BLASTX nr result

ID: Coptis25_contig00013383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013383
         (1453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29160.3| unnamed protein product [Vitis vinifera]              412   e-120
ref|XP_002276838.1| PREDICTED: uncharacterized protein LOC100262...   412   e-120
ref|XP_003522869.1| PREDICTED: uncharacterized protein LOC100813...   404   e-118
ref|XP_003527531.1| PREDICTED: uncharacterized protein LOC100813...   400   e-117
ref|XP_002525579.1| ubiquitin-protein ligase, putative [Ricinus ...   395   e-113

>emb|CBI29160.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  412 bits (1060), Expect(2) = e-120
 Identities = 197/277 (71%), Positives = 239/277 (86%), Gaps = 3/277 (1%)
 Frame = +2

Query: 176 LSPKCPLGYDSHTFKLGPLSCVICKALLFQTTKCVPCSHKFCKACISRFKDCPLCGADIE 355
           +SPKCP GYDS TFKLGPLSC+IC+ALLF+++KCVPCSH +CKACISRFKDCPLCGADIE
Sbjct: 81  ISPKCPFGYDSQTFKLGPLSCMICQALLFESSKCVPCSHVYCKACISRFKDCPLCGADIE 140

Query: 356 RVEPDEDLQATVDRFIEGHARIKRPLLDKNSKDVANETDTVLYGDISFDRGAFLVQQAMR 535
           ++E D +LQ TVDRFIEGH RIKRP ++ +S++   +  TV+Y D+S +RGAFLVQ AMR
Sbjct: 141 KIEADMNLQNTVDRFIEGHGRIKRPHVNTDSEEAVGDDKTVIYEDVSLERGAFLVQHAMR 200

Query: 536 AFRSCNILSAKSRLILCAEDIREQIQRLGNSSELSSQLGAVLGMLGDCCRAMEDSSSAIT 715
           AFR+ N+ SAKSRL +CAEDIR Q+++LGN+SEL SQLGAVLGMLGDCCRA  D+ SA+T
Sbjct: 201 AFRANNVESAKSRLSICAEDIRGQLEKLGNTSELCSQLGAVLGMLGDCCRATGDADSAVT 260

Query: 716 YFEQSVEFLSKLPTDDLEVMHSLSVSLNKIGDLKYHAGDLQTARSYYSRSLDVRRNAIK- 892
           YFE+SV+FL KLP DDLE+ H+LSVSLNKIGDLKY+ GDL+ ARSYYS+SLDVRRNAIK 
Sbjct: 261 YFEESVDFLRKLPADDLEITHTLSVSLNKIGDLKYYDGDLEAARSYYSQSLDVRRNAIKD 320

Query: 893 --NFPSQTLDVAISLAKVADVDRGLGNEGLAVEGFQQ 997
             N PSQ LDVA+SLAKVADV+R +GNE +A+ GF++
Sbjct: 321 RSNVPSQILDVAVSLAKVADVNRNVGNEDVAINGFEE 357



 Score = 47.4 bits (111), Expect(2) = e-120
 Identities = 21/39 (53%), Positives = 30/39 (76%)
 Frame = +1

Query: 1054 AVEGFQQAVKCLESLTVDSNETGLEHKRQSVLDFLYGQL 1170
            A+ GF++A+K LESLT+ S E GLE +R SV++FL  Q+
Sbjct: 351  AINGFEEAIKLLESLTLSSEEAGLEQRRLSVMEFLNKQI 389


>ref|XP_002276838.1| PREDICTED: uncharacterized protein LOC100262520 [Vitis vinifera]
          Length = 369

 Score =  412 bits (1060), Expect(2) = e-120
 Identities = 197/277 (71%), Positives = 239/277 (86%), Gaps = 3/277 (1%)
 Frame = +2

Query: 176 LSPKCPLGYDSHTFKLGPLSCVICKALLFQTTKCVPCSHKFCKACISRFKDCPLCGADIE 355
           +SPKCP GYDS TFKLGPLSC+IC+ALLF+++KCVPCSH +CKACISRFKDCPLCGADIE
Sbjct: 56  ISPKCPFGYDSQTFKLGPLSCMICQALLFESSKCVPCSHVYCKACISRFKDCPLCGADIE 115

Query: 356 RVEPDEDLQATVDRFIEGHARIKRPLLDKNSKDVANETDTVLYGDISFDRGAFLVQQAMR 535
           ++E D +LQ TVDRFIEGH RIKRP ++ +S++   +  TV+Y D+S +RGAFLVQ AMR
Sbjct: 116 KIEADMNLQNTVDRFIEGHGRIKRPHVNTDSEEAVGDDKTVIYEDVSLERGAFLVQHAMR 175

Query: 536 AFRSCNILSAKSRLILCAEDIREQIQRLGNSSELSSQLGAVLGMLGDCCRAMEDSSSAIT 715
           AFR+ N+ SAKSRL +CAEDIR Q+++LGN+SEL SQLGAVLGMLGDCCRA  D+ SA+T
Sbjct: 176 AFRANNVESAKSRLSICAEDIRGQLEKLGNTSELCSQLGAVLGMLGDCCRATGDADSAVT 235

