BLASTX nr result
ID: Coptis25_contig00013350
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013350
(1196 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW71313.1| hypothetical protein ZEAMMB73_547198 [Zea mays] 139 7e-39
gb|AFW66035.1| elongation factor 1-gamma 2 [Zea mays] gi|4139261... 138 1e-37
ref|NP_001151229.1| elongation factor 1-gamma 2 [Zea mays] gi|19... 138 1e-37
gb|EEE56572.1| hypothetical protein OsJ_05923 [Oryza sativa Japo... 136 2e-37
gb|EEC72757.1| hypothetical protein OsI_06402 [Oryza sativa Indi... 136 2e-37
>gb|AFW71313.1| hypothetical protein ZEAMMB73_547198 [Zea mays]
Length = 414
Score = 139 bits (349), Expect(2) = 7e-39
Identities = 87/248 (35%), Positives = 127/248 (51%), Gaps = 33/248 (13%)
Frame = +2
Query: 29 LEKTDSLYNSSQRE--EI*KWIDFSTFEICANIRRRWLSSCGFYIWPDV--EHFLGSLES 196
L+ + LY SS + I +W+DF+ E+ A+I + GFY + V E + +L+
Sbjct: 77 LKANNPLYGSSLIDYAHIEQWMDFAATEVDASIGKWLYPRMGFYPYAAVTEESAIAALKR 136
Query: 197 SLWVLNEHLDSKSFLGGQSETLADVIITCDLLFGINKGMTNSFMCEFCHINSYFREMINL 376
+ LN HL S +FL G S TLAD+++TC+L G ++ +T SF EF HI YF M+N
Sbjct: 137 AFGSLNTHLASNTFLVGHSVTLADIVLTCNLYMGFSRILTKSFTSEFPHIERYFWTMVNQ 196
Query: 377 PNFRKVLGD-------SVLEKRFRFSRPWKPKDSAKQ---------------------KA 472
PNF+KV+GD +L K+ ++ KPK++ K+ K
Sbjct: 197 PNFKKVIGDVKQAEAVPLLPKKIAPAKEQKPKEAKKEAPKPKEAEKPAEEEEAPKPKPKN 256
Query: 473 RIDTFKSGDS-LHNWKVLYRNTRKIEFECVSKGFWDMYNPNEYSLWLCSCRKNVESNALI 649
+D L +WK LY NT+ E KGFWDMY+P YSLW C + N E+
Sbjct: 257 PLDLLPPSKLILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSF 316
Query: 650 QTLKDLGG 673
T+ +GG
Sbjct: 317 VTMNKVGG 324
Score = 49.3 bits (116), Expect(2) = 7e-39
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 669 GGLMRRTRLDGKDLFGQMFITSGED-FIVKGFWLFRGPVRPQLLVDDEHYKE-FKWIPY- 839
GG ++R L K FG+M + E F VKG WLFRGP P+ ++D+ + E ++W
Sbjct: 323 GGFLQRMDLCRKYAFGKMLVVGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVD 382
Query: 840 TNHDGQKNVVNQIIE 884
+ + QK VN +IE
Sbjct: 383 LSDEAQKERVNAMIE 397
>gb|AFW66035.1| elongation factor 1-gamma 2 [Zea mays] gi|413926104|gb|AFW66036.1|
elongation factor 1-gamma 2 [Zea mays]
Length = 414
Score = 138 bits (347), Expect(2) = 1e-37
Identities = 89/249 (35%), Positives = 131/249 (52%), Gaps = 34/249 (13%)
Frame = +2
Query: 29 LEKTDSLYNSSQRE--EI*KWIDFSTFEICANIRRRWLSSCGFYIWPDV--EHFLGSLES 196
L+ + LY SS + I +WIDF+ EI ANI + GFY V E + +L+
Sbjct: 77 LKADNPLYGSSLIDYAHIEQWIDFAATEIDANIGKWLYPRMGFYPHAGVVEESTIAALKR 136
Query: 197 SLWVLNEHLDSKSFLGGQSETLADVIITCDLLFGINKGMTNSFMCEFCHINSYFREMINL 376
+L L+ HL S +FL G S TLAD+++TC+L G ++ +T SF EF H+ YF M+N
