BLASTX nr result

ID: Coptis25_contig00013378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013378
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...   104   4e-20
ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249...   100   1e-18
ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [S...    97   1e-17
emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]    96   3e-17
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    95   4e-17

>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  104 bits (260), Expect = 4e-20
 Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
 Frame = -1

Query: 884 GPKKQVRFNYNGLPVGPGSTQFVTFIGKMARM-HCAP-TYADWPTVPDDIKKHVFKRVTD 711
           G +  V  N  G PVGP +++  TF+G +AR    AP T+ DW  +PD+ K+++++ V  
Sbjct: 7   GEQIAVPINTLGQPVGPEASKLSTFLGTVARNGEMAPLTFVDWFAMPDEKKENMWQFVQT 66

Query: 710 VYDLSPTRRVGVLLKANISWKNWKHRLR-KVYDRYSTNSKRMENIPKRTKKEDWESFIEI 534
            +D+ P  +  VL      W+NWK +L+ + Y  + T+ +R+ +  +R   E W   I  
Sbjct: 67  KFDIEPVCKTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISY 126

Query: 533 CSTDEEKIKREKGKLSREHMKLPHTFGKFGCARI-EEELIKEIPDGIVTRTHVFVATHTS 357
            +++E +++  K K +R + K  HT G    ARI EEE  K+      TR  +++ T T 
Sbjct: 127 WNSEEAQLRSAKNKANRSNQKSTHTAGSKSFARIREEERTKKSGGKEPTRAELYIKTRTR 186

Query: 356 KDGSCPFLELRPSLNEIKRLVSLDPYLGEKDLD-NDPVAKVIGRDGKGRVRGLGTG 192
           KDG          +++++   +          D +D   +V+G +  G VR  G G
Sbjct: 187 KDGQPMNNVAAEIISKLREQETQKQQTSNDSNDWDDAFFQVMGEEKNGHVRTYGLG 242


>ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249234 [Vitis vinifera]
          Length = 675

 Score =  100 bits (248), Expect = 1e-18
 Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 8/234 (3%)
 Frame = -1

Query: 869  VRFNYNGLPVGPGSTQFVTFIGKMARM-HCAP-TYADWPTVPDDIKKHVFKRVTDVYDLS 696
            V  N  G P G  + +   F+G +AR  H AP TYADW  VP   K ++ +     +++S
Sbjct: 382  VETNEVGQPDGDSACKLGNFLGTIARDGHLAPLTYADWRAVPQAAKDNMLQLAKSKFEIS 441

Query: 695  PTRRVGVLLKANISWKNWKHRLRKVYDRYSTNSKRMENIPKRTKKEDWESFIEICSTDEE 516
            P     VL      WK+WK +L+  Y    T+ + +E   +R   E     +    ++E 
Sbjct: 442  PRVENWVLKTLGKRWKDWKAQLKAKYFNNKTDDEHIEIDDERVLPEQRPILLAYWRSEES 501

Query: 515  KIKREKGKLSREHMKLPHTFGKFGCARIEEELIKEIPDG-IVTRTHVFVATHTSKDGSCP 339
            + +    K +R    + HT G    ARI +E   + PDG   TR  +F+ TH  KDG+ P
Sbjct: 502  QKRSAMNKANRAKQSIGHTAGTKSFARIRKEERNKRPDGDEPTRAELFIVTHLRKDGT-P 560

Query: 338  FLELRPSLNEIKRL-----VSLDPYLGEKDLDNDPVAKVIGRDGKGRVRGLGTG 192
              E   S N I +L      +  P   E+ L +D  ++V+G+DG GRVR  G G
Sbjct: 561  VDE--TSANIITQLQERAQANPQPASHERVLHDDIFSQVMGKDGHGRVRTYGLG 612


>ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [Sorghum bicolor]
           gi|241940255|gb|EES13400.1| hypothetical protein
           SORBIDRAFT_07g004115 [Sorghum bicolor]
          Length = 565

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 67/238 (28%), Positives = 115/238 (48%), Gaps = 6/238 (2%)
 Frame = -1

Query: 881 PKKQVRFNYNGLPVGPGSTQFVTFIGKMARMHCAPTYADWPTVPDDIKKHVFKRVTDVYD 702
           PK ++  N  G P+G    QF + IG + R   +   +DW  V  + K  V++ + + YD
Sbjct: 125 PKIKITLNEFGQPIGQNYRQFSSAIGCLVRRTLSVGCSDWRLVDVEKKDQVWETLKEFYD 184

