKPDLVLFNSMLSIFAK-------NKMYDRAHEMLRLIRESGLQPDLV 666

Query: 85   TYNSLLNALARRGD-WKAAE 29
            TYNSL++  AR G+ WK  E
Sbjct: 667  TYNSLMDMYARGGECWKGEE 686



 Score =  162 bits (409), Expect = 4e-37
 Identities = 113/466 (24%), Positives = 220/466 (47%), Gaps = 3/466 (0%)
 Frame = -3

Query: 1399 SGVAFGDGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVV---SLLKGLE 1229
            +G+ F +      +SA G+  L       + E + FF  ++SE          SLL+   
Sbjct: 274  NGLEFDEFTCSTVISACGREGL-------LDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326

Query: 1228 ISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDY 1049
             +G +S+A+ + + +  N+   +    N+ V   +     R   H       D +  +  
Sbjct: 327  KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV-----RAGFHEEGADFIDTMIRKGI 381

Query: 1048 SLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKIL 869
              +  ++T+V++AY + GK ++A+S F  +K  G  P + TYN +L + GK  R   +++
Sbjct: 382  MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRL-EEMI 440

Query: 868  ELLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVY 689
            ++L ++R+NG   +  T +T+++ CG +GM +   + F EMKS G+ P   T+NAL+  Y
Sbjct: 441  DMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY 500

Query: 688  GKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNA 509
            G+ G   + + + +EM +    P   T+N L++A  + G  E   +VI  M SKG  PN 
Sbjct: 501  GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNE 560

Query: 508  ITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCN 329
             +Y+ +++ Y K G       +  ++      P+      ++    K+     M      
Sbjct: 561  TSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQE 620

Query: 328  MKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGS 149
               +G  P+ + +N+ML++          + + R ++  G +PD  T+N+L+  Y R G 
Sbjct: 621  FCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGE 680

Query: 148  GIDALKMYDEMIRVGFSPSVTTYNSLLNALARRGDWKAAEAVILDM 11
                 ++   + + G  P + +YN+++    R+G  + A   + +M
Sbjct: 681  CWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726



 Score =  105 bits (262), Expect = 4e-20
 Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 34/308 (11%)
 Frame = -3

Query: 1147 NDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLF 968
            N      +I   GR        K+++ +    ++  V ++ ++L+A AR G +E A S+ 
Sbjct: 489  NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548

Query: 967  EAIKAKGLKPTLVTYNVMLDVYGKMGR------------------SWNKILELL------ 860
              +K+KG KP   +Y++ML+ Y K G                   SW  +  L+      
Sbjct: 549  LDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR 608

Query: 859  ----------DEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTY 710
                       E   +G + D    ++++S   +  M + A +    ++  G  P  VTY
Sbjct: 609  RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668

Query: 709  NALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTS 530
            N+L+ +Y + G   +   IL  ++++   PD V++N ++  + + G ++E    +  MT 
Sbjct: 669  NSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTI 728

Query: 529  KGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEE 350
             GI P  +TY T +  Y   G   +   +   M +  C PN  TY  ++    K  + +E
Sbjct: 729  SGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKE 788

Query: 349  MMSILCNM 326
             M  + N+
Sbjct: 789  AMDFVSNI 796



 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 53/183 (28%), Positives = 88/183 (48%)
 Frame = -3

Query: 970  FEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACG 791
            F+     G KP LV +N ML ++ K  + +++  E+L  IR +GL+ D  T ++++    
Sbjct: 618  FQEFCKHGYKPDLVLFNSMLSIFAK-NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYA 676

Query: 790  REGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAV 611
            R G   +  +    ++  G  P  V+YN ++  + + G+  EA+  L EM  +   P  V
Sbjct: 677  RGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIV 736

Query: 610  TFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQM 431
            T+N  V+ Y   G   E   VI  M      PN +TY  V+D Y K  K  +A+     +
Sbjct: 737  TYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796

Query: 430  KEL 422
             E+
Sbjct: 797  TEM 799


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  699 bits (1805), Expect = 0.0
 Identities = 337/457 (73%), Positives = 397/457 (86%)
 Frame = -3

Query: 1372 SLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLF 1193
            S+EFLS KGK LLN I+ +P+  L  FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF
Sbjct: 99   SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLF 158

Query: 1192 QWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLH 1013
            +W   N  S N  ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LH
Sbjct: 159  KWAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILH 217

Query: 1012 AYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLE 833
            AY+R GKYERAI++FE ++  GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+NGLE
Sbjct: 218  AYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLE 277