Query: 716 YFEQSVEFLSKLPTDDLEVMHSLSVSLNKIGDLKYHAGDLQTARSYYSRSLDVRRNAIK- 892
           YFE+SV+FL KLP DDLE+ H+LSVSLNKIGDLKY+ GDL+ ARSYYS+SLDVRRNAIK 
Sbjct: 236 YFEESVDFLRKLPADDLEITHTLSVSLNKIGDLKYYDGDLEAARSYYSQSLDVRRNAIKD 295

Query: 893 --NFPSQTLDVAISLAKVADVDRGLGNEGLAVEGFQQ 997
             N PSQ LDVA+SLAKVADV+R +GNE +A+ GF++
Sbjct: 296 RSNVPSQILDVAVSLAKVADVNRNVGNEDVAINGFEE 332



 Score = 47.4 bits (111), Expect(2) = e-120
 Identities = 21/39 (53%), Positives = 30/39 (76%)
 Frame = +1

Query: 1054 AVEGFQQAVKCLESLTVDSNETGLEHKRQSVLDFLYGQL 1170
            A+ GF++A+K LESLT+ S E GLE +R SV++FL  Q+
Sbjct: 326  AINGFEEAIKLLESLTLSSEEAGLEQRRLSVMEFLNKQI 364


>ref|XP_003522869.1| PREDICTED: uncharacterized protein LOC100813258 [Glycine max]
          Length = 367

 Score =  404 bits (1037), Expect(2) = e-118
 Identities = 196/276 (71%), Positives = 235/276 (85%), Gaps = 3/276 (1%)
 Frame = +2

Query: 179 SPKCPLGYDSHTFKLGPLSCVICKALLFQTTKCVPCSHKFCKACISRFKDCPLCGADIER 358
           SPKCP GYDS +FK+GPLSC +C+ALLF T+KCVPCSH FCKACISRFKDCPLCGADI +
Sbjct: 50  SPKCPFGYDSQSFKIGPLSCTVCQALLFDTSKCVPCSHVFCKACISRFKDCPLCGADIVK 109

Query: 359 VEPDEDLQATVDRFIEGHARIKRPLLDKNSKDVANETDTVLYGDISFDRGAFLVQQAMRA 538
           +EPD +LQ  VDRFIEGHARIKR +     ++ A E+  V+Y D+S +RG+FLVQQAMRA
Sbjct: 110 IEPDANLQGVVDRFIEGHARIKRSVSADKGEEAA-ESKQVIYEDVSLERGSFLVQQAMRA 168

Query: 539 FRSCNILSAKSRLILCAEDIREQIQRLGNSSELSSQLGAVLGMLGDCCRAMEDSSSAITY 718
           FR+ N+ SAKSRL  CAEDIR+Q++++GN+SEL SQLGAVLGMLGDCCRAM D+SSA+ Y
Sbjct: 169 FRAQNLESAKSRLNFCAEDIRDQLEKVGNTSELCSQLGAVLGMLGDCCRAMGDASSAVAY 228

Query: 719 FEQSVEFLSKLPTDDLEVMHSLSVSLNKIGDLKYHAGDLQTARSYYSRSLDVRRNAIK-- 892
           FE+SV+FLSKLP DDLE+ H+LSVSLNKIGDLKY+ GDLQ ARSYY +SL+VRR+A+K  
Sbjct: 229 FEESVQFLSKLPKDDLEITHTLSVSLNKIGDLKYYDGDLQAARSYYFKSLNVRRDAVKHN 288

Query: 893 -NFPSQTLDVAISLAKVADVDRGLGNEGLAVEGFQQ 997
            N PSQ LDVA+SLAKVADVDR LG+E LA +GFQ+
Sbjct: 289 SNVPSQVLDVAVSLAKVADVDRNLGDEKLATDGFQE 324



 Score = 49.3 bits (116), Expect(2) = e-118
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +1

Query: 1054 AVEGFQQAVKCLESLTVDSNETGLEHKRQSVLDFLYGQL 1170
            A +GFQ+A+  LESLT+ S  +GLE +RQSV+DFL  QL
Sbjct: 318  ATDGFQEAIDLLESLTLKSEASGLEQRRQSVIDFLRSQL 356


>ref|XP_003527531.1| PREDICTED: uncharacterized protein LOC100813844 [Glycine max]
          Length = 367

 Score =  400 bits (1029), Expect(2) = e-117
 Identities = 202/323 (62%), Positives = 244/323 (75%), Gaps = 34/323 (10%)
 Frame = +2

Query: 131 MSSVCPFAKATRNE-------------------------------YLSPKCPLGYDSHTF 217
           M+ VCPF KA+R +                                 SPKCP GYDSH+F
Sbjct: 3   MTPVCPFVKASRPDDNNASKKSGENSMKHQVESESKGKKEVNDSASTSPKCPFGYDSHSF 62