Sbjct: 137 ALGSLSTHLASNTFLVGHSVTLADIVMTCNLCMGFSRILTKSFTSEFPHVERYFWTMVNQ 196
Query: 377 PNFRKVLGD-------SVLEKRFRFSRPWKPKDSAKQ--KARIDTFKSGDS--------- 502
PNF+KV+GD ++ ++ ++ KPK++ K+ K ++ T KS +
Sbjct: 197 PNFKKVIGDVKQAEAVPLVPQKAAPAKVQKPKETKKEAPKPKV-TEKSAEEEEAPKPKPK 255
Query: 503 ------------LHNWKVLYRNTRKIEFECVSKGFWDMYNPNEYSLWLCSCRKNVESNAL 646
L +WK LY NT+ E KGFWDMY+P YSLW C + N E+
Sbjct: 256 NPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVS 315
Query: 647 IQTLKDLGG 673
T+ +GG
Sbjct: 316 FVTMNKVGG 324
Score = 46.2 bits (108), Expect(2) = 1e-37
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +3
Query: 669 GGLMRRTRLDGKDLFGQMFITSGED-FIVKGFWLFRGPVRPQLLVDDEHYKE-FKWIPY- 839
GG ++R L K FG+M + E F VKG WLFRG P+ ++D+ + E ++W
Sbjct: 323 GGFLQRMDLCRKYAFGKMLVVGSEPPFKVKGLWLFRGSEIPKFVMDEVYDMELYEWTKVD 382
Query: 840 TNHDGQKNVVNQIIE 884
+ + QK VN +IE
Sbjct: 383 LSDEAQKERVNAMIE 397
>ref|NP_001151229.1| elongation factor 1-gamma 2 [Zea mays] gi|195645182|gb|ACG42059.1|
elongation factor 1-gamma 2 [Zea mays]
Length = 414
Score = 138 bits (347), Expect(2) = 1e-37
Identities = 89/249 (35%), Positives = 131/249 (52%), Gaps = 34/249 (13%)
Frame = +2
Query: 29 LEKTDSLYNSSQRE--EI*KWIDFSTFEICANIRRRWLSSCGFYIWPDV--EHFLGSLES 196
L+ + LY SS + I +WIDF+ EI ANI + GFY V E + +L+
Sbjct: 77 LKADNPLYGSSLIDYAHIEQWIDFAATEIDANIGKWLYPRMGFYPHAGVVEESTIAALKR 136
Query: 197 SLWVLNEHLDSKSFLGGQSETLADVIITCDLLFGINKGMTNSFMCEFCHINSYFREMINL 376
+L L+ HL S +FL G S TLAD+++TC+L G ++ +T SF EF H+ YF M+N
Sbjct: 137 ALGSLSTHLASNTFLVGHSVTLADIVMTCNLCMGFSRILTKSFTSEFPHVERYFWTMVNQ 196
Query: 377 PNFRKVLGD-------SVLEKRFRFSRPWKPKDSAKQ--KARIDTFKSGDS--------- 502
PNF+KV+GD ++ ++ ++ KPK++ K+ K ++ T KS +
Sbjct: 197 PNFKKVIGDVKQAEAVPLVPQKAAPAKVQKPKETKKEAPKPKV-TEKSAEEEEAPKPKPK 255
Query: 503 ------------LHNWKVLYRNTRKIEFECVSKGFWDMYNPNEYSLWLCSCRKNVESNAL 646
L +WK LY NT+ E KGFWDMY+P YSLW C + N E+
Sbjct: 256 NPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVS 315
Query: 647 IQTLKDLGG 673
T+ +GG
Sbjct: 316 FVTMNKVGG 324
Score = 45.8 bits (107), Expect(2) = 1e-37
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +3
Query: 669 GGLMRRTRLDGKDLFGQMFITSGED-FIVKGFWLFRGPVRPQLLVDDEHYKE-FKWIPY- 839
GG ++R L K FG+M + E F VKG WLFRG P+ ++D+ + E ++W
Sbjct: 323 GGFLQRMDLCRKYAFGKMLVVGSEPPFKVKGLWLFRGSEIPKFVMDEVYDMELYEWAKVD 382
Query: 840 TNHDGQKNVVNQIIE 884
+ + QK VN +IE
Sbjct: 383 LSAEAQKERVNAMIE 397
>gb|EEE56572.1| hypothetical protein OsJ_05923 [Oryza sativa Japonica Group]
Length = 479
Score = 136 bits (343), Expect(2) = 2e-37
Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 38/251 (15%)
Frame = +2
