BLASTX nr result

ID: Coptis25_contig00013346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013346
         (1373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241...   417   e-114
ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262...   398   e-108
gb|AFK39626.1| unknown [Lotus japonicus]                              387   e-105
ref|XP_003618615.1| CCP [Medicago truncatula] gi|217074134|gb|AC...   386   e-105
ref|XP_002323884.1| predicted protein [Populus trichocarpa] gi|1...   385   e-104

>ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241642 [Vitis vinifera]
          Length = 268

 Score =  417 bits (1071), Expect = e-114
 Identities = 204/269 (75%), Positives = 222/269 (82%)
 Frame = +2

Query: 287  MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 466
            MWN ASNA+SGT GLK+D  K ++A SECSDDE+S+NTSREEGLECPICWESFNIVENVP
Sbjct: 1    MWNFASNALSGTNGLKNDLLKPNQAPSECSDDEISTNTSREEGLECPICWESFNIVENVP 60

Query: 467  YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 646
            YVLWCGHTLCKNCVLGLQWAVVKFP LP+QLP FISCPWC+LLSFRLVYKGNL FPRKNF
Sbjct: 61   YVLWCGHTLCKNCVLGLQWAVVKFPTLPIQLPFFISCPWCNLLSFRLVYKGNLTFPRKNF 120

Query: 647  FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSGLRRAPRSHHPEQSGPN 826
            FLLWMVESMNGDR KSHS+ F DHQP WSSN N    +Q ++   RR P SH PEQS  N
Sbjct: 121  FLLWMVESMNGDRGKSHSS-FCDHQPGWSSNRNLIIGNQGSHVNHRRPPYSHLPEQSESN 179

Query: 827  RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXXYAIPASAVILALYIL 1006
             D  +    +LN+E ++ S+RKSLVFFVHLTAKFP          YAIPASA ILALYIL
Sbjct: 180  HDGGHLINRFLNIERLHLSVRKSLVFFVHLTAKFPLVIIFLLIVLYAIPASAAILALYIL 239

Query: 1007 ITVLFALPSFLILYFAYPSLDWLVREIIT 1093
            ITVLFALPSFLILYFAYPSLDWLVREIIT
Sbjct: 240  ITVLFALPSFLILYFAYPSLDWLVREIIT 268


>ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262874 [Vitis vinifera]
          Length = 269

 Score =  398 bits (1023), Expect = e-108
 Identities = 196/270 (72%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
 Frame = +2

Query: 287  MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 466
            MWN ASN I+G++GLK++S K ++  SECSDDEVSSN SREEGLECPIC+ESFNIVENVP
Sbjct: 1    MWNFASNCIAGSVGLKNNSPKPTQVASECSDDEVSSNISREEGLECPICFESFNIVENVP 60

Query: 467  YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 646
            YVLWCGHTLCKNC+LGL WAVVKFP LP+QLPLFISCPWC+LLSFRLVYKG+LKFPRKN+
Sbjct: 61   YVLWCGHTLCKNCILGLHWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYKGSLKFPRKNY 120

Query: 647  FLLWMVESMNGDRVKSHSTCFGD-HQPAWSSNSNTTPTSQVNYSGLRRAPRSHHPEQSGP 823
            FLLWM+ESMNGDR KSHS+  GD HQP WSS+SN    SQVN+  LRR    HH   SG 
Sbjct: 121  FLLWMLESMNGDREKSHSSFSGDHHQPVWSSDSNLALGSQVNHRILRREQFIHHSGPSGS 180

Query: 824  NRDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXXYAIPASAVILALYI 1003
            N ++ +   NYL LE +++SL KSLVFFV LTAKFP          YAIPASA ILALYI
Sbjct: 181  NHEDGHV-NNYLTLERLHSSLHKSLVFFVQLTAKFPLVVILLLIVLYAIPASAAILALYI 239

Query: 1004 LITVLFALPSFLILYFAYPSLDWLVREIIT 1093
            LITVLFALPS L+LYFAYPSLDWL REIIT
Sbjct: 240  LITVLFALPSVLMLYFAYPSLDWLAREIIT 269


>gb|AFK39626.1| unknown [Lotus japonicus]
          Length = 266

 Score =  387 bits (994), Expect = e-105
 Identities = 187/268 (69%), Positives = 214/268 (79%)
 Frame = +2

Query: 287  MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 466
            MWN AS+ ISG++GLK+D  K + + SECSDDE S  T+REEGLECPICWESFNIVENVP
Sbjct: 1    MWNFASSCISGSVGLKNDCLKPTHSASECSDDETSM-TTREEGLECPICWESFNIVENVP 59

Query: 467  YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 646
            Y LWCGHTLCKNC+LGLQWA+VKFP LP+QLPLFISCPWC++LSFRLV++GNLKFPRKN+
Sbjct: 60   YFLWCGHTLCKNCILGLQWAMVKFPTLPIQLPLFISCPWCNILSFRLVHQGNLKFPRKNY 119

Query: 647  FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSGLRRAPRSHHPEQSGPN 826
            FLLWM+ESMNGDR   HST  GD QP W    N+T  SQ++    RR  + HHPE S  N
Sbjct: 120  FLLWMIESMNGDRATPHSTRCGDDQPVWPGKENSTMGSQLSLGNPRRR-QVHHPELSNSN 178