Query: 832  FDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHI 653
            FDEFTCSTVISACGREG+L+EA KFF  +KS+GYV GT TYN+LL V+GKAGIY+EAL I
Sbjct: 278  FDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSI 337

Query: 652  LDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGK 473
            L EME+N CPPD VT+NELV+AYV+AGF EEGA  IDTM  KGI PNAITYTTVI+AYGK
Sbjct: 338  LKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGK 397

Query: 472  AGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPNRIT 293
            AGKEDKALS F QMKE GCVPNVCTYNAILGMLGKKSR EEM+ +LC+M+SNGC PN +T
Sbjct: 398  AGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVT 457

Query: 292  WNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYDEMI 113
            WNTMLAMCGNKG  KYVNRVFREMK+CGFEP+RDTFN LI AYGRCGS ID +KMY+EMI
Sbjct: 458  WNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMI 517

Query: 112  RVGFSPSVTTYNSLLNALARRGDWKAAEAVILDMKSK 2
            + GF+P VTTYN+LLNALARRGDW+AAE+VILDMKSK
Sbjct: 518  KAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSK 554



 Score =  184 bits (467), Expect = 7e-44
 Identities = 129/440 (29%), Positives = 209/440 (47%), Gaps = 43/440 (9%)
 Frame = -3

Query: 1219 NWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLD 1040
            +W+K + L   + SN         ++     +I   GRE     A K F  +  E Y   
Sbjct: 260  SWNKILGLLDEMRSNG-----LEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAG 314

Query: 1039 VRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELL 860
              ++ S+L  + + G Y  A+S+ + ++     P LVTYN ++  Y + G    +  + +
Sbjct: 315  TFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFH-EEGADFI 373

Query: 859  DEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKA 680
            D +   G+  +  T +TVI+A G+ G  ++AL FF +MK  G VP   TYNA+L + GK 
Sbjct: 374  DTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKK 433

Query: 679  GIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITY 500
                E + +L +M  N C P++VT+N +++     G  +    V   M S G  PN  T+
Sbjct: 434  SRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTF 493

Query: 499  TTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNMKS 320
              +I AYG+ G +   + ++ +M + G  P V TYNA+L  L ++   E   S++ +MKS
Sbjct: 494  NALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS 553

Query: 319  NGCVPNRITWNTML---AMCGN-KGAQKY------------------------------- 245
             G  PN  +++ ML   A  GN +G +K                                
Sbjct: 554  KGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMG 613

Query: 244  VNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYD---EMIRV----GFSPSVT 86
            + R F+E    G++PD   FN+++S + +        KMYD   EM+R+    G  P + 
Sbjct: 614  MERAFQEFCKHGYKPDLVLFNSMLSIFAK-------NKMYDRAHEMLRLIRESGLQPDLV 666

Query: 85   TYNSLLNALARRGD-WKAAE 29
            TYNSL++  AR G+ WK  E
Sbjct: 667  TYNSLMDMYARGGECWKGEE 686



 Score =  162 bits (409), Expect = 4e-37
 Identities = 113/466 (24%), Positives = 220/466 (47%), Gaps = 3/466 (0%)
 Frame = -3

Query: 1399 SGVAFGDGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVV---SLLKGLE 1229
            +G+ F +      +SA G+  L       + E + FF  ++SE          SLL+   
Sbjct: 274  NGLEFDEFTCSTVISACGREGL-------LDEARKFFARLKSEGYVAGTFTYNSLLQVFG 326

Query: 1228 ISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDY 1049
             +G +S+A+ + + +  N+   +    N+ V   +     R   H       D +  +  
Sbjct: 327  KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV-----RAGFHEEGADFIDTMIRKGI 381

Query: 1048 SLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKIL 869
              +  ++T+V++AY + GK ++A+S F  +K  G  P + TYN +L + GK  R   +++
Sbjct: 382  MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRL-EEMI 440

Query: 868  ELLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVY 689
            ++L ++R+NG   +  T +T+++ CG +GM +   + F EMKS G+ P   T+NAL+  Y
Sbjct: 441  DMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAY 500

Query: 688  GKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNA 509
            G+ G   + + + +EM +    P   T+N L++A  + G  E   +VI  M SKG  PN 
Sbjct: 501  GRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNE 560

Query: 508  ITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCN 329
             +Y+ +++ Y K G       +  ++      P+      ++    K+     M      
Sbjct: 561  TSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQE 620

