BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013380
         (1690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   329   2e-87
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   316   1e-83
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   316   1e-83
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ...   315   2e-83
ref|XP_003525408.1| PREDICTED: general transcription factor IIE ...   312   2e-82

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
            vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
            product [Vitis vinifera]
          Length = 285

 Score =  329 bits (843), Expect = 2e-87
 Identities = 175/283 (61%), Positives = 213/283 (75%), Gaps = 2/283 (0%)
 Frame = +1

Query: 451  MVLEERLSKFHKQQQKCISTLTSIRARAGSSN-AAQHRIEASATISDSVPARFSHAIKFS 627
            M L+E L+KF KQQ+KC STLTSI A+AGSS      +   +A      PA     +KFS
Sbjct: 1    MALQESLAKFKKQQEKCQSTLTSIAAKAGSSKPTVPQKFTPAAPTKPPTPA-----VKFS 55

Query: 628  HDTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTN 807
            +DT RLQ INSIRK+PVG+QIKRVI LLL  R+AFTPE+INE C VD  ANK+VF+SL N
Sbjct: 56   NDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRN 115

Query: 808  NIKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGE 987
            N KV+Y+G  F+YKS HD+KD+ QLL L++ FP+GI V++LKD+Y +V EDL+ALKA G+
Sbjct: 116  NPKVSYDGKRFAYKSKHDLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQ 175

Query: 988  VYLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNT 1164
            V+LL N DSQ  I YP+DP+V I VDDDL   F+ IELPRDM+DIEKDLQKNGM+PATNT
Sbjct: 176  VWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQFFRTIELPRDMLDIEKDLQKNGMKPATNT 235

Query: 1165 ARRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQ 1293
            A+RRA+ +VHGIAS            +SKRTKLTNAHLPELFQ
Sbjct: 236  AKRRAMAQVHGIAS--KSKPKKKKHEISKRTKLTNAHLPELFQ 276


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
            communis] gi|223549654|gb|EEF51142.1| Transcription
            initiation factor IIE subunit beta, putative [Ricinus
            communis]
          Length = 282

 Score =  316 bits (810), Expect = 1e-83
 Identities = 171/283 (60%), Positives = 214/283 (75%), Gaps = 2/283 (0%)
 Frame = +1

Query: 451  MVLEERLSKFHKQQQKCISTLTSIRARAGSSNAA-QHRIEASATISDSVPARFSHAIKFS 627
            M L+E+L+KF +QQ+KC +TLTSI A+AGS   +   +I A + I   +P     A+KFS
Sbjct: 1    MDLQEQLNKFKRQQEKCQTTLTSIAAKAGSHKPSITPKIVAPSPI---IPRTPGPAVKFS 57

Query: 628  HDTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTN 807
            +DT RLQ I+SIRK+PVG+QIKRVI LL   R+AFTPE+INE C VDV +NK+VF+SL N
Sbjct: 58   NDTERLQHIHSIRKAPVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRN 117

Query: 808  NIKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGE 987
            N KV Y+G HFSYKS HD+KDK QLL LI+ F +GI V++LKDAY TV EDL+ALKA G 
Sbjct: 118  NPKVHYDGRHFSYKSKHDLKDKKQLLYLIREFKEGIAVIDLKDAYPTVMEDLQALKAAGG 177

Query: 988  VYLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNT 1164
            ++LL N DSQ  I YP+DPK  I VDD+L + F+ IELPRDM+DIEKDLQKNGM+PATNT
Sbjct: 178  IWLLSNFDSQEDIAYPNDPKAVIKVDDELKVKFREIELPRDMLDIEKDLQKNGMKPATNT 237

Query: 1165 ARRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQ 1293
            A+RRA  +V GI++          + +SK+TKLTNAHLPELFQ
Sbjct: 238  AKRRAAAQVQGIST--KPKTKKKTKEISKKTKLTNAHLPELFQ 278


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  316 bits (810), Expect = 1e-83
 Identities = 165/282 (58%), Positives = 210/282 (74%), Gaps = 1/282 (0%)
 Frame = +1

Query: 451  MVLEERLSKFHKQQQKCISTLTSIRARAGSSNAAQHRIEASATISDSVPARFSHAIKFSH 630
            M L+E+L +F KQQ+KC STLTSI     S ++   +  A A    +     + A+KFS+
Sbjct: 1    MALQEQLDRFKKQQEKCQSTLTSIAKSRPSKSSLTQKTVAVAPAPSTSARTPAPAVKFSN 60

