BLASTX nr result

ID: Coptis25_contig00013278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013278
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334160.1| predicted protein [Populus trichocarpa] gi|2...    48   7e-10
ref|XP_002530398.1| UDP-glucuronosyltransferase, putative [Ricin...    50   1e-09
ref|XP_003552854.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glycosyl...    44   9e-09
ref|XP_003537476.1| PREDICTED: UDP-glycosyltransferase 76F1-like...    44   9e-09
ref|XP_002281324.1| PREDICTED: UDP-glycosyltransferase 76C4 [Vit...    50   2e-08

>ref|XP_002334160.1| predicted protein [Populus trichocarpa]
           gi|224112637|ref|XP_002316247.1| predicted protein
           [Populus trichocarpa] gi|222865287|gb|EEF02418.1|
           predicted protein [Populus trichocarpa]
           gi|222869921|gb|EEF07052.1| predicted protein [Populus
           trichocarpa]
          Length = 466

 Score = 47.8 bits (112), Expect(2) = 7e-10
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +3

Query: 81  SELEAPVRELAPPKLKDLPLIKTHNSEVFFQLDADMTNQTKASSG 215
           S+LE P+ EL P K+KDLP+I + + E  + L   MTN TKASSG
Sbjct: 168 SQLEDPMVELPPLKVKDLPVINSRDPESVYDLIVSMTNGTKASSG 212



 Score = 40.8 bits (94), Expect(2) = 7e-10
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +2

Query: 299 FPVNPFHKFSPSSCNSLVTQELIELHFLAQHTXXXXXXXXXXXXA*P*FHETQLVEIALG 478
           FP+ PFH   PSS +SL+TQ+   + +L +              A    +ET+ +E+A G
Sbjct: 238 FPIGPFHNRFPSSSSSLLTQDQSSISWLDKQAPKSVVYVSFGSVA--ALNETEFLEVAWG 295

Query: 479 LVNSEQ 496
           L NS+Q
Sbjct: 296 LANSKQ 301


>ref|XP_002530398.1| UDP-glucuronosyltransferase, putative [Ricinus communis]
           gi|223530047|gb|EEF31968.1| UDP-glucuronosyltransferase,
           putative [Ricinus communis]
          Length = 457

 Score = 50.1 bits (118), Expect(2) = 1e-09
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +3

Query: 81  SELEAPVRELAPPKLKDLPLIKTHNSEVFFQLDADMTNQTKASSG 215
           S+LE PV+E  P K+KD+P+I T + E  +QL  +M N+T+ASSG
Sbjct: 159 SKLEEPVKEFPPLKVKDIPVINTCHQEDLYQLVVNMVNETRASSG 203



 Score = 37.4 bits (85), Expect(2) = 1e-09
 Identities = 24/66 (36%), Positives = 35/66 (53%)
 Frame = +2

Query: 299 FPVNPFHKFSPSSCNSLVTQELIELHFLAQHTXXXXXXXXXXXXA*P*FHETQLVEIALG 478
           FP+ PFHK S  S +SL+ Q+   + +L + T            A    ++T+L EIA G
Sbjct: 229 FPIGPFHKCSLPSSSSLLVQDESCISWLDKQTPKSVIYVSFGSIA--AINDTELSEIAWG 286

Query: 479 LVNSEQ 496
           L NS+Q
Sbjct: 287 LANSKQ 292


>ref|XP_003552854.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glycosyltransferase 76F1-like
           [Glycine max]
          Length = 404

 Score = 43.5 bits (101), Expect(2) = 9e-09
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +2

Query: 299 FPVNPFHKFSPS-SCNSLVTQELIELHFLAQHTXXXXXXXXXXXXA*P*FHETQLVEIAL 475
           FP+ PFHK+SPS S +SL++Q+   + +L +HT            A     ET+ +EIA 
Sbjct: 174 FPIGPFHKYSPSPSYSSLISQDQSCISWLDKHTPKSLVFVSFGSVA--AITETEFIEIAW 231

Query: 476 GLVNSE 493
           GLVN++
Sbjct: 232 GLVNNK 237



 Score = 41.2 bits (95), Expect(2) = 9e-09
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = +3

Query: 84  ELEAPVRELAPPKLKDLPLIKTHNSEVFFQLDADMTNQTKAS 209
           +LE PV EL P ++KDLP+IKT   E +++L      +TK S
Sbjct: 105 KLEEPVEELPPLRVKDLPMIKTEEPEKYYELLRMFVKETKGS 146


>ref|XP_003537476.1| PREDICTED: UDP-glycosyltransferase 76F1-like [Glycine max]
          Length = 401

 Score = 43.5 bits (101), Expect(2) = 9e-09
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = +2

Query: 299 FPVNPFHKFSPSS---CNSLVTQELIELHFLAQHTXXXXXXXXXXXXA*P*FHETQLVEI 469
           FP+ PFHK+ PSS   C+SL++Q+   + +L  HT            A     ET  +EI
Sbjct: 169 FPIGPFHKYFPSSSSFCSSLISQDRSCISWLDSHTPNSVMYVSFGSVA--AITETNFLEI 226

Query: 470 ALGLVNS 490
           A GLVNS
Sbjct: 227 AWGLVNS 233



 Score = 41.2 bits (95), Expect(2) = 9e-09
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = +3

Query: 84  ELEAPVRELAPPKLKDLPLIKTHNSEVFFQLDADMTNQTKASSG 215
           +LE PV EL P ++KDLP+IKT   E +++L      ++K+S G
Sbjct: 100 KLEEPVEELPPLRVKDLPMIKTEEPEKYYELLHIFVKESKSSLG 143


>ref|XP_002281324.1| PREDICTED: UDP-glycosyltransferase 76C4 [Vitis vinifera]
          Length = 462

 Score = 49.7 bits (117), Expect(2) = 2e-08
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = +3

Query: 81  SELEAPVRELAPPKLKDLPLIKTHNSEVFFQLDADMTNQTKASSG 215
           S+LE+ V EL P K+KDLP+I T N E F+QL      +TKASSG
Sbjct: 166 SQLESSVPELLPLKVKDLPVINTRNPEDFYQLFVSAIKETKASSG 210



 Score = 33.9 bits (76), Expect(2) = 2e-08
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +2

Query: 299 FPVNPFHKFSPSSCNSLVTQELIELHFLAQHTXXXXXXXXXXXXA*P*FHETQLVEIALG 478
           FPV PF K+ P+S +SL+  +   + +L   T            A     E + +E+A G
Sbjct: 236 FPVGPFQKYFPTSSSSLLAHDHSSITWLDTQTPKSVIYVSFGSIA--TMDENEFLEMAWG 293

Query: 479 LVNSEQ 496
           L NS Q
Sbjct: 294 LANSNQ 299


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