Query: 328  MKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGS 149
               +G  P+ + +N+ML++          + + R ++  G +PD  T+N+L+  Y R G 
Sbjct: 621  FCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGE 680

Query: 148  GIDALKMYDEMIRVGFSPSVTTYNSLLNALARRGDWKAAEAVILDM 11
                 ++   + + G  P + +YN+++    R+G  + A   + +M
Sbjct: 681  CWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726



 Score =  105 bits (262), Expect = 4e-20
 Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 34/308 (11%)
 Frame = -3

Query: 1147 NDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLF 968
            N      +I   GR        K+++ +    ++  V ++ ++L+A AR G +E A S+ 
Sbjct: 489  NRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVI 548

Query: 967  EAIKAKGLKPTLVTYNVMLDVYGKMGR------------------SWNKILELL------ 860
              +K+KG KP   +Y++ML+ Y K G                   SW  +  L+      
Sbjct: 549  LDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKR 608

Query: 859  ----------DEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTY 710
                       E   +G + D    ++++S   +  M + A +    ++  G  P  VTY
Sbjct: 609  RALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTY 668

Query: 709  NALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTS 530
            N+L+ +Y + G   +   IL  ++++   PD V++N ++  + + G ++E    +  MT 
Sbjct: 669  NSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTI 728

Query: 529  KGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEE 350
             GI P  +TY T +  Y   G   +   +   M +  C PN  TY  ++    K  + +E
Sbjct: 729  SGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKE 788

Query: 349  MMSILCNM 326
             M  + N+
Sbjct: 789  AMDFVSNI 796



 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 53/183 (28%), Positives = 88/183 (48%)
 Frame = -3

Query: 970  FEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACG 791
            F+     G KP LV +N ML ++ K  + +++  E+L  IR +GL+ D  T ++++    
Sbjct: 618  FQEFCKHGYKPDLVLFNSMLSIFAK-NKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYA 676

Query: 790  REGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAV 611
            R G   +  +    ++  G  P  V+YN ++  + + G+  EA+  L EM  +   P  V
Sbjct: 677  RGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIV 736

Query: 610  TFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQM 431
            T+N  V+ Y   G   E   VI  M      PN +TY  V+D Y K  K  +A+     +
Sbjct: 737  TYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796

Query: 430  KEL 422
             E+
Sbjct: 797  TEM 799


>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  672 bits (1734), Expect = 0.0
 Identities = 321/460 (69%), Positives = 384/460 (83%)
 Frame = -3

Query: 1381 DGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVVSLLKGLEISGNWSKAV 1202
            D   LE+LS KGK +L  II  P+  L SFFDS + EL +VD++SLLK L+ SGNW KA+
Sbjct: 109  DSGFLEYLSRKGKLILGSIIEQPLHSLASFFDSSKYELLQVDLISLLKALDYSGNWEKAL 168

Query: 1201 LLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTS 1022
            LLF+W   N    N  +++   IE+M+RILGRESQH++A KLFD +P++DY LDVR++T+
Sbjct: 169  LLFEWSVLNLGIAN-EKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTT 227

Query: 1021 VLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNN 842
            +LHAY+RTGKY RAI +FE +   GL P+LVTYNVMLDVYGKMGRSW+KILELLDE+R+ 
Sbjct: 228  ILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSR 287

Query: 841  GLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEA 662
            GL+FDEFTCSTV+SACGREG+++EA +FF  +KS+GY PGTVTYNALLHV+GKAGI++EA
Sbjct: 288  GLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEA 347

Query: 661  LHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDA 482
            L +L EME N CPPDAVT+NE+V+AYV+AGF EEGA VID M SKGI PNA+TYTT+I+A
Sbjct: 348  LSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINA 407

Query: 481  YGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPN 302
            YG+ G  DKAL +F QM ELGCVPNV TYNA+LGMLGKKS SEEMM IL +MK NGC PN
Sbjct: 408  YGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPN 467

Query: 301  RITWNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYD 122
             ITWNTMLAMCG KG  KYVN+VFREMKNCGFEPDRDTFNTLISAYGRCGS  DA KM++
Sbjct: 468  HITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHE 527

Query: 121  EMIRVGFSPSVTTYNSLLNALARRGDWKAAEAVILDMKSK 2
            EMI+ GFSP + TYN+LLNALARRGDWKAAE+VILDM++K
Sbjct: 528  EMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNK 567



 Score =  166 bits (419), Expect = 3e-38
 Identities = 112/406 (27%), Positives = 198/406 (48%), Gaps = 43/406 (10%)
 Frame = -3