Query: 631  DTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTNN 810
            DT RLQ INSIRK+P G+QIKRVI LLL  R+AFTPE+IN+ C VD+ +NK+VF+SL NN
Sbjct: 61   DTERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNN 120

Query: 811  IKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGEV 990
             KV Y+G  FSYKS HD+KDK QLL LI+ FP+GI V++LKD+Y +V +DL+ALKA G++
Sbjct: 121  PKVHYDGKRFSYKSKHDLKDKSQLLVLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQI 180

Query: 991  YLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNTA 1167
            +LL N DSQ  I YP+DP++ I VDDDL  LF+GIELPRDM+DIEKDLQKNGM+PATNTA
Sbjct: 181  WLLSNFDSQEDIAYPNDPRMVIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTA 240

Query: 1168 RRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQ 1293
            +RRA  +V GI++            +SKRTKLTNAHLPELF+
Sbjct: 241  KRRAAAQVQGIST--KQKAKKKKHEISKRTKLTNAHLPELFK 280


>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
            max]
          Length = 280

 Score =  315 bits (808), Expect = 2e-83
 Identities = 165/282 (58%), Positives = 209/282 (74%), Gaps = 1/282 (0%)
 Frame = +1

Query: 451  MVLEERLSKFHKQQQKCISTLTSIRARAGSSNAAQHRIEASATISDSVPARFSHAIKFSH 630
            M L+ERL KF KQQ+KC +TL++I A   ++   +    ASA   ++ PA     +KFS+
Sbjct: 1    MALQERLDKFKKQQEKCQTTLSTIAATKAAAATQKSATHASANGRNAAPA-----VKFSN 55

Query: 631  DTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTNN 810
            DT RLQ INSIRK+PVG+Q+KRVI LLL  R+AFTPE+INE C VD+KANK VFE+L  N
Sbjct: 56   DTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMKANKDVFENLRKN 115

Query: 811  IKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGEV 990
             KV Y+G   SYKS + +KDK +LL L++ +P+G+ V++LKDAY TV EDL+A+KA G++
Sbjct: 116  PKVNYDGQRLSYKSKYGIKDKTELLQLVRKYPEGLAVIDLKDAYPTVMEDLQAMKAAGQI 175

Query: 991  YLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNTA 1167
            +LL N DSQ  I YP+DPKV I VDDDL  LF+ IELPRDMIDIEKDLQKNGM+PATNTA
Sbjct: 176  WLLSNFDSQEDIAYPNDPKVHIKVDDDLKHLFRSIELPRDMIDIEKDLQKNGMKPATNTA 235

Query: 1168 RRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQ 1293
            +RR+  ++ GI+S            +SKRTKLTNAHLPELFQ
Sbjct: 236  QRRSAAQIQGISS--KPKPKKKKSEISKRTKLTNAHLPELFQ 275


>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
            max]
          Length = 279

 Score =  312 bits (799), Expect = 2e-82
 Identities = 169/284 (59%), Positives = 210/284 (73%), Gaps = 3/284 (1%)
 Frame = +1

Query: 451  MVLEERLSKFHKQQQKCISTLTSIRAR--AGSSNAAQHRIEASATISDSVPARFSHAIKF 624
            M L+E+L KF KQQ+KC +TL+SI A   A +  +A H    SA   ++ PA     +KF
Sbjct: 1    MALQEKLDKFKKQQEKCQTTLSSIAASKAAATQKSAAH---GSANGRNAAPA-----VKF 52

Query: 625  SHDTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLT 804
            S+DT RLQ INSIRK+PVG+Q+KRVI LLL  R+AFTPE+IN  C VD+KANK VFE+L 
Sbjct: 53   SNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVDMKANKDVFENLR 112

Query: 805  NNIKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATG 984
             N KV Y+G  FSYKS + +KDK +LL LI+ +P+G+ V++LKDAY TV EDL+ALKA G
Sbjct: 113  KNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAG 172

Query: 985  EVYLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATN 1161
            +++LL N DSQ  I YP+DPKV I VDDDL  LF+ IELPRDMIDIEKDLQKNGM+PATN
Sbjct: 173  QIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATN 232

Query: 1162 TARRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQ 1293
            TA+RR+  ++ GI+S            +SKRTKLTNAHLPELFQ
Sbjct: 233  TAQRRSAAQIQGISS--KPKPKKKKSEISKRTKLTNAHLPELFQ 274