BLASTX nr result

ID: Coptis25_contig00013274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013274
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...   260   5e-67
ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|2...   250   5e-64
ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257...   229   1e-57
gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indi...   226   7e-57
ref|XP_002516098.1| conserved hypothetical protein [Ricinus comm...   226   1e-56

>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
            vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
            product [Vitis vinifera]
          Length = 239

 Score =  260 bits (665), Expect = 5e-67
 Identities = 134/236 (56%), Positives = 167/236 (70%), Gaps = 14/236 (5%)
 Frame = -1

Query: 1225 MGDSYWRYGAGAGVPERDGVPRASFPGYVSSEASFLSSHHL--ANDLRGTSSDYLQKDIL 1052
            M D YWR GA +   +R  +PR+SFPGY+  + S  ++HHL   NDL G  SDY  KDIL
Sbjct: 1    MADPYWRRGAPS---DRGSIPRSSFPGYLPLDPSVSAAHHLWGTNDLHGAPSDYPPKDIL 57

Query: 1051 PLRPGAYGLDTFAGLASHTAPGFSGLTSGASLKGFPSPLEDPALS----------SRGIP 902
            P+RPGA+  D   G+     P   G T+  ++KG+P+P+EDP L           S GIP
Sbjct: 58   PVRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIP 117

Query: 901  ELLNERPSSLRKIDSVLG--EESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEP 728
            ++  ERPSS   ++S+    +ES+ILFVDGLP DCTRRE+ HLFRPFIGFKE+R+VHKEP
Sbjct: 118  DI--ERPSSFGNVESLPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEP 175

Query: 727  RHSRDKAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPS 560
            RHS DKAMVLCFVEF+DA C+ TA+EALQGYKFD+KKPD+P L+IQFA FPF  PS
Sbjct: 176  RHSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPS 231


>ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|222854516|gb|EEE92063.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  250 bits (639), Expect = 5e-64
 Identities = 140/277 (50%), Positives = 176/277 (63%), Gaps = 47/277 (16%)
 Frame = -1

Query: 1225 MGDSYWRYGAGAGVPERDGVPRASFPGYVSSEASFLSSHH--LANDLRGTSSDYLQKDIL 1052
            M + Y  Y A   + +R  V R SFPGYVS+EA  L+SH   ++ +  G SSD+LQ+DI 
Sbjct: 1    MAEPYNMYDA---LQDRGSVSRLSFPGYVSTEAPPLASHSFPVSTEFPGASSDFLQRDIN 57

Query: 1051 PLRPGAYGLDTFAGLASHTAPGFSGLTSGASLKGFPSPLEDPAL---------------- 920
            PL+ G+YGL+ ++G+     P   G+  GAS KG+ SPLEDP+L                
Sbjct: 58   PLQLGSYGLNGYSGVGFRPEPVIGGVMPGASGKGYSSPLEDPSLLAQRGDASMHAIGGAI 117

Query: 919  ------------------SSRG---------IPELLNERPSSLRKIDS--VLGEESSILF 827
                              S RG         IP+++N+RP SLR  D   V   ES+ILF
Sbjct: 118  PGSTGKGYPSPLEDPSLLSQRGDASVRVTAAIPDMINDRPGSLRSADGPPVPKGESNILF 177

Query: 826  VDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEFSDAKCALTAMEA 647
            VDGLP+DCTRRE+ HLFRPFIG+KE+R+VHKE R S D+A VLCFVEF+DA CA TAMEA
Sbjct: 178  VDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCAATAMEA 237

Query: 646  LQGYKFDEKKPDAPILKIQFAQFPFCPPSSRDDQRLG 536
            LQGYKFD+KKPD+P LKIQFA+FPF PPS RD +R+G
Sbjct: 238  LQGYKFDDKKPDSPTLKIQFARFPFRPPSDRDGKRIG 274


>ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
            vinifera]
          Length = 229

 Score =  229 bits (584), Expect = 1e-57
 Identities = 123/236 (52%), Positives = 157/236 (66%), Gaps = 14/236 (5%)
 Frame = -1

Query: 1225 MGDSYWRYGAGAGVPERDGVPRASFPGYVSSEASFLSSHHL--ANDLRGTSSDYLQKDIL 1052
            M D YWR GA +   +R  +PR+SFPGY+  + S  ++HHL   NDL G  SDY  KDIL
Sbjct: 1    MADPYWRRGAPS---DRGSIPRSSFPGYLPLDPSVSAAHHLWGTNDLHGAPSDYPPKDIL 57