Query: 1111 GRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTL 932
            GRE     A + F  +  E Y     ++ ++LH + + G +  A+S+   ++     P  
Sbjct: 304  GREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDA 363

Query: 931  VTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFD 752
            VTYN ++  Y + G      + ++D + + G+  +  T +T+I+A GR G +++AL+ FD
Sbjct: 364  VTYNEVVAAYVRAGFHEEGAV-VIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFD 422

Query: 751  EMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAG 572
            +M   G VP   TYNA+L + GK  +  E + IL  M+ N C P+ +T+N +++   K G
Sbjct: 423  QMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKG 482

Query: 571  FIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYN 392
              +    V   M + G  P+  T+ T+I AYG+ G  + A  +  +M + G  P + TYN
Sbjct: 483  MHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYN 542

Query: 391  AILGMLGKKSRSEEMMSILCNMKSNGCVPNRITWNTML---AMCGN-KGAQKY------- 245
            A+L  L ++   +   S++ +M++ G  P+  +++ M+   A  GN KG +         
Sbjct: 543  ALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDG 602

Query: 244  ------------------------VNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDA 137
                                    + R F+ ++  G++PD    N+++S + +       
Sbjct: 603  DIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAK------- 655

Query: 136  LKMYD---EMIRV----GFSPSVTTYNSLLNALARRGD-WKAAEAV 23
              MYD   EM+R+    G  P + T+NSL++  AR GD WKA E +
Sbjct: 656  NNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVL 701



 Score =  150 bits (380), Expect = 8e-34
 Identities = 109/467 (23%), Positives = 218/467 (46%), Gaps = 3/467 (0%)
 Frame = -3

Query: 1396 GVAFGDGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVVS---LLKGLEI 1226
            G+ F +      LSA G+  L       I E + FF  ++SE  +   V+   LL     
Sbjct: 288  GLDFDEFTCSTVLSACGREGL-------IDEAREFFSGLKSEGYKPGTVTYNALLHVFGK 340

Query: 1225 SGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYS 1046
            +G +S+A+ +   +  N+   +    N+ V   +     R   H     + DA+  +   
Sbjct: 341  AGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYV-----RAGFHEEGAVVIDAMASKGIM 395

Query: 1045 LDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILE 866
             +  ++T++++AY R G  ++A+ +F+ +   G  P + TYN +L + GK   S  ++++
Sbjct: 396  PNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLS-EEMMK 454

Query: 865  LLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYG 686
            +L  ++ NG   +  T +T+++ CG++GM +   + F EMK+ G+ P   T+N L+  YG
Sbjct: 455  ILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYG 514

Query: 685  KAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAI 506
            + G   +A  + +EM +    P   T+N L++A  + G  +   +VI  M +KG  P+  
Sbjct: 515  RCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSET 574

Query: 505  TYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNM 326
            +Y+ ++ +Y K G       +   + +    P+      ++    K      M      +
Sbjct: 575  SYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQAL 634

Query: 325  KSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSG 146
            + +G  P+ +  N+ML++          + + R + + G +PD  T N+L+  Y R G  
Sbjct: 635  QKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDC 694

Query: 145  IDALKMYDEMIRVGFSPSVTTYNSLLNALARRGDWKAAEAVILDMKS 5
              A ++   +   G  P + +YN+++    R+G  +    ++ +M S
Sbjct: 695  WKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTS 741



 Score =  106 bits (265), Expect = 2e-20
 Identities = 67/280 (23%), Positives = 136/280 (48%), Gaps = 1/280 (0%)
 Frame = -3

Query: 1126 MIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKG 947
            +I   GR   ++ A K+ + +    +S  + ++ ++L+A AR G ++ A S+   ++ KG
Sbjct: 509  LISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKG 568

Query: 946  LKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTC-STVISACGREGMLEE 770
             +P+  +Y++M+  Y K G    K +E++++   +G  F  +    T++ A  +   L  
Sbjct: 569  FRPSETSYSLMVHSYAKGGNV--KGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTG 626

Query: 769  ALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 590
              + F  ++  GY P  V  N++L ++ K  +Y  A  +L  +      PD VT N L+ 
Sbjct: 627  MERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMD 686

Query: 589  AYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVP 410
             Y + G   +   V+  + + G  P+ ++Y TVI  + + G   + + +  +M  +G  P
Sbjct: 687  MYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGP 746

Query: 409  NVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPNRITW 290
             + TYN  +     +    E+  ++  M  + C PN +T+
Sbjct: 747  CIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTY 786