Query: 218 KLGPLSCVICKALLFQTTKCVPCSHKFCKACISRFKDCPLCGADIERVEPDEDLQATVDR 397
           K+GPLSC +C+ALLF T+KCVPCSH FCKACI RFKDCPLCGADI ++EPD +LQ  VD 
Sbjct: 63  KIGPLSCTVCQALLFDTSKCVPCSHVFCKACILRFKDCPLCGADIVKIEPDANLQGVVDH 122

Query: 398 FIEGHARIKRPLLDKNSKDVANETDTVLYGDISFDRGAFLVQQAMRAFRSCNILSAKSRL 577
           FIEGHARIKR +     ++ A E+  V+Y D+S +RG+FLVQQAMRAFR+ N+ SAKSRL
Sbjct: 123 FIEGHARIKRSVSSDKGEE-ATESKKVIYEDVSLERGSFLVQQAMRAFRAQNLESAKSRL 181

Query: 578 ILCAEDIREQIQRLGNSSELSSQLGAVLGMLGDCCRAMEDSSSAITYFEQSVEFLSKLPT 757
            LCAEDIR+Q++++GN+SEL SQLGAVLGMLGDCCRAM D+SSA+ YFE+SV+FLSKLP 
Sbjct: 182 NLCAEDIRDQLEKVGNTSELCSQLGAVLGMLGDCCRAMGDASSAVAYFEESVQFLSKLPK 241

Query: 758 DDLEVMHSLSVSLNKIGDLKYHAGDLQTARSYYSRSLDVRRNAIK---NFPSQTLDVAIS 928
           DDLE+ H+LSVSLNKIGDLKY+  DLQ ARSYY +SL+VRR+ +K   N PSQ LDVA+S
Sbjct: 242 DDLEITHTLSVSLNKIGDLKYYDEDLQAARSYYFKSLNVRRDVVKHNSNVPSQVLDVAVS 301

Query: 929 LAKVADVDRGLGNEGLAVEGFQQ 997
           LAKVADVDR LG+E LA +GFQ+
Sbjct: 302 LAKVADVDRNLGDEKLATDGFQE 324



 Score = 50.1 bits (118), Expect(2) = e-117
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 1054 AVEGFQQAVKCLESLTVDSNETGLEHKRQSVLDFLYGQL 1170
            A +GFQ+A+  LESLT+ S  +GLE +RQSVLDFL  QL
Sbjct: 318  ATDGFQEAIDLLESLTLKSEASGLEQRRQSVLDFLRSQL 356


>ref|XP_002525579.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535158|gb|EEF36838.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 392

 Score =  395 bits (1015), Expect(2) = e-113
 Identities = 194/274 (70%), Positives = 229/274 (83%), Gaps = 3/274 (1%)
 Frame = +2

Query: 185 KCPLGYDSHTFKLGPLSCVICKALLFQTTKCVPCSHKFCKACISRFKDCPLCGADIERVE 364
           KCPLGYDS +FK+GPLSC+IC+ALLF TTKCVPC+H FCKAC+S F+DCPLCGADIE+ E
Sbjct: 78  KCPLGYDSRSFKIGPLSCIICQALLFDTTKCVPCNHIFCKACVSPFRDCPLCGADIEKFE 137

Query: 365 PDEDLQATVDRFIEGHARIKRPLLDKNSKDVANETDTVLYGDISFDRGAFLVQQAMRAFR 544
            + +LQATVDRFIEGHARIKR  ++K+ ++   E   V+Y D+S +RGAFLVQ AMRAFR
Sbjct: 138 AEMNLQATVDRFIEGHARIKRSHINKHEEEEVGENTKVIYEDVSLERGAFLVQHAMRAFR 197

Query: 545 SCNILSAKSRLILCAEDIREQIQRLGNSSELSSQLGAVLGMLGDCCRAMEDSSSAITYFE 724
           + N  SAKSRL LCAEDIR QI+  GN+ EL SQLGAVLGMLGDCCRAM D+ SA+ YFE
Sbjct: 198 AKNFESAKSRLSLCAEDIRGQIEAAGNTPELCSQLGAVLGMLGDCCRAMGDAGSAVAYFE 257

Query: 725 QSVEFLSKLPTDDLEVMHSLSVSLNKIGDLKYHAGDLQTARSYYSRSLDVRRNAIKNFP- 901
           +SVEFLSK PTDD EVMH+LSVSLNKIGDLKY+ GDL+ A+SYYSRSL+VRR+AI++ P 
Sbjct: 258 ESVEFLSKFPTDDQEVMHTLSVSLNKIGDLKYYDGDLEAAKSYYSRSLNVRRDAIEHHPH 317

Query: 902 --SQTLDVAISLAKVADVDRGLGNEGLAVEGFQQ 997
             SQ+LDVA+SLAKVAD DR LGNE  AV  FQ+
Sbjct: 318 VSSQSLDVAVSLAKVADADRSLGNEDAAVSRFQE 351



 Score = 42.4 bits (98), Expect(2) = e-113
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +1

Query: 1054 AVEGFQQAVKCLESLTVDSNETGLEHKRQSVLDFLYGQL 1170
            AV  FQ+A+K LESLT+   E  L+ +R SVL+FL  QL
Sbjct: 345  AVSRFQEAIKLLESLTLKPEEAALDQRRLSVLEFLNNQL 383


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