BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013321
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   398   e-108
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   394   e-107
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   391   e-106
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     389   e-105
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   384   e-104

>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  398 bits (1022), Expect = e-108
 Identities = 190/360 (52%), Positives = 248/360 (68%), Gaps = 2/360 (0%)
 Frame = +3

Query: 3    PPGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTATTI 182
            P GLL PLPI   VW D+S+DFI+GLP+    + I+VVVDRLSKYAHF  +SHPYTA+ I
Sbjct: 1104 PAGLLQPLPIPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKI 1163

Query: 183  ADVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTEVTN 362
            A VF+ +I +LHG+P +IV+DR P F STFW+  F++QGT L  SSAYHPQTDGQTE+ N
Sbjct: 1164 AQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVN 1223

Query: 363  RTLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYLPGT 542
            + +E YLRCF+G +P  W KWLP +EWWYNT  H++ K++PF++VY  PPP +  Y PGT
Sbjct: 1224 KMVEQYLRCFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGT 1283

Query: 543  TVVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPYRQS 722
            T +  V+  L+ RD  +++L+ +LQ AQ RMK +AD   T R F + DLV+LRLQPY+Q 
Sbjct: 1284 TQLQEVENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQ 1343

Query: 723  TAASQSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEYVTPTA 902
            +   +   KLSPRFYGP+R++ KIG+VAY+L L    +IHPVFHVS LK KLGE      
Sbjct: 1344 SVVQRRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVV 1403

Query: 903  NLPPL--ADVFAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVRFPE 1076
             LPP     V   EPE IL R + K  N AVT  L++WK    +EA+W ++      FP+
Sbjct: 1404 TLPPXDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKGLGEDEASWVEYSTLVNEFPD 1463


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  394 bits (1012), Expect = e-107
 Identities = 193/362 (53%), Positives = 245/362 (67%), Gaps = 2/362 (0%)
 Frame = +3

Query: 3    PPGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTATTI 182
            P GLL PLPI   VW D++MDFIDGLP  + KT+I+VVVDRLSK AHF A++HPYTA T+
Sbjct: 968  PAGLLQPLPIPCQVWDDITMDFIDGLPRSDGKTSIMVVVDRLSKSAHFIAIAHPYTAKTL 1027

Query: 183  ADVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTEVTN 362
            A+ FV  +V+LHGMPR+I+SDR PVFIS FW+ F ++ GTKL  +SAYHPQ+DGQTEV N
Sbjct: 1028 ANKFVEGVVKLHGMPRSIISDRDPVFISNFWQEFLKLSGTKLRMTSAYHPQSDGQTEVVN 1087

Query: 363  RTLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYLPGT 542
            R +E YLRCF   +P  W   LPW+E+WYNTTYHS+  MTPFQA+Y RPPP+I +Y  G+
Sbjct: 1088 RCIEQYLRCFVHHKPRHWNSLLPWAEYWYNTTYHSSTGMTPFQALYGRPPPAIPSYEIGS 1147

Query: 543  TVVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPYRQS 722
              +  +D  +  R+  LQ LK HL +A  RMK  AD  R E +FEV D V+LRLQPYRQ 
Sbjct: 1148 CPIEELDDQMTARNELLQELKAHLHAANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQ 1207

Query: 723  TAASQSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEYVTPTA 902
            +   ++  KLS R+YGP+ I  +IG VAYKL L  G RIHPVFHVS LK K+GE      
Sbjct: 1208 SVFRRTSHKLSNRYYGPYEIEERIGPVAYKLKLSPGSRIHPVFHVSLLKKKIGEVAIAND 1267

Query: 903  NLPPLAD--VFAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVRFPE 1076
             LPPL +  V   +P ++L        + + +  L+ W+  P EEATWED  +    FP 
Sbjct: 1268 ELPPLTEEGVIRLQPRKVLSTRWVNKGSTSASESLVLWEGLPEEEATWEDSQQLLRSFPN 1327

Query: 1077 FS 1082
             +
Sbjct: 1328 LN 1329


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  391 bits (1004), Expect = e-106
 Identities = 189/361 (52%), Positives = 252/361 (69%), Gaps = 1/361 (0%)
 Frame = +3

Query: 6    PGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTATTIA 185
            PGLL PLPI D +W ++SMDFI+GLP    KT I+VVVDRLSK AHF ALSHPY+A T+A
Sbjct: 1140 PGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVA 1199

Query: 186  DVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTEVTNR 365
              ++ ++ +LHG P +IVSDR  VF S FW  FF +QG  L  +SAYHPQ+DGQTEV NR
Sbjct: 1200 HAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNR 1259

Query: 366  TLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYLPGTT 545
             LE YLRC    +P  W+KWL  +E+WYNT YHS+ +MTPF+ VY + PP    YLPG +
Sbjct: 1260 CLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGES 1319

Query: 546  VVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPYRQST 725
             V  V  +L++R+  L  LK HL  AQ RMK +AD HRTER FE+ D V+++LQPYRQ +
Sbjct: 1320 KVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQS 1379