 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 54/183 (29%), Positives = 91/183 (49%)
 Frame = -3

Query: 970  FEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACG 791
            F+A++  G KP LV  N ML ++ K    +++  E+L  I + GL+ D  T ++++    
Sbjct: 631  FQALQKHGYKPDLVLCNSMLSIFAK-NNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYA 689

Query: 790  REGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAV 611
            R G   +A +    +++ G  P  V+YN ++  + + G+  E + IL EM      P   
Sbjct: 690  RGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIF 749

Query: 610  TFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQM 431
            T+N  +S Y   G   E   VI  M      PN +TY  V D Y KA + D+A+    ++
Sbjct: 750  TYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKI 809

Query: 430  KEL 422
            K++
Sbjct: 810  KDV 812


>ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|222870547|gb|EEF07678.1|
            predicted protein [Populus trichocarpa]
          Length = 821

 Score =  672 bits (1733), Expect = 0.0
 Identities = 322/460 (70%), Positives = 389/460 (84%)
 Frame = -3

Query: 1381 DGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVVSLLKGLEISGNWSKAV 1202
            + ESLEFLS +GK LLN I   P+  L  FF+S + EL +VD++ +LK L++SG+  +A+
Sbjct: 96   ENESLEFLSKRGKLLLNSIKEQPLGGLNDFFESCKFELFQVDLIGVLKALDLSGDCERAI 155

Query: 1201 LLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTS 1022
            LLF+W+  N  + N   L++Q +E+M RILGRESQHSIA KLFD +P++DYSLDVR++T+
Sbjct: 156  LLFEWLVLNLGTGNVN-LDNQAVELMARILGRESQHSIASKLFDVIPLDDYSLDVRAYTT 214

Query: 1021 VLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNN 842
            +LH+Y+R GKYERA+++FE +   GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+ 
Sbjct: 215  ILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSK 274

Query: 841  GLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEA 662
            GL FDEFTCSTVISACGREG+L+EA +FF  +KSQGY PGTVTYNALL V+GKAGIY+EA
Sbjct: 275  GLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEA 334

Query: 661  LHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDA 482
            L I+ EME N CPPDAVT+NELV+AYV+AGF EEGAA+IDTMT  GI PNA+TYTT+I+A
Sbjct: 335  LSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINA 394

Query: 481  YGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPN 302
            YG+A + DKALSL+ QMKE GC PNVCTYNAILGMLGKKS+SEEMM ILC+MK +GC PN
Sbjct: 395  YGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPN 454

Query: 301  RITWNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYD 122
            RITWNTML+MCGNKG  KYV RVF+EMK+CGFEPDRDTFNTLI+A GRCGS IDA K+YD
Sbjct: 455  RITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYD 514

Query: 121  EMIRVGFSPSVTTYNSLLNALARRGDWKAAEAVILDMKSK 2
            EM+  GF+PSV TYN+LLNALARRGDW+ AE+VI DMK+K
Sbjct: 515  EMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNK 554



 Score =  174 bits (442), Expect = 5e-41
 Identities = 109/402 (27%), Positives = 194/402 (48%), Gaps = 36/402 (8%)
 Frame = -3

Query: 1126 MIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKG 947
            +I   GRE     A + F  +  + Y+    ++ ++L  + + G Y  A+S+ + ++   
Sbjct: 286  VISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNN 345

Query: 946  LKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEA 767
              P  VTYN ++  Y + G  + +   L+D +  NG++ +  T +T+I+A GR   +++A
Sbjct: 346  CPPDAVTYNELVAAYVRAG-FYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKA 404

Query: 766  LKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSA 587
            L  +D+MK  G  P   TYNA+L + GK     E + IL +M+ + C P+ +T+N ++S 
Sbjct: 405  LSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSM 464

Query: 586  YVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPN 407
                G  +    V   M S G  P+  T+ T+I A G+ G +  A  ++ +M E G  P+
Sbjct: 465  CGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPS 524

Query: 406  VCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRV-- 233
            V TYNA+L  L ++       S++ +MK+ G  P+  +++ +L      G  K +NR+  
Sbjct: 525  VATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEK 584

Query: 232  ---------------------------------FREMKNCGFEPDRDTFNTLISAYGRCG 152
                                             F+ ++  G++PD   FN+++S + R  
Sbjct: 585  DIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKN 644

