BLASTX nr result

ID: Coptis25_contig00013309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013309
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155606.1| PREDICTED: ankyrin repeat domain-containing ...    67   1e-09
ref|XP_004134763.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...    67   1e-09
ref|XP_002305567.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002316534.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_003550486.1| PREDICTED: ankyrin repeat domain-containing ...    62   6e-08

>ref|XP_004155606.1| PREDICTED: ankyrin repeat domain-containing protein 13C-B-like
           [Cucumis sativus]
          Length = 603

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 9/65 (13%)
 Frame = -3

Query: 368 STTSWLDRSNSHLGA----KQNHLCT-----RESDPFSIPSDYTWTSIEDKTMKMKKSRS 216
           S+++WL RS+SH  A    KQNH C+      ESDPF+IPS YTW   +DK+ K+KKS+S
Sbjct: 539 SSSTWLRRSSSHSAAGSTAKQNHRCSWSTVQDESDPFAIPSGYTWARSDDKSSKLKKSKS 598

Query: 215 TRRGK 201
           TR+ K
Sbjct: 599 TRKSK 603


>ref|XP_004134763.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat domain-containing
           protein 13C-like [Cucumis sativus]
          Length = 602

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 9/65 (13%)
 Frame = -3

Query: 368 STTSWLDRSNSHLGA----KQNHLCT-----RESDPFSIPSDYTWTSIEDKTMKMKKSRS 216
           S+++WL RS+SH  A    KQNH C+      ESDPF+IPS YTW   +DK+ K+KKS+S
Sbjct: 538 SSSTWLRRSSSHSAAGSTAKQNHRCSWSTVQDESDPFAIPSGYTWARSDDKSSKLKKSKS 597

Query: 215 TRRGK 201
           TR+ K
Sbjct: 598 TRKSK 602


>ref|XP_002305567.1| predicted protein [Populus trichocarpa] gi|222848531|gb|EEE86078.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 7/63 (11%)
 Frame = -3

Query: 368 STTSWLDRSNSHLGAKQNHLCT-------RESDPFSIPSDYTWTSIEDKTMKMKKSRSTR 210
           S+TSWL R++S   +KQ+H  +       +++DPF+IPS YTWTS++DK+ KMKKS+S R
Sbjct: 399 SSTSWLRRNSSQSASKQHHRHSSSVGRQQQQADPFAIPSGYTWTSVDDKSSKMKKSKSVR 458

Query: 209 RGK 201
           + K
Sbjct: 459 KSK 461


>ref|XP_002316534.1| predicted protein [Populus trichocarpa] gi|222859599|gb|EEE97146.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
 Frame = -3

Query: 368 STTSWLDRSNSHLGAKQNHLCTR-------ESDPFSIPSDYTWTSIEDKTMKMKKSRSTR 210
           S+T+WL R++S   +KQ+   +        +SDPF+IPS YTWTS+++K+ KMKKS+STR
Sbjct: 396 SSTTWLQRNSSQSASKQHRHSSSVWGQQQLQSDPFAIPSGYTWTSVDEKSTKMKKSKSTR 455

Query: 209 RGK 201
           + K
Sbjct: 456 KSK 458


>ref|XP_003550486.1| PREDICTED: ankyrin repeat domain-containing protein 13B-like
           [Glycine max]
          Length = 703

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/86 (43%), Positives = 50/86 (58%)
 Frame = -3

Query: 458 SSPRHLLXXXXXXXXXXXXXXXXXXXXANRSTTSWLDRSNSHLGAKQNHLCTRESDPFSI 279
           SSPRHLL                    ++ S+T WL R+NS +  KQ  +   +SDPF I
Sbjct: 480 SSPRHLLSAAGAGRGDEEQSKAENRCSSSSSST-WLRRNNS-VSNKQRCMAF-DSDPFKI 536

Query: 278 PSDYTWTSIEDKTMKMKKSRSTRRGK 201
           P+ YTWTS++DK+ KMKKS+S R+ K
Sbjct: 537 PAGYTWTSVDDKSRKMKKSKSVRKPK 562


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