BLASTX nr result

ID: Coptis25_contig00013384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013384
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis v...    74   8e-11
ref|NP_001236870.1| uncharacterized protein LOC100527752 [Glycin...    68   3e-09
gb|AFK37591.1| unknown [Lotus japonicus]                               66   1e-08
ref|XP_003564531.1| PREDICTED: viral IAP-associated factor homol...    66   1e-08
ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|22...    66   1e-08

>ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis vinifera]
           gi|296090246|emb|CBI40065.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 37/50 (74%), Positives = 41/50 (82%), Gaps = 5/50 (10%)
 Frame = +3

Query: 771 VLLCQSDPVLNDGQSGS-----DVIEGVRKRFIEKVVAQHEDDEDAYFSD 905
           ++LCQSDPVLNDGQSGS     DVIEGVRKRFIEKVV +HEDD+D   SD
Sbjct: 203 LVLCQSDPVLNDGQSGSGPSREDVIEGVRKRFIEKVVTEHEDDDDGSSSD 252


>ref|NP_001236870.1| uncharacterized protein LOC100527752 [Glycine max]
           gi|255633114|gb|ACU16912.1| unknown [Glycine max]
          Length = 245

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 32/46 (69%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +3

Query: 771 VLLCQSDPVLNDGQSGSD-VIEGVRKRFIEKVVAQHEDDEDAYFSD 905
           ++LCQSDPVLNDG +G++ +IEGVRKRFIEKVVA HE+ +D Y SD
Sbjct: 200 LVLCQSDPVLNDGHNGNEAIIEGVRKRFIEKVVADHEEGDDDYSSD 245


>gb|AFK37591.1| unknown [Lotus japonicus]
          Length = 114

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 5/50 (10%)
 Frame = +3

Query: 771 VLLCQSDPVLNDGQSGSD-----VIEGVRKRFIEKVVAQHEDDEDAYFSD 905
           ++LCQSDPVLNDGQSG++     VIEGVRKRFIEKVV  HE+ ED   SD
Sbjct: 65  LVLCQSDPVLNDGQSGNEQSREAVIEGVRKRFIEKVVLDHEEQEDDSTSD 114


>ref|XP_003564531.1| PREDICTED: viral IAP-associated factor homolog [Brachypodium
           distachyon]
          Length = 251

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 40/71 (56%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
 Frame = +3

Query: 708 KGIYFNYCIFWLFLITAVCSCVLLCQSDPVLNDGQSGSD-----VIEGVRKRFIEKVVAQ 872
           KG Y     F     T     + LCQSDPVLNDGQ GSD     VIEGVR++FIEKVVAQ
Sbjct: 181 KGTYVGLQKFGGKKCTPESVALALCQSDPVLNDGQGGSDSSRNNVIEGVRRKFIEKVVAQ 240

Query: 873 HEDDEDAYFSD 905
           HE  ED   SD
Sbjct: 241 HEAREDEDDSD 251


>ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|223549454|gb|EEF50942.1|
           Phosducin, putative [Ricinus communis]
          Length = 251

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 5/45 (11%)
 Frame = +3

Query: 771 VLLCQSDPVLNDGQSGSD-----VIEGVRKRFIEKVVAQHEDDED 890
           ++LCQSDPVLNDGQSGSD     V+EGVR+R IEKVV +HEDD+D
Sbjct: 201 LVLCQSDPVLNDGQSGSDPSREAVMEGVRRRLIEKVVKEHEDDDD 245


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