Query: 827  RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXXYAIPASAVILALYIL 1006
            + N N  GN+L +E ++ SLRKSLV FVHLTAKFP          YAIPASA ILALYI+
Sbjct: 179  QFNGN-TGNHLRMERLHTSLRKSLVLFVHLTAKFPLIIIFLLIVLYAIPASAAILALYIV 237

Query: 1007 ITVLFALPSFLILYFAYPSLDWLVREII 1090
            IT+LFALPSFLILYFAYPSLDWLVREII
Sbjct: 238  ITILFALPSFLILYFAYPSLDWLVREII 265


>ref|XP_003618615.1| CCP [Medicago truncatula] gi|217074134|gb|ACJ85427.1| unknown
            [Medicago truncatula] gi|355493630|gb|AES74833.1| CCP
            [Medicago truncatula] gi|388508162|gb|AFK42147.1| unknown
            [Medicago truncatula]
          Length = 266

 Score =  386 bits (991), Expect = e-105
 Identities = 186/268 (69%), Positives = 213/268 (79%)
 Frame = +2

Query: 287  MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 466
            MWN ASN I+G +GLK DSS  + + SECSDDE S    REEGLECP+CWESFNIVENVP
Sbjct: 1    MWNFASNCIAGNVGLKKDSSNPTHSASECSDDETSV-VGREEGLECPVCWESFNIVENVP 59

Query: 467  YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 646
            YVLWCGHTLCKNC+LGLQWA VKFP LPVQLPLFISCPWC+LLSFRLVY+GNL+FPRKN+
Sbjct: 60   YVLWCGHTLCKNCILGLQWATVKFPTLPVQLPLFISCPWCNLLSFRLVYRGNLRFPRKNY 119

Query: 647  FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSGLRRAPRSHHPEQSGPN 826
            FLLWMVE MNGDRVKSHSTC GD+Q   +S  N T   QVN+  L +  + H P+ S  +
Sbjct: 120  FLLWMVEGMNGDRVKSHSTCCGDNQQQCASKGNLTLGGQVNHGNL-QGGQVHPPDTSNSS 178

Query: 827  RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXXYAIPASAVILALYIL 1006
            +   N R N+L++E V+ SLRKSL+FFV LTAKFP          YA+PASA ILALYIL
Sbjct: 179  QPRANTR-NHLDMERVHISLRKSLIFFVQLTAKFPLIIIFLLIILYAVPASAAILALYIL 237

Query: 1007 ITVLFALPSFLILYFAYPSLDWLVREII 1090
            +T+LFALPSFLILYF+YPSLDWLVREII
Sbjct: 238  VTILFALPSFLILYFSYPSLDWLVREII 265


>ref|XP_002323884.1| predicted protein [Populus trichocarpa] gi|118481933|gb|ABK92900.1|
            unknown [Populus trichocarpa] gi|222866886|gb|EEF04017.1|
            predicted protein [Populus trichocarpa]
          Length = 267

 Score =  385 bits (989), Expect = e-104
 Identities = 189/269 (70%), Positives = 213/269 (79%)
 Frame = +2

Query: 287  MWNLASNAISGTIGLKSDSSKASRAGSECSDDEVSSNTSREEGLECPICWESFNIVENVP 466
            MWN AS  ++G++ L ++S K ++  SE SDDE SS  SREEGLECPICWESFNIVENVP
Sbjct: 1    MWNFASKCLAGSVSL-NNSLKPAQVPSEYSDDEASSVVSREEGLECPICWESFNIVENVP 59

Query: 467  YVLWCGHTLCKNCVLGLQWAVVKFPALPVQLPLFISCPWCHLLSFRLVYKGNLKFPRKNF 646
            YVLWCGHTLCKNC+LGLQWAVVKFP LP+QLPLFISCPWC+LLSFRLVY+GNLKFPRKN+
Sbjct: 60   YVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNLLSFRLVYRGNLKFPRKNY 119

Query: 647  FLLWMVESMNGDRVKSHSTCFGDHQPAWSSNSNTTPTSQVNYSGLRRAPRSHHPEQSGPN 826
            FLLWMVES NGDR KSH T   D QP WSS+SN    +Q +   +RR    HH E S  N
Sbjct: 120  FLLWMVESKNGDREKSHGTFCEDQQPHWSSDSNLALGNQASRGNIRRGQYVHHAEPSEAN 179

Query: 827  RDNVNFRGNYLNLESVNASLRKSLVFFVHLTAKFPXXXXXXXXXXYAIPASAVILALYIL 1006
             D+ N   +YLN+  +++SL+KSLVFFVHLTAKFP          YAIPASA ILALYIL
Sbjct: 180  HDH-NHVNSYLNVRRIHSSLQKSLVFFVHLTAKFPLVIIFLLIILYAIPASAAILALYIL 238

Query: 1007 ITVLFALPSFLILYFAYPSLDWLVREIIT 1093
            ITVLFALPSFLILYFAYPSLDWLVREIIT
Sbjct: 239  ITVLFALPSFLILYFAYPSLDWLVREIIT 267


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