BLASTX nr result

ID: Coptis25_contig00013303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013303
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546086.1| PREDICTED: uncharacterized protein LOC100807...    94   1e-17
ref|XP_003542933.1| PREDICTED: uncharacterized protein LOC100788...    91   1e-16
emb|CBI30867.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002275370.1| PREDICTED: uncharacterized protein LOC100253...    89   4e-16
ref|NP_564344.1| uncharacterized protein [Arabidopsis thaliana] ...    89   5e-16

>ref|XP_003546086.1| PREDICTED: uncharacterized protein LOC100807088 [Glycine max]
          Length = 393

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 5/76 (6%)
 Frame = -2

Query: 221 VSVCLLLFISHSA-TTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMI 57
           VS+  LLF+SHS  TT AEDGLV+NGDFE++P+    +E + +GP  + +WK NG VE++
Sbjct: 11  VSIFTLLFLSHSPLTTFAEDGLVANGDFEVSPSSGFPNEAIVEGPSEVPNWKSNGNVELV 70

Query: 56  ESGQRQGGMILIVPQG 9
           ESGQ+QGGMILIVPQG
Sbjct: 71  ESGQKQGGMILIVPQG 86


>ref|XP_003542933.1| PREDICTED: uncharacterized protein LOC100788675 [Glycine max]
          Length = 393

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
 Frame = -2

Query: 221 VSVCLLLFISHSATTI-AEDGLVSNGDFEMAPTD----EGVRDGPVSISDWKLNGTVEMI 57
           VS+  LLF+SHS  TI AEDGLV+NGDFE  P +    E + +GP  + +WK NG VE++
Sbjct: 11  VSIFTLLFLSHSPLTISAEDGLVANGDFEATPRNGFPNEAIVEGPSEVPNWKSNGNVELV 70

Query: 56  ESGQRQGGMILIVPQG 9
           ESGQ+QGGMILIVPQG
Sbjct: 71  ESGQKQGGMILIVPQG 86


>emb|CBI30867.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
 Frame = -2

Query: 221 VSVCLLLFISHSATTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMIE 54
           VS+C++ F +H  + +A+DG + NGDFE  PT    +EG+ DGP +I +WK NGTVE++E
Sbjct: 11  VSLCVVFF-AHFVSVMADDGPLLNGDFESPPTGGFSNEGLVDGPTTIPNWKTNGTVELVE 69

Query: 53  SGQRQGGMILIVPQG 9
           SGQ+QGGMILIVPQG
Sbjct: 70  SGQKQGGMILIVPQG 84


>ref|XP_002275370.1| PREDICTED: uncharacterized protein LOC100253669 [Vitis vinifera]
          Length = 394

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
 Frame = -2

Query: 221 VSVCLLLFISHSATTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMIE 54
           VS+C++ F +H  + +A+DG + NGDFE  PT    +EG+ DGP +I +WK NGTVE++E
Sbjct: 13  VSLCVVFF-AHFVSVMADDGPLLNGDFESPPTGGFSNEGLVDGPTTIPNWKTNGTVELVE 71

Query: 53  SGQRQGGMILIVPQG 9
           SGQ+QGGMILIVPQG
Sbjct: 72  SGQKQGGMILIVPQG 86


>ref|NP_564344.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12324170|gb|AAG52057.1|AC022455_11 unknown protein;
           27870-25287 [Arabidopsis thaliana]
           gi|332193043|gb|AEE31164.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 407

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 4/75 (5%)
 Frame = -2

Query: 221 VSVCLLLFISHSATTIAEDGLVSNGDFEMAPT----DEGVRDGPVSISDWKLNGTVEMIE 54
           VSV +L+ ++   +   EDGLV NGDFE +P+    D+GV DGP  I  WK NGTVE+I 
Sbjct: 20  VSVAVLVAVADDKSPAVEDGLVINGDFETSPSSGFPDDGVTDGPSDIPSWKSNGTVELIN 79

Query: 53  SGQRQGGMILIVPQG 9
           SGQ+QGGMILIVPQG
Sbjct: 80  SGQKQGGMILIVPQG 94


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