Query: 701 LSPTRRVGVLLKANISWKNWKHRLRK-VYDRYSTNSKRMENIPKRTKKEDWESFIEICST 525
           +    +   L+ A   WK++K  L+K  +D   T          R K  DW+  I+  ++
Sbjct: 185 VDEAAKNWFLITAARKWKDFKATLKKEFFDEKITIEALQRKHGDRVKPTDWKFLIKHWTS 244

Query: 524 DEEKIKREKGKLSREHMKLPHTFG--KFGCARIEEEL-IKEIPDGIVTRTHVFVATHTSK 354
            E + + E  K +R  +++ HT G   F C+R E  + +  +P     R  +++ THT K
Sbjct: 245 PEFEARMEISKANRTKLRIHHTSGSKSFACSRHEMAIELGRVP----RRDEIYIRTHTRK 300

Query: 353 DGSCPFLELRPSLNEIKRLVSLDPYLGEKDLDNDPVAKVI--GRDGKGRVRGLGTGVT 186
           +G  P  +  P +N+++ +V   P L E+ +    V  V    ++ +GRVR LG G T
Sbjct: 301 NG-VPSQQAEPIINKLRSVVEAHPELIERSIQQGDVFTVACGEKEPRGRVRALGLGPT 357


>emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]
          Length = 1253

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
 Frame = -1

Query: 869  VRFNYNGLPVGPGSTQFVTFIGKMARM-HCAP-TYADWPTVPDDIKKHVFKRVTDVYDLS 696
            V  N  G P G  + +   F+G +AR  + AP TY DW  VP   K ++ +     +++S
Sbjct: 358  VETNEVGQPDGDSACKLGNFLGTIARDGNLAPLTYXDWRAVPQAAKDNMLQLAKSKFEIS 417

Query: 695  PTRRVGVLLKANISWKNWKHRLRKVYDRYSTNSKRMENIPKRTKKEDWESFIEICSTDEE 516
            P     VL      WK+WK +L+  Y    T+ + +E   +R   E     +    ++E 
Sbjct: 418  PRVENWVLKTLGKRWKDWKAQLKAKYFNNKTDDEHIEIDDERVLPEQRPILLAYWRSEES 477

Query: 515  KIKREKGKLSREHMKLPHTFGKFGCARIEEELIKEIPDG-IVTRTHVFVATHTSKDGSCP 339
            + +    K +R    + HT G    ARI +E   + PDG   TR  +F+ TH  KDG+ P
Sbjct: 478  QKRSAMNKANRAKQSIGHTAGTKSFARIRKEERNKRPDGDEPTRAELFIVTHLRKDGT-P 536

Query: 338  FLELRPSLNEIKRL-----VSLDPYLGEKDLDNDPVAKVIGRDGKGRVRGLGTG 192
              E   S N I +L      +  P   E+ L +D  ++V+G+DG GRVR  G G
Sbjct: 537  VDE--TSANIITQLQERAQANPQPASHERVLHDDIFSQVMGKDGHGRVRTYGLG 588


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 2/235 (0%)
 Frame = -1

Query: 878  KKQVRFNYNGLPVGPGSTQFVTFIGKMARMHCAPTYADWPTVPDDIKKHVFKRVTDVYDL 699
            +++V +     PVGPGS +  +++G + R H   T   W  V  D+K   +K +   ++L
Sbjct: 924  RERVEYTIMRDPVGPGSVKLASYVGTLVREHVPITIETWKDVSQDMKTVPWKSMQARFEL 983

Query: 698  SPT-RRVGVLLKANISWKNWKHRLRKVYDRYSTNSKRMENIPKRTKKEDWESFIEICSTD 522
                +RV VL +    W+++K R  K  +    N ++M   P      +W  F++I ++ 
Sbjct: 984  DEEFQRVAVLKQMGSLWRSYKSRTVKDINLAPNNQQKMNLRPMNISPIEWRKFVKIKTSA 1043

Query: 521  EEKIKREKGKLSREHMKLPHTFGKFGCARIEEELIKEIPD-GIVTRTHVFVATHTSKDGS 345
              K+  +K K  R   ++PHT  + G  R+ E++  E  D   VTR   +V + T KDG+
Sbjct: 1044 AFKVVSDKYK-ERRRNQIPHTTSRKGMVRLAEDMKLESGDPSEVTRLKFWVKSRTKKDGT 1102

Query: 344  CPFLELRPSLNEIKRLVSLDPYLGEKDLDNDPVAKVIGRDGKGRVRGLGTGVTKT 180
               +    +      LV  D      + + D +++++G D  GR+R +  G++KT
Sbjct: 1103 P--VNTNAAEQIAAELVGSDGPPTSANPEEDHLSQLLGPDNPGRLRAMSRGMSKT 1155


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