BLASTX nr result

ID: Coptis25_contig00013250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013250
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isofor...   376   e-102
ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis...   376   e-102
ref|XP_002522248.1| protein with unknown function [Ricinus commu...   375   e-102
ref|XP_002317396.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [...   368   e-99 

>ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
           gi|147834751|emb|CAN75016.1| hypothetical protein
           VITISV_035368 [Vitis vinifera]
          Length = 218

 Score =  376 bits (966), Expect = e-102
 Identities = 189/238 (79%), Positives = 210/238 (88%)
 Frame = -1

Query: 927 MAGYKADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFANRSLTVDGK 748
           MAGY+A++DYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFA R+L VDGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 747 VVKAQVWDTAGQXXXXXXXXXXXXXXXXDTAGQERYRAITSAYYRGAVGALLVYDVTRHA 568
           V+KAQ+WDTAGQ                     ERYRAITSAYYRGAVGALLVYDVTRHA
Sbjct: 61  VIKAQIWDTAGQ---------------------ERYRAITSAYYRGAVGALLVYDVTRHA 99

Query: 567 TFENTERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKTFAETESLYFMETSALD 388
           TFEN +RWLKELR+HTDPNIVVML+GNKSDLRHLVAVSTEDGKT+AE ESLYFMETSAL+
Sbjct: 100 TFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALE 159

Query: 387 ATNVENAFAEVLTQIYHIVSRRTVETGDDGAASNVPSKGEKIHVKDDVSALKRIGCCS 214
           ATNVENAFAEVLTQIY IVS+++VE GD+GAAS+VP+KGE+I+VKDD SALKR+GCCS
Sbjct: 160 ATNVENAFAEVLTQIYRIVSKKSVEGGDEGAASSVPAKGERINVKDDASALKRVGCCS 217


>ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
          Length = 218

 Score =  376 bits (965), Expect = e-102
 Identities = 191/239 (79%), Positives = 207/239 (86%)
 Frame = -1

Query: 927 MAGYKADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFANRSLTVDGK 748
           MAGY+A++DYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFA RSL VDGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 747 VVKAQVWDTAGQXXXXXXXXXXXXXXXXDTAGQERYRAITSAYYRGAVGALLVYDVTRHA 568
           V+KAQ+WDTAGQ                     ERYRAITSAYYRGAVGALLVYDVTRH+
Sbjct: 61  VIKAQIWDTAGQ---------------------ERYRAITSAYYRGAVGALLVYDVTRHS 99

Query: 567 TFENTERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKTFAETESLYFMETSALD 388
           TFEN ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGK+FAE ESLYFMETSAL+
Sbjct: 100 TFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE 159

Query: 387 ATNVENAFAEVLTQIYHIVSRRTVETGDDGAASNVPSKGEKIHVKDDVSALKRIGCCSN 211
           ATNV+NAFAEVLTQIY IVS++ +E GDDGAAS VPSKGEKI V  DVSA+KR+GCCSN
Sbjct: 160 ATNVDNAFAEVLTQIYRIVSKKAMEAGDDGAASAVPSKGEKIDVGKDVSAMKRVGCCSN 218


>ref|XP_002522248.1| protein with unknown function [Ricinus communis]
           gi|223538501|gb|EEF40106.1| protein with unknown
           function [Ricinus communis]
          Length = 218

 Score =  375 bits (963), Expect = e-102
 Identities = 190/239 (79%), Positives = 208/239 (87%)
 Frame = -1

Query: 927 MAGYKADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFANRSLTVDGK 748
           MAGY+A++DYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFA RSL VDGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 747 VVKAQVWDTAGQXXXXXXXXXXXXXXXXDTAGQERYRAITSAYYRGAVGALLVYDVTRHA 568
           V+KAQ+WDTAGQ                     ERYRAITSAYYRGAVGALLVYDVTRH+
Sbjct: 61  VIKAQIWDTAGQ---------------------ERYRAITSAYYRGAVGALLVYDVTRHS 99

Query: 567 TFENTERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKTFAETESLYFMETSALD 388
           TFEN ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGK+FAE ESLYFMETSAL+
Sbjct: 100 TFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE 159

Query: 387 ATNVENAFAEVLTQIYHIVSRRTVETGDDGAASNVPSKGEKIHVKDDVSALKRIGCCSN 211
           ATNV+NAFAEVLTQIY IVS++ +ETGD+GAAS VPSKGEKI V  DVSA+KR+GCCS+
Sbjct: 160 ATNVDNAFAEVLTQIYRIVSKKAMETGDEGAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218


>ref|XP_002317396.1| predicted protein [Populus trichocarpa] gi|222860461|gb|EEE98008.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  371 bits (952), Expect = e-100
 Identities = 188/239 (78%), Positives = 207/239 (86%)
 Frame = -1

Query: 927 MAGYKADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFANRSLTVDGK 748
           MAGY+A++DYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFA RSL VDGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 747 VVKAQVWDTAGQXXXXXXXXXXXXXXXXDTAGQERYRAITSAYYRGAVGALLVYDVTRHA 568
           V+KAQ+WDTAGQ                     ERYRAITSAYYRGAVGALLVYDVTRH+
Sbjct: 61  VIKAQIWDTAGQ---------------------ERYRAITSAYYRGAVGALLVYDVTRHS 99

Query: 567 TFENTERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKTFAETESLYFMETSALD 388
           TFEN ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGