BLASTX nr result

ID: Coptis25_contig00013261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013261
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW89467.1| low molecular weight heat shock protein [Gossypiu...    80   2e-23
ref|NP_001235293.1| 17.3 kDa class I heat shock protein [Glycine...    86   2e-23
gb|ADU55794.1| HSP18.1B [Citrullus lanatus]                            80   5e-23
ref|XP_004150236.1| PREDICTED: 17.6 kDa class I heat shock prote...    86   6e-23
ref|XP_002315187.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-22

>gb|ABW89467.1| low molecular weight heat shock protein [Gossypium hirsutum]
          Length = 158

 Score = 79.7 bits (195), Expect(2) = 2e-23
 Identities = 39/57 (68%), Positives = 44/57 (77%)
 Frame = -1

Query: 401 RVLQISGERNKEKEEKNDTWHRIEXXXXXXXXXXXLPENAKVDEVKASMENGVLTVT 231
           RVLQISGERN EKE+K DTWHR+E           LPENAK+D++KASMENGVLTVT
Sbjct: 84  RVLQISGERNVEKEDKKDTWHRVERSSGKFMRRFRLPENAKMDQIKASMENGVLTVT 140



 Score = 56.2 bits (134), Expect(2) = 2e-23
 Identities = 31/57 (54%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = -2

Query: 652 MSLIPSFFGGRRN---DPFSLDVLDXXXXXXXXXXXXXXPRSDETTQFANTRIDWKE 491
           MSLIPSFFG RR+   DPFSLDV D                S ET+ F NTRIDWKE
Sbjct: 1   MSLIPSFFGNRRSSAFDPFSLDVWDPFKDFPFSSPSSLSTGSSETSAFVNTRIDWKE 57


>ref|NP_001235293.1| 17.3 kDa class I heat shock protein [Glycine max]
           gi|123534|sp|P02519.1|HSP11_SOYBN RecName: Full=17.3 kDa
           class I heat shock protein; AltName: Full=HSP 17.3
           gi|18656|emb|CAA25578.1| unnamed protein product
           [Glycine max] gi|255631032|gb|ACU15880.1| unknown
           [Glycine max] gi|224205|prf||1012218B protein 6871,heat
           shock
          Length = 153

 Score = 85.9 bits (211), Expect(2) = 2e-23
 Identities = 43/58 (74%), Positives = 46/58 (79%)
 Frame = -1

Query: 404 GRVLQISGERNKEKEEKNDTWHRIEXXXXXXXXXXXLPENAKVDEVKASMENGVLTVT 231
           GRVLQISGERN EKE+KNDTWHR+E           LPENAKVD+VKASMENGVLTVT
Sbjct: 78  GRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVT 135



 Score = 49.7 bits (117), Expect(2) = 2e-23
 Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = -2

Query: 652 MSLIPSFFGGRRN---DPFSLDVLDXXXXXXXXXXXXXXPRSDETTQFANTRIDWKE 491
           MSLIPSFFGGRR+   DPFSLDV D                S E + F +TR+DWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSL-----SAENSAFVSTRVDWKE 52


>gb|ADU55794.1| HSP18.1B [Citrullus lanatus]
          Length = 159

 Score = 80.5 bits (197), Expect(2) = 5e-23
 Identities = 41/58 (70%), Positives = 46/58 (79%)
 Frame = -1

Query: 404 GRVLQISGERNKEKEEKNDTWHRIEXXXXXXXXXXXLPENAKVDEVKASMENGVLTVT 231
           GRVLQISGER+KE+EEKN+ WHRIE           LPE+AKV+EVKASMENGVLTVT
Sbjct: 84  GRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDAKVEEVKASMENGVLTVT 141



 Score = 53.9 bits (128), Expect(2) = 5e-23
 Identities = 33/58 (56%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
 Frame = -2

Query: 652 MSLIPSFFGGRRN---DPFSLDVLDXXXXXXXXXXXXXXPRSD-ETTQFANTRIDWKE 491
           MSLIPSFFGGRR+   DPFSLD+ D              P S  ET+ FANTRIDWKE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSSALETSAFANTRIDWKE 58


>ref|XP_004150236.1| PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis
           sativus] gi|449528114|ref|XP_004171051.1| PREDICTED:
           17.6 kDa class I heat shock protein 3-like [Cucumis
           sativus]
          Length = 156

 Score = 85.5 bits (210), Expect(2) = 6e-23
 Identities = 44/58 (75%), Positives = 46/58 (79%)
 Frame = -1

Query: 404 GRVLQISGERNKEKEEKNDTWHRIEXXXXXXXXXXXLPENAKVDEVKASMENGVLTVT 231
           GRVLQISGER+KE+EEKND WHRIE           LPENAKVDEVKASMENGVLTVT
Sbjct: 79  GRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAKVDEVKASMENGVLTVT 136



 Score = 48.5 bits (114), Expect(2) = 6e-23
 Identities = 31/57 (54%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -2

Query: 652 MSLIPSFFGGRRN---DPFSLDVLDXXXXXXXXXXXXXXPRSDETTQFANTRIDWKE 491
           MSLIPSFFGGRR    DPFSLD  D              P S     FANTRIDWKE
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSS----AFANTRIDWKE 53


>ref|XP_002315187.1| predicted protein [Populus trichocarpa] gi|222864227|gb|EEF01358.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 80.9 bits (198), Expect(2) = 1e-22
 Identities = 39/58 (67%), Positives = 46/58 (79%)
 Frame = -1

Query: 404 GRVLQISGERNKEKEEKNDTWHRIEXXXXXXXXXXXLPENAKVDEVKASMENGVLTVT 231
           GRVLQISGER+KE+EEKND WHR+E           LPENAK+D++KA+MENGVLTVT
Sbjct: 87  GRVLQISGERSKEREEKNDKWHRVERSSGKFLRRFRLPENAKLDQLKANMENGVLTVT 144



 Score = 52.4 bits (124), Expect(2) = 1e-22
 Identities = 34/61 (55%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
 Frame = -2

Query: 652 MSLIPS-FFGGRRN---DPFSLDVLDXXXXXXXXXXXXXXPRSD---ETTQFANTRIDWK 494
           MSLIPS  FGGRR+   DPFSLD+ D              PRS+   ETT FANTRIDWK
Sbjct: 1   MSLIPSTLFGGRRSNIFDPFSLDIWDPFQDFPFTSTAISAPRSEFANETTAFANTRIDWK 60

Query: 493 E 491
           E
Sbjct: 61  E 61


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