BLASTX nr result

ID: Coptis25_contig00013301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013301
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514063.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002279935.1| PREDICTED: uncharacterized protein LOC100243...    93   4e-17
ref|XP_002330483.1| predicted protein [Populus trichocarpa] gi|2...    93   4e-17
gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]       92   9e-17
gb|ABK94669.1| unknown [Populus trichocarpa]                           92   9e-17

>ref|XP_002514063.1| conserved hypothetical protein [Ricinus communis]
           gi|223546519|gb|EEF48017.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 121

 Score =  100 bits (250), Expect = 2e-19
 Identities = 67/124 (54%), Positives = 73/124 (58%)
 Frame = -3

Query: 520 MASTSAVSMAMPITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXSRLQVNASLKEK 341
           MASTSAVSMAMPITSAS K +PSS  AFFKPLP+RQ             + QV ASLKEK
Sbjct: 1   MASTSAVSMAMPITSASQKKVPSSE-AFFKPLPLRQSKAVMASKSNG--KFQVKASLKEK 57

Query: 340 XXXXXXXXXXXXXXVIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXVSNFDP 161
                         VIPEVA+AA SGVSPSLKNFLLS                 V+NFDP
Sbjct: 58  AITGLTAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIVAGGVVLTAIVGAIIGVANFDP 117

Query: 160 VKRT 149
           VKR+
Sbjct: 118 VKRS 121


>ref|XP_002279935.1| PREDICTED: uncharacterized protein LOC100243957 [Vitis vinifera]
          Length = 123

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 60/124 (48%), Positives = 69/124 (55%)
 Frame = -3

Query: 520 MASTSAVSMAMPITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXSRLQVNASLKEK 341
           MAST AVSMAMP+TSA+   L   S AFF+PLPVR              + +V ASLKEK
Sbjct: 1   MASTLAVSMAMPMTSATQTRL-QGSEAFFRPLPVRPSKSMAAASSKSSGKFEVRASLKEK 59

Query: 340 XXXXXXXXXXXXXXVIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXVSNFDP 161
                         VIPEVA+AADSG+SPSLKNFLLS                 V+NFDP
Sbjct: 60  AVTGLTAAALAASMVIPEVAEAADSGLSPSLKNFLLSIAAGGVVLVVIVGAVIGVANFDP 119

Query: 160 VKRT 149
           VKR+
Sbjct: 120 VKRS 123


>ref|XP_002330483.1| predicted protein [Populus trichocarpa] gi|222872417|gb|EEF09548.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 63/124 (50%), Positives = 68/124 (54%)
 Frame = -3

Query: 520 MASTSAVSMAMPITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXSRLQVNASLKEK 341
           MASTSAVSMAMP+T AS K  P+S  AFFKPLPVR              R QV ASLKEK
Sbjct: 1   MASTSAVSMAMPLTHASRKAAPTSE-AFFKPLPVRPSKAIAAASRCNG-RFQVKASLKEK 58

Query: 340 XXXXXXXXXXXXXXVIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXVSNFDP 161
                         VIPEVA+AA  GVSPSL NFLLS                 VSNFDP
Sbjct: 59  VVTGLTAGALTVSMVIPEVAEAAGPGVSPSLNNFLLSIVAGGVVLAAIAGAVVGVSNFDP 118

Query: 160 VKRT 149
           V+R+
Sbjct: 119 VRRS 122


>gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 121

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 62/123 (50%), Positives = 68/123 (55%)
 Frame = -3

Query: 520 MASTSAVSMAMPITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXSRLQVNASLKEK 341
           MASTSAVSMA+P+T AS K +P+S  AFFKPLP R              R QV ASLKEK
Sbjct: 1   MASTSAVSMALPLTYASQKRVPASE-AFFKPLPARPSKAMSASKSSG--RFQVKASLKEK 57

Query: 340 XXXXXXXXXXXXXXVIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXVSNFDP 161
                         VIPEVA+AA +G SPSLKNFLLS                 VSNFDP
Sbjct: 58  LVTGLTAGALTASMVIPEVAEAAGAGTSPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDP 117

Query: 160 VKR 152
           VKR
Sbjct: 118 VKR 120


>gb|ABK94669.1| unknown [Populus trichocarpa]
          Length = 121

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 62/123 (50%), Positives = 68/123 (55%)
 Frame = -3

Query: 520 MASTSAVSMAMPITSASNKGLPSSSSAFFKPLPVRQXXXXXXXXXXXXSRLQVNASLKEK 341
           MASTSAVSMA+P+T AS K +P+S  AFFKPLP R              R QV ASLKEK
Sbjct: 1   MASTSAVSMALPLTYASQKRVPASE-AFFKPLPARPSKAMSASKSSG--RFQVKASLKEK 57

Query: 340 XXXXXXXXXXXXXXVIPEVAQAADSGVSPSLKNFLLSXXXXXXXXXXXXXXXXXVSNFDP 161
                         VIPEVA+AA +G SPSLKNFLLS                 VSNFDP
Sbjct: 58  LVTGLTAGALTASMVIPEVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDP 117

Query: 160 VKR 152
           VKR
Sbjct: 118 VKR 120


Top