Query: 1051 PLRPGAYGLDTFAGLASHTAPGFSGLTSGASLKGFPSPLEDPALS----------SRGIP 902
            P+RPGA+  D   G+     P   G T+  ++KG+P+P+EDP L           S GIP
Sbjct: 58   PVRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIP 117

Query: 901  ELLNERPSSLRKIDSVLG--EESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEP 728
            ++  ERPSS   ++S+    +ES+ILFVDGLP DCTRRE+           ++R+VHKEP
Sbjct: 118  DI--ERPSSFGNVESLPPPVQESNILFVDGLPKDCTRREVG----------QIRVVHKEP 165

Query: 727  RHSRDKAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPS 560
            RHS DKAMVLCFVEF+DA C+ TA+EALQGYKFD+KKPD+P L+IQFA FPF  PS
Sbjct: 166  RHSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPS 221


>gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
          Length = 232

 Score =  226 bits (577), Expect = 7e-57
 Identities = 128/236 (54%), Positives = 160/236 (67%), Gaps = 8/236 (3%)
 Frame = -1

Query: 1225 MGDSYWRYGAGAGVPERDGVPRASFPGYVSSEASFLSSHHLANDLRGTSSDYLQKDILPL 1046
            M D Y  Y   + +  RD  P+  FP +  SE S+ +S   A  L GTS D L+ D+ PL
Sbjct: 1    MADPYRAYAPPSSLG-RD--PQGDFPRHPPSEGSYYASRMAA--LHGTS-DILRHDV-PL 53

Query: 1045 RPGAYGLDTFAGLASHTAPGFSGLTSGASLKGFPSPLEDPALSSRG--------IPELLN 890
            +P AYGLD  AG +     G  GL +G + +G PSPLEDPAL  R         IP++  
Sbjct: 54   QPRAYGLDGAAGASHPALAGLGGLAAGTTARG-PSPLEDPALVRRSSSLGKTASIPDV-- 110

Query: 889  ERPSSLRKIDSVLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDK 710
            E P  L  +D    +ES+ILFVDGLP+DCTRRE+AHLFRPF+GFK++RLVHKEPRHS D+
Sbjct: 111  EHPRPLLNLDGPREDESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSSDR 170

Query: 709  AMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPSSRDDQR 542
            A VLCFVEFSDAKCA+TAMEALQ Y+FDE+KPDA +L I+FA+FPF P ++  D R
Sbjct: 171  AYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAVLNIKFARFPFRPAAAPHDDR 226


>ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
            gi|223544584|gb|EEF46100.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 243

 Score =  226 bits (575), Expect = 1e-56
 Identities = 124/252 (49%), Positives = 175/252 (69%), Gaps = 19/252 (7%)
 Frame = -1

Query: 1225 MGDSYWRYGAGAGVPERDGVPRASFPGYVSS--EASFLSSHHLANDLRGTSSDYLQKDIL 1052
            M D Y+RYGA   +P+R GV   + PGY+SS  EA  L+S +  ND R ++SD+L+++I 
Sbjct: 1    MADPYYRYGA---LPDR-GV--YNHPGYLSSSAEAPHLASSNHINDFRDSASDFLRREIT 54

Query: 1051 PLR-PGAYGLDTFAGLASHTAPGFSGLTSGASLKGFPSPLEDPALSSR------------ 911
            PLR P +YGL+      +   P  SG+  GAS +G+ SPL DP+L S             
Sbjct: 55   PLRQPVSYGLNNSN---NDDIPVRSGVIPGASSRGYLSPLNDPSLPSHRLRDTSVNVTTL 111

Query: 910  GIPELLNERPSSLRKID----SVLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRL 743
             IP+++N++P +  +I+    SV   ES+ILFVDGLP+DCTRRE+ HLFRPFIG+K++++
Sbjct: 112  AIPDVINDQPPNYLRINADSPSVSRTESNILFVDGLPTDCTRREVGHLFRPFIGYKDIKV 171

Query: 742  VHKEPRHSRDKAMVLCFVEFSDAKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPP 563
            +H+EPR   DKAMV CFVEF+DAKCA+TAMEALQGYKFD+++ ++P+L+I  A+FPF PP
Sbjct: 172  IHREPRRDGDKAMVYCFVEFADAKCAITAMEALQGYKFDDRRSNSPVLRIHLARFPFRPP 231

Query: 562  SSRDDQRLGDPR 527
              R++Q +  PR
Sbjct: 232  HDRNEQPVAIPR 243


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