BLASTX nr result

ID: Coptis25_contig00013365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013365
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22374.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255...   139   2e-31
emb|CAN67402.1| hypothetical protein VITISV_025968 [Vitis vinifera]   139   2e-31
ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|2...   129   4e-28
ref|XP_004155130.1| PREDICTED: uncharacterized protein LOC101225...   121   7e-26

>emb|CBI22374.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/156 (48%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
 Frame = -1

Query: 520 KLDPSGSSYCTPDVYHFWMEELDWNEMLIKRYIGRESLWVHRRFLSQFGLKHFCFTDGSW 341
           K DP+ SS    ++Y  W EELDWN+MLI+RYIGRE LW+HRRFLS   +KHF  TDG  
Sbjct: 326 KQDPNASSGYNIEIYRVWKEELDWNKMLIERYIGREGLWLHRRFLSLCWIKHFA-TDGGD 384

Query: 340 YPC--------GVDIDNFVSGEFQLFQSCLTISDTGFEDGQAQGVFAAAYILWVSKQLLN 185
             C          DI NF+  E Q   SCL I    FED + Q VF+A YILW++KQ+  
Sbjct: 385 LSCHSELKTDANHDISNFLDNEIQYVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYE 444

Query: 184 SGAIELQEK-LRDLGALKTALNQLCPEKTLLWNDLI 80
              IELQ+K L   G LK  L +  PEK+ LW+ +I
Sbjct: 445 CEGIELQQKQLIRGGELKILLKKHRPEKSFLWDSII 480


>ref|XP_002268977.1| PREDICTED: uncharacterized protein LOC100255283 [Vitis vinifera]
          Length = 425

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/156 (48%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
 Frame = -1

Query: 520 KLDPSGSSYCTPDVYHFWMEELDWNEMLIKRYIGRESLWVHRRFLSQFGLKHFCFTDGSW 341
           K DP+ SS    ++Y  W EELDWN+MLI+RYIGRE LW+HRRFLS   +KHF  TDG  
Sbjct: 271 KQDPNASSGYNIEIYRVWKEELDWNKMLIERYIGREGLWLHRRFLSLCWIKHFA-TDGGD 329

Query: 340 YPC--------GVDIDNFVSGEFQLFQSCLTISDTGFEDGQAQGVFAAAYILWVSKQLLN 185
             C          DI NF+  E Q   SCL I    FED + Q VF+A YILW++KQ+  
Sbjct: 330 LSCHSELKTDANHDISNFLDNEIQYVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYE 389

Query: 184 SGAIELQEK-LRDLGALKTALNQLCPEKTLLWNDLI 80
              IELQ+K L   G LK  L +  PEK+ LW+ +I
Sbjct: 390 CEGIELQQKQLIRGGELKILLKKHRPEKSFLWDSII 425


>emb|CAN67402.1| hypothetical protein VITISV_025968 [Vitis vinifera]
          Length = 742

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/156 (48%), Positives = 94/156 (60%), Gaps = 9/156 (5%)
 Frame = -1

Query: 520  KLDPSGSSYCTPDVYHFWMEELDWNEMLIKRYIGRESLWVHRRFLSQFGLKHFCFTDGSW 341
            K DP+ SS    ++Y  W EELDWN+MLI+RYIGRE LW+HRRFLS   +KHF  TDG  
Sbjct: 588  KQDPNASSGYNIEIYRVWKEELDWNKMLIERYIGREGLWLHRRFLSLCWIKHFA-TDGGD 646

Query: 340  YPC--------GVDIDNFVSGEFQLFQSCLTISDTGFEDGQAQGVFAAAYILWVSKQLLN 185
              C          DI NF+  E Q   SCL I    FED + Q VF+A YILW++KQ+  
Sbjct: 647  LSCHSELKTDANHDISNFLDNEIQYVHSCLAIPSDDFEDVETQAVFSATYILWLTKQMYE 706

Query: 184  SGAIELQEK-LRDLGALKTALNQLCPEKTLLWNDLI 80
               IELQ+K L   G LK  L +  PEK+ LW+ +I
Sbjct: 707  CEGIELQQKQLIRGGELKILLKKHRPEKSFLWDSII 742


>ref|XP_002319657.1| predicted protein [Populus trichocarpa] gi|222858033|gb|EEE95580.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  129 bits (323), Expect = 4e-28
 Identities = 72/157 (45%), Positives = 98/157 (62%), Gaps = 12/157 (7%)
 Frame = -1

Query: 505 GSSYCTPDVYHFWMEELDWNEMLIKRYIGRESLWVHRRFLSQFGLKHFCFTDG---SWYP 335
           G+S    ++Y  W EELDWNE LIK Y+GRE+LW+HRRFLS   ++HF    G   ++  
Sbjct: 264 GTSDGNDEIYRIWQEELDWNEALIKCYVGREALWLHRRFLSLSWIRHFTTNLGDTSNYRV 323

Query: 334 C----GVDIDNFVSGEFQLFQSCLTISDTGFEDGQAQGVFAAAYILWVS-----KQLLNS 182
           C      DI  F+  E  L  SC TI D  FED QAQ +++A YILW++     +Q+ +S
Sbjct: 324 CKSRINADIGIFMDNELHLANSCSTIPDNEFEDFQAQALYSATYILWLTTLFFHQQISDS 383

Query: 181 GAIELQEKLRDLGALKTALNQLCPEKTLLWNDLIGGV 71
             IELQEK  +LG+LKT LN  CPE++ L +D+  G+
Sbjct: 384 QGIELQEK-PNLGSLKTVLNMACPERSFL-SDISTGI 418


>ref|XP_004155130.1| PREDICTED: uncharacterized protein LOC101225667 [Cucumis sativus]
          Length = 425

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/150 (42%), Positives = 91/150 (60%), Gaps = 3/150 (2%)
 Frame = -1

Query: 502 SSYCTPDVYHFWMEELDWNEMLIKRYIGRESLWVHRRFLSQFGLKHFCFTDGSWYPCG-- 329
           +S  T  +Y  W EELDW+EMLIKRYIGRE+LW+HRRFLS   ++HF   +  +   G  
Sbjct: 279 NSGLTLGIYQVWKEELDWDEMLIKRYIGREALWIHRRFLSVCWMRHFATNNKIFNQEGGI 338

Query: 328 -VDIDNFVSGEFQLFQSCLTISDTGFEDGQAQGVFAAAYILWVSKQLLNSGAIELQEKLR 152
            +DI  F+  E  L  SC  +S+  FED QAQ   + AY+LW+ K   N   +++ +KLR
Sbjct: 339 KLDIPFFIENELNLVNSCSFLSNEDFEDFQAQATCSGAYLLWLIKNCPN---LKVDDKLR 395

Query: 151 DLGALKTALNQLCPEKTLLWNDLIGGVHNN 62
               L T L ++CPE+  LW+ LI  + ++
Sbjct: 396 TYN-LNTLLKKVCPERYPLWDSLIDSIESS 424


Top