Query: 151  SGIDALKMYDEMIRVGFSPSVTTYNSLLNALARRGD-WKAAE 29
                A ++   +   G  P + TYNSL++  AR G+ WKA E
Sbjct: 645  MHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEE 686



 Score =  161 bits (407), Expect = 6e-37
 Identities = 112/468 (23%), Positives = 221/468 (47%), Gaps = 3/468 (0%)
 Frame = -3

Query: 1396 GVAFGDGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVVS---LLKGLEI 1226
            G+ F +      +SA G+  L       + E K FF  ++S+      V+   LL+    
Sbjct: 275  GLGFDEFTCSTVISACGREGL-------LDEAKEFFVGLKSQGYAPGTVTYNALLQVFGK 327

Query: 1225 SGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYS 1046
            +G +S+A+ + + +  N+   +    N+ V   +     R   +     L D +      
Sbjct: 328  AGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYV-----RAGFYEEGAALIDTMTENGIK 382

Query: 1045 LDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILE 866
             +  ++T++++AY R  + ++A+SL++ +K  G  P + TYN +L + GK  +S  ++++
Sbjct: 383  PNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQS-EEMMK 441

Query: 865  LLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYG 686
            +L +++ +G   +  T +T++S CG +GM +   + F EMKS G+ P   T+N L+   G
Sbjct: 442  ILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASG 501

Query: 685  KAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAI 506
            + G   +A  I DEM      P   T+N L++A  + G      +VI  M +KG  P+  
Sbjct: 502  RCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSET 561

Query: 505  TYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNM 326
            +Y+ ++++Y K G       +   + +    P+      ++    K      M      +
Sbjct: 562  SYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQAL 621

Query: 325  KSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSG 146
            + +G  P+ + +N+ML+M   K      + +   ++ CG +PD  T+N+L+  Y R G  
Sbjct: 622  QKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGEC 681

Query: 145  IDALKMYDEMIRVGFSPSVTTYNSLLNALARRGDWKAAEAVILDMKSK 2
              A ++  E+   G    + +YN+++    R+G    A   + +M S+
Sbjct: 682  WKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISR 729



 Score =  115 bits (287), Expect = 5e-23
 Identities = 62/183 (33%), Positives = 102/183 (55%)
 Frame = -3

Query: 1081 KLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVY 902
            + F A+    Y  D+  F S+L  ++R   ++RA  +   I+  GL+P LVTYN ++D+Y
Sbjct: 616  RAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLY 675

Query: 901  GKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPG 722
             + G  W K  E+L E++N+G + D  + +TVI    R+G++ EAL+   EM S+G  P 
Sbjct: 676  ARGGECW-KAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPC 734

Query: 721  TVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVID 542
             VTYN  +  Y   G++ E   +L  M ++ C P+ +T+  +V  Y KA   +E    + 
Sbjct: 735  IVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVS 794

Query: 541  TMT 533
            T+T
Sbjct: 795  TIT 797



 Score =  110 bits (276), Expect = 1e-21
 Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 1/284 (0%)
 Frame = -3

Query: 1126 MIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKG 947
            +I   GR      A K++D +    ++  V ++ ++L+A AR G +  A S+ + +K KG
Sbjct: 496  LITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKG 555

Query: 946  LKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTC-STVISACGREGMLEE 770
             KP+  +Y+++L+ Y K G  + K +  +++   +G  F  +    T+I A  +   L  
Sbjct: 556  FKPSETSYSLILNSYAKGG--YVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAG 613

Query: 769  ALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 590
              + F  ++  GY P  V +N++L ++ +  ++  A  I+  ++     PD VT+N L+ 
Sbjct: 614  MERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMD 673

Query: 589  AYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVP 410
             Y + G   +   ++  + + G   + I+Y TVI  + + G   +AL    +M   G  P
Sbjct: 674  LYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRP 733

Query: 409  NVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPNRITWNTML 278
             + TYN  +G    K    E+  +L  M  + C PN +T+  ++
Sbjct: 734  CIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVV 777


>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
            [Cucumis sativus] gi|449507064|ref|XP_004162923.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  671 bits (1731), Expect = 0.0
 Identities = 329/481 (68%), Positives = 401/481 (83%), Gaps = 2/481 (0%)
 Frame = -3

Query: 1438 QIKPII--KAPQFDYSGVAFGDGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELC 1265
            Q+K ++   APQF+YS     DG  L+FLS KG  LLN I   P   L + FDSV+SEL 
Sbjct: 99   QLKKLVLNSAPQFEYSDKEIRDGP-LQFLSKKGICLLNSIAAEPFDSLNALFDSVKSELL 157

Query: 1264 EVDVVSLLKGLEISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIA 1085
            EVD+VSLLK L++ G   +A+LLF+WV SNS S + + L+ + +E+MIRILGRES++SIA
Sbjct: 158  EVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVK-LDSKAVELMIRILGRESKYSIA 216

Query: 1084 CKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDV 905
             KL D +P++ YSLDVR+ T++LHAY+R GKY++AI++FE +K  GL P+LVTYNVMLDV
Sbjct: 217  LKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDV 276

Query: 904  YGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVP 725
            YGKMGRSW+KIL+LLDE+RN GL+FDEFTCSTVISACGREG++ EA +FF E+KS GY P
Sbjct: 277  YGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEP 336

Query: 724  GTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVI 545
            GTVTYNALL V+GKAGIY+EAL+IL EME N C  D+VT+NELV+AYV+AGF EEGA VI
Sbjct: 337  GTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVI 396

Query: 544  DTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKK 365
            DTMT KG+ PNA+TYTTVI+AYG+AGKE KAL LF QMK+ GCVPNVCTYN+IL +LGKK
Sbjct: 397  DTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKK 456

Query: 364  SRSEEMMSILCNMKSNGCVPNRITWNTMLAMCGNKGAQKYVNRVFREMKNCGFEPDRDTF 185
            SRSEEM+ IL +M+ NGC PNRITWNT+LAMCG+KG  K+VN VFREMKNCGFEP +DTF
Sbjct: 457  SRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTF 516

Query: 184  NTLISAYGRCGSGIDALKMYDEMIRVGFSPSVTTYNSLLNALARRGDWKAAEAVILDMKS 5
            NTLISAYGRCGS +DA KMYDEM++ GF+P  TTYN+LLNALARRGDWKAAE+V+LDM++
Sbjct: 517  NTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRN 576

Query: 4    K 2
            K
Sbjct: 577  K 577



 Score =  181 bits (460), Expect = 4e-43
 Identities = 130/496 (26%), Positives = 219/496 (44%), Gaps = 76/496 (15%)
 Frame = -3

Query: 1288 DSVESELCEVDV---VSLLKGLEISGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIR 1118
            D +  +   +DV    ++L     +G + +A+ +F+ +     S +    N     VM+ 
Sbjct: 221  DKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYN-----VMLD 275

Query: 1117 ILGRESQH-SIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLK 941
            + G+  +       L D +  E    D  + ++V+ A  R G    A   F  +K+ G +
Sbjct: 276  VYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYE 335

Query: 940  PTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACGREGMLEEALK 761
            P  VTYN +L V+GK G  +++ L +L E+ +N    D  T + +++A  R G  EE   
Sbjct: 336  PGTVTYNALLQVFGKAG-IYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGAT 394

Query: 760  FFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVSAYV 581
              D M  +G +P  VTY  +++ YG+AG   +AL + ++M+++ C P+  T+N +++   
Sbjct: 395  VIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLG 454

Query: 580  KAGFIEEGAAVIDTMTSKGITPNAIT---------------------------------- 503
            K    EE   ++  M   G  PN IT                                  
Sbjct: 455  KKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKD 514

Query: 502  -YTTVIDAYGKAGKEDKALSLFGQMKELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNM 326
             + T+I AYG+ G E  A  ++ +M + G  P   TYNA+L  L ++   +   S+L +M
Sbjct: 515  TFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDM 574

Query: 325  KSNGCVPNRITWNTMLAMCGNKG------------------------------------A 254
            ++ G  PN  +++ ML  C  KG                                    A
Sbjct: 575  RNKGFKPNETSFSLMLH-CYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRA 633

Query: 253  QKYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYDEMIRVGFSPSVTTYNS 74
             + + R F E+   G++PD   FN+++S + +      A KM D +   G  P + TYNS
Sbjct: 634  VRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNS 693

Query: 73   LLNALARRGD-WKAAE 29
            L+N  ARRG+ WKA E
Sbjct: 694  LMNMYARRGECWKAEE 709



 Score =  174 bits (441), Expect = 7e-41
 Identities = 126/503 (25%), Positives = 238/503 (47%), Gaps = 38/503 (7%)
 Frame = -3

Query: 1396 GVAFGDGESLEFLSAKGKSLLNLIINNPISELKSFFDSVESELCEVDVVS---LLKGLEI 1226
            G+ F +      +SA G+  L       I+E K FF  ++S   E   V+   LL+    
Sbjct: 298  GLQFDEFTCSTVISACGREGL-------INEAKEFFVELKSSGYEPGTVTYNALLQVFGK 350

