BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013272
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24272.3| unnamed protein product [Vitis vinifera]              235   3e-60
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   235   3e-60
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   189   2e-46
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g...   164   7e-39

>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  235 bits (599), Expect = 3e-60
 Identities = 109/141 (77%), Positives = 129/141 (91%)
 Frame = -3

Query: 440 ALPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARG 261
           +L GACRIHCNP+LAEYAA YLFELEP  SGNY+L+ANIYSAAGRW DAA+IR LMK RG
Sbjct: 531 SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 590

Query: 260 VTKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLE 81
           VTKPPGCSWIEVKR++HSF+VGDTSH L+++ISAKM +LY +IKEIGYVPDT +VLQ+++
Sbjct: 591 VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVD 650

Query: 80  EDEKEDSLCGHSKKLAIAFGL 18
           EDEKE SLCGHS+K+A+AFGL
Sbjct: 651 EDEKEFSLCGHSEKIALAFGL 671


>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  235 bits (599), Expect = 3e-60
 Identities = 109/141 (77%), Positives = 129/141 (91%)
 Frame = -3

Query: 440  ALPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARG 261
            +L GACRIHCNP+LAEYAA YLFELEP  SGNY+L+ANIYSAAGRW DAA+IR LMK RG
Sbjct: 774  SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 833

Query: 260  VTKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLE 81
            VTKPPGCSWIEVKR++HSF+VGDTSH L+++ISAKM +LY +IKEIGYVPDT +VLQ+++
Sbjct: 834  VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVD 893

Query: 80   EDEKEDSLCGHSKKLAIAFGL 18
            EDEKE SLCGHS+K+A+AFGL
Sbjct: 894  EDEKEFSLCGHSEKIALAFGL 914


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  189 bits (481), Expect = 2e-46
 Identities = 93/141 (65%), Positives = 110/141 (78%)
 Frame = -3

Query: 440  ALPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARG 261
            +L GACRIHCNP+LAEYAA YLFELEP  SGNY+L+ANIYSAAGRW DAA+IR LMK RG
Sbjct: 774  SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 833

Query: 260  VTKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLE 81
            VTKPPGCSWIEVKR++HSF+VGDTSH L+++IS K   L                  +++
Sbjct: 834  VTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKL------------------DVD 875

Query: 80   EDEKEDSLCGHSKKLAIAFGL 18
            EDEKE SLCGHS+K+A+AFGL
Sbjct: 876  EDEKEFSLCGHSEKIALAFGL 896


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/140 (55%), Positives = 103/140 (73%)
 Frame = -3

Query: 437 LPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARGV 258
           L GACR+H N +LA YAA  + ELEP  +G YILL+NIY+   RW D A +R+ M  RG+
Sbjct: 426 LLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGI 485

Query: 257 TKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLEE 78
            K PGCSWIEV +++H FI+GDTSH  ++EI  ++N+L   +  +GYVPDT +VLQ+LE 
Sbjct: 486 RKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEG 545

Query: 77  DEKEDSLCGHSKKLAIAFGL 18
           ++KEDSL  HS+KLAI FGL
Sbjct: 546 EQKEDSLRYHSEKLAIMFGL 565


>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
            gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|218190072|gb|EEC72499.1| hypothetical protein
            OsI_05871 [Oryza sativa Indica Group]
            gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
            Japonica Group]
          Length = 922

 Score =  164 bits (415), Expect = 7e-39
 Identities = 71/141 (50%), Positives = 106/141 (75%)
 Frame = -3

Query: 440  ALPGACRIHCNPELAEYAAGYLFELEPTYSGNYILLANIYSAAGRWGDAARIRRLMKARG 261
            AL GAC+IH N E+ + AA  LF +EP+ +GNY++L+NIYS+ G WG+ A +R++MK +G
Sbjct: 724  ALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQG 783

Query: 260  VTKPPGCSWIEVKRRVHSFIVGDTSHSLVDEISAKMNNLYSEIKEIGYVPDTKYVLQNLE 81
            V K PGCSW ++K ++HSF+ GD  H  ++EI A +  LY+ +K  GYVPDT++VL +++
Sbjct: 784  VIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDID 843

Query: 80   EDEKEDSLCGHSKKLAIAFGL 18
            E++KE SL  HS+KLA+A+ L
Sbjct: 844  EEQKESSLLYHSEKLAVAYCL 864