BLASTX nr result

ID: Coptis25_contig00013300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013300
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi...   177   2e-42
ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine ...   177   2e-42
ref|XP_003532539.1| PREDICTED: golgin candidate 2-like [Glycine ...   175   9e-42
ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|35...   174   1e-41
ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40

>ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera]
          Length = 682

 Score =  177 bits (449), Expect = 2e-42
 Identities = 92/126 (73%), Positives = 105/126 (83%)
 Frame = -2

Query: 687 VEVIKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYT 508
           V  IKE EN+VARLEGEK+SLEKILEER KQQAQEASELQ TMMETM AV+LEKQKH+ T
Sbjct: 349 VAAIKERENMVARLEGEKESLEKILEEREKQQAQEASELQTTMMETMEAVELEKQKHNNT 408

Query: 507 RMEAFTRLTKLETTNADLAKSLATIQWNLEIESKQVADIRQQIDVKEAIQEDLRRRILNI 328
           RMEA  RL KLET NA+LA+SLAT QWNLE+E  +VA+IRQQI++KE   E+ RRRI N 
Sbjct: 409 RMEALARLAKLETVNAELARSLATAQWNLEVEVNRVAEIRQQIELKEVALEEQRRRIPNA 468

Query: 327 HQHGSS 310
           HQ G+S
Sbjct: 469 HQMGTS 474


>ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine max]
          Length = 689

 Score =  177 bits (448), Expect = 2e-42
 Identities = 91/137 (66%), Positives = 107/137 (78%)
 Frame = -2

Query: 687 VEVIKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYT 508
           +  IKE ENIVA+LEGEK+SLEKILEERAKQQAQEAS+LQ T METM AV+LEKQKH+ T
Sbjct: 349 INAIKERENIVAKLEGEKESLEKILEERAKQQAQEASQLQSTTMETMEAVELEKQKHNNT 408

Query: 507 RMEAFTRLTKLETTNADLAKSLATIQWNLEIESKQVADIRQQIDVKEAIQEDLRRRILNI 328
           RME   RL KLET NADLA+SLA +QWNLE+E KQVA++RQQI  KE   E+LRRR+ N 
Sbjct: 409 RMEVLARLAKLETANADLARSLAAVQWNLEVEVKQVAELRQQITSKELFHEELRRRMTNP 468

Query: 327 HQHGSSPKEQARHALSL 277
            Q G+S  + A   + L
Sbjct: 469 RQTGASQNQLASKGVEL 485


>ref|XP_003532539.1| PREDICTED: golgin candidate 2-like [Glycine max]
          Length = 689

 Score =  175 bits (443), Expect = 9e-42
 Identities = 89/137 (64%), Positives = 108/137 (78%)
 Frame = -2

Query: 687 VEVIKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYT 508
           +  IKE ENIVA+LEGEK+SLEKILEERAKQQAQEAS+LQ TMMETM AV+LEKQKH+ T
Sbjct: 349 INAIKERENIVAKLEGEKESLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNT 408

Query: 507 RMEAFTRLTKLETTNADLAKSLATIQWNLEIESKQVADIRQQIDVKEAIQEDLRRRILNI 328
           RME   RL KLET NADLA+SLA +QW+LE+E KQV+++RQQI  KE   E+LRRR+ N 
Sbjct: 409 RMEVLARLAKLETVNADLARSLAAVQWSLEVEVKQVSELRQQISSKELFHEELRRRMKNP 468

Query: 327 HQHGSSPKEQARHALSL 277
            Q G+S  +    ++ L
Sbjct: 469 RQTGASQNQLVSKSVEL 485


>ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|355525116|gb|AET05570.1|
           Golgin candidate [Medicago truncatula]
          Length = 667

 Score =  174 bits (442), Expect = 1e-41
 Identities = 88/131 (67%), Positives = 109/131 (83%)
 Frame = -2

Query: 687 VEVIKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYT 508
           + VIKE EN+VA+LEGEK+SLEKILEERAKQQAQEAS+LQ TMMETM AV+LEKQKH+ T
Sbjct: 328 INVIKEKENMVAKLEGEKESLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNT 387

Query: 507 RMEAFTRLTKLETTNADLAKSLATIQWNLEIESKQVADIRQQIDVKEAIQEDLRRRILNI 328
           RME  TRL KLET NADLA+SL  +QWNLE+E KQVA++RQ++  KE++ E+LRR + N 
Sbjct: 388 RMEILTRLAKLETANADLARSLTAVQWNLEVEVKQVAELRQKMASKESVHEELRRSLRNP 447

Query: 327 HQHGSSPKEQA 295
           +Q G+S  + A
Sbjct: 448 NQTGASRNQLA 458


>ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|222869090|gb|EEF06221.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  170 bits (431), Expect = 2e-40
 Identities = 90/122 (73%), Positives = 100/122 (81%)
 Frame = -2

Query: 687 VEVIKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYT 508
           V+ I E EN+VARLEGEKQSLEKILEERAKQQ QEASELQ T METM AVDLEKQKH+ T
Sbjct: 216 VQAIIERENMVARLEGEKQSLEKILEERAKQQVQEASELQTTTMETMEAVDLEKQKHNNT 275

Query: 507 RMEAFTRLTKLETTNADLAKSLATIQWNLEIESKQVADIRQQIDVKEAIQEDLRRRILNI 328
           RME  +RL KLETTNADLA+SLAT Q NLE+E  QVA++RQQ ++KE   EDLRRRI   
Sbjct: 276 RMEVLSRLAKLETTNADLARSLATAQKNLELEINQVAELRQQFELKEVALEDLRRRISKT 335

Query: 327 HQ 322
           HQ
Sbjct: 336 HQ 337


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