Query: 35 KTDS-LYNSSQRE--EI*KWIDFSTFEICANIRRRWLSSCGF--YIWPDVEHFLGSLESS 199
K+D+ LY SS E I +WIDFS E+ AN + GF Y+ E + +L+ S
Sbjct: 139 KSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRS 198
Query: 200 LWVLNEHLDSKSFLGGQSETLADVIITCDLLFGINKGMTNSFMCEFCHINSYFREMINLP 379
L LN HL S ++L G S TLAD+++TC+L G + MT +F EF H+ YF M+N P
Sbjct: 199 LGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQP 258
Query: 380 NFRKVLGD-------SVLEKRFRFSRPWKPKDSAKQ------------------------ 466
NF+KV+GD ++K+ + KPK++ K+
Sbjct: 259 NFKKVMGDVKQADSVPQVQKKAAAPKEQKPKEAKKEAPKEAPKPKAAEKPEEEEEAPKPK 318
Query: 467 -KARIDTFKSGDS-LHNWKVLYRNTRKIEFECVSKGFWDMYNPNEYSLWLCSCRKNVESN 640
K +D L WK LY NT+ E KGFWDMY+P YSLW C + N E+
Sbjct: 319 PKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENT 378
Query: 641 ALIQTLKDLGG 673
T+ +GG
Sbjct: 379 VSFVTMNKVGG 389
Score = 47.0 bits (110), Expect(2) = 2e-37
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 669 GGLMRRTRLDGKDLFGQMFITSGED-FIVKGFWLFRGPVRPQLLVDDEHYKE-FKWIPY- 839
GG ++R L K FG+M + E F VKG WLFRGP P+ ++D+ + E ++W
Sbjct: 388 GGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVD 447
Query: 840 TNHDGQKNVVNQIIE 884
+ + QK V+ +IE
Sbjct: 448 ISDEAQKERVSAMIE 462
>gb|EEC72757.1| hypothetical protein OsI_06402 [Oryza sativa Indica Group]
Length = 479
Score = 136 bits (343), Expect(2) = 2e-37
Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 38/251 (15%)
Frame = +2
Query: 35 KTDS-LYNSSQRE--EI*KWIDFSTFEICANIRRRWLSSCGF--YIWPDVEHFLGSLESS 199
K+D+ LY SS E I +WIDFS E+ AN + GF Y+ E + +L+ S
Sbjct: 139 KSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRS 198
Query: 200 LWVLNEHLDSKSFLGGQSETLADVIITCDLLFGINKGMTNSFMCEFCHINSYFREMINLP 379
L LN HL S ++L G S TLAD+++TC+L G + MT +F EF H+ YF M+N P
Sbjct: 199 LGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQP 258
Query: 380 NFRKVLGD-------SVLEKRFRFSRPWKPKDSAKQ------------------------ 466
NF+KV+GD ++K+ + KPK++ K+
Sbjct: 259 NFKKVMGDVKQADSVPQVQKKAAAPKEQKPKEAKKEAPKEAPKPKAAEKPEEEEEAPKPK 318
Query: 467 -KARIDTFKSGDS-LHNWKVLYRNTRKIEFECVSKGFWDMYNPNEYSLWLCSCRKNVESN 640
K +D L WK LY NT+ E KGFWDMY+P YSLW C + N E+
Sbjct: 319 PKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENT 378
Query: 641 ALIQTLKDLGG 673
T+ +GG
Sbjct: 379 VSFVTMNKVGG 389
Score = 47.0 bits (110), Expect(2) = 2e-37
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +3
Query: 669 GGLMRRTRLDGKDLFGQMFITSGED-FIVKGFWLFRGPVRPQLLVDDEHYKE-FKWIPY- 839
GG ++R L K FG+M + E F VKG WLFRGP P+ ++D+ + E ++W
Sbjct: 388 GGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVD 447
Query: 840 TNHDGQKNVVNQIIE 884
+ + QK V+ +IE
Sbjct: 448 ISDEAQKERVSAMIE 462