Query: 726  AASQSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEYVTPTAN 905
               ++  KLSP+++GP++I+ + G VAYKLAL +  ++HPVFHVS LK+ +G  V+ T +
Sbjct: 1380 VVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVGN-VSTTVH 1438

Query: 906  LPP-LADVFAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVRFPEFS 1082
            LP  + DVF   PE++++R +     KAVT+ L++W + P+EEATWE   +    FPEF 
Sbjct: 1439 LPSVMQDVFEKVPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWEFLFDLQKTFPEFE 1498

Query: 1083 A 1085
            A
Sbjct: 1499 A 1499


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  389 bits (998), Expect = e-105
 Identities = 193/368 (52%), Positives = 245/368 (66%), Gaps = 10/368 (2%)
 Frame = +3

Query: 6    PGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTATTIA 185
            PGLL PLP+ + VW  +SMDFI+GLP    K  ILVV+DRLSK AHF ALSHPYTA  +A
Sbjct: 1196 PGLLQPLPVPNGVWECISMDFIEGLPPSAGKHCILVVIDRLSKNAHFMALSHPYTAIEVA 1255

Query: 186  DVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTEVTNR 365
              ++ ++ +LHGMP+ I SDR P F+S  W   F++ G  L  S+AYHPQTDGQTEVTN+
Sbjct: 1256 QAYLDNVFKLHGMPKDITSDRDPTFLSEVWRELFRVHGVDLRFSTAYHPQTDGQTEVTNK 1315

Query: 366  TLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYLPGTT 545
            TLE YLRC     P  W+KWLP +EWWYNTT+HSAIK TPF+ VY +PPP    YLPG +
Sbjct: 1316 TLETYLRCMTADAPQTWSKWLPLAEWWYNTTFHSAIKCTPFEIVYGQPPPVHLPYLPGES 1375

Query: 546  VVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPYRQST 725
                VD +L+ R+  + +LK HL  AQ RMK YADSHR++R F+V D V+L+LQPYRQ +
Sbjct: 1376 SSVVVDRSLQKREELIAMLKFHLLRAQNRMKQYADSHRSQREFQVGDFVYLKLQPYRQQS 1435

Query: 726  AASQSY-SKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKL---------K 875
              ++    KLSPRFYGPFR+  K+G+VAYKL L  G  IH VFHVS LKL          
Sbjct: 1436 LKTKGVPHKLSPRFYGPFRVTDKVGTVAYKLELPQGTAIHNVFHVSQLKLCPNPPSEAPV 1495

Query: 876  LGEYVTPTANLPPLADVFAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHE 1055
            + +Y+T   N        A EPE IL++ +    N+AVT+ L+QWK  P  +ATWE + +
Sbjct: 1496 MPQYLTDVGN--------AKEPEAILEKKMVNRQNQAVTKVLVQWKGEPPSKATWEFYKD 1547

Query: 1056 FCVRFPEF 1079
            F  + P F
Sbjct: 1548 FITKHPTF 1555


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  384 bits (986), Expect = e-104
 Identities = 193/363 (53%), Positives = 243/363 (66%), Gaps = 4/363 (1%)
 Frame = +3

Query: 3    PPGLLNPLPIHDDVWLDLSMDFIDGLPSLNRKTTILVVVDRLSKYAHFTALSHPYTATTI 182
            P GLL PLPI   VW D+SMDFI+GLP      TILV+VDRLSKYAHF  L HP+TA  +
Sbjct: 1228 PRGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSKYAHFLTLRHPFTALMV 1287

Query: 183  ADVFVRDIVRLHGMPRAIVSDRGPVFISTFWEAFFQMQGTKLCKSSAYHPQTDGQTEVTN 362
            AD+FV+++VRLHG P +IVSDR  +F+S FW+  F++ GT L +SSAYHPQTDGQTE+ N
Sbjct: 1288 ADLFVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVN 1347

Query: 363  RTLECYLRCFAGQQPHDWTKWLPWSEWWYNTTYHSAIKMTPFQAVYSRPPPSISAYLPGT 542
            R LE YLRCF G  P  W KWLPW+E+ YNT+ H++ KM+PF+ +Y R PP +     G 
Sbjct: 1348 RALETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQ 1407

Query: 543  TVVHAVDMALRDRDRTLQLLKGHLQSAQARMKVYADSHRTERHFEVNDLVFLRLQPYRQS 722
            T V +++  L+DRD  +  L+ +L  AQ RMK YAD  RTE  F+V D VFLRLQPYRQ 
Sbjct: 1408 TSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQR 1467

Query: 723  TAASQSYSKLSPRFYGPFRIVAKIGSVAYKLALLAGCRIHPVFHVSALKLKLGEY-VTPT 899
            + A + + KL+PRFYGPF ++ +IG+ AYKL L    +IHPVFHVS LK  +G   V PT
Sbjct: 1468 SLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPT 1527

Query: 900  ANLPPLADV---FAWEPERILDRGIFKNDNKAVTRWLIQWKDHPVEEATWEDHHEFCVRF 1070
              +PP  DV      EPE +LD    +   +  T  LI+WK  P  EATWED     +RF
Sbjct: 1528 --IPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHLRF 1585

Query: 1071 PEF 1079
            P F
Sbjct: 1586 PSF 1588