Query: 1225 SGNWSKAVLLFQWVHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYS 1046
            +G +S+A+ + + +  N+ + ++   N+ V   +     R   +     + D +  +   
Sbjct: 351  AGIYSEALNILKEMEDNNCTLDSVTYNELVAAYV-----RAGFYEEGATVIDTMTRKGVM 405

Query: 1045 LDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILE 866
             +  ++T+V++AY R GK  +A+ LF  +K  G  P + TYN +L + GK  RS  ++++
Sbjct: 406  PNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRS-EEMIK 464

Query: 865  LLDEIRNNGLEFDEFTCSTVISACGREGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYG 686
            +L ++R NG   +  T +T+++ CG +G  +     F EMK+ G+ PG  T+N L+  YG
Sbjct: 465  ILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYG 524

Query: 685  KAGIYTEALHILDEMERNKCPPDAVTFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAI 506
            + G   +A  + DEM +    P A T+N L++A  + G  +   +V+  M +KG  PN  
Sbjct: 525  RCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNET 584

Query: 505  TYTTVIDAYGKAGKED---------------------KALSL--------------FGQM 431
            +++ ++  Y K G                        + L L              F ++
Sbjct: 585  SFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEEL 644

Query: 430  KELGCVPNVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPNRITWNTMLAMCGNKGAQ 251
             + G  P++  +N++L +  K +  E    +L  ++ +G  P+ +T+N+++ M   +G  
Sbjct: 645  MKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGEC 704

Query: 250  KYVNRVFREMKNCGFEPDRDTFNTLISAYGRCGSGIDALKMYDEMIRVGFSPSVTTYNSL 71
                 + + +   G  PD  ++NT+I  + R G   +A+++  EM   G  P + TYN+ 
Sbjct: 705  WKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTF 764

Query: 70   LNALARRGDWKAAEAVILDMKSK 2
            ++  A RG +   + VI  M  K
Sbjct: 765  VSGYAGRGMFAEVDEVISYMIQK 787



 Score =  115 bits (288), Expect = 4e-23
 Identities = 73/295 (24%), Positives = 143/295 (48%), Gaps = 1/295 (0%)
 Frame = -3

Query: 1126 MIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKG 947
            +I   GR      A K++D +    ++    ++ ++L+A AR G ++ A S+   ++ KG
Sbjct: 519  LISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKG 578

Query: 946  LKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTC-STVISACGREGMLEE 770
             KP   ++++ML  Y K G    + LE + +   +G  F  +    T+I A  +   +  
Sbjct: 579  FKPNETSFSLMLHCYAKGGNV--RGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRG 636

Query: 769  ALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAVTFNELVS 590
              + F+E+   GY P  V +N++L ++ K  +Y  A  +LD +  +   PD VT+N L++
Sbjct: 637  MERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMN 696

Query: 589  AYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQMKELGCVP 410
             Y + G   +   ++  +   G +P+ ++Y T+I  + + G   +A+ +  +M   G  P
Sbjct: 697  MYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICP 756

Query: 409  NVCTYNAILGMLGKKSRSEEMMSILCNMKSNGCVPNRITWNTMLAMCGNKGAQKY 245
             + TYN  +     +    E+  ++  M    C PN +T+   + + G   A+KY
Sbjct: 757  CIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYK--IIVDGYCKARKY 809



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 54/183 (29%), Positives = 89/183 (48%)
 Frame = -3

Query: 970  FEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNGLEFDEFTCSTVISACG 791
            FE +   G KP +V +N ML ++ K    + +  ++LD IR +GL+ D  T +++++   
Sbjct: 641  FEELMKNGYKPDMVIFNSMLSIFAK-NNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYA 699

Query: 790  REGMLEEALKFFDEMKSQGYVPGTVTYNALLHVYGKAGIYTEALHILDEMERNKCPPDAV 611
            R G   +A +    +   G  P  V+YN ++  + + G+  EA+ ++ EM      P   
Sbjct: 700  RRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIF 759

Query: 610  TFNELVSAYVKAGFIEEGAAVIDTMTSKGITPNAITYTTVIDAYGKAGKEDKALSLFGQM 431
            T+N  VS Y   G   E   VI  M  K   PN +TY  ++D Y KA K   A+     +
Sbjct: 760  TYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGI 819

Query: 430  KEL 422
            K +
Sbjct: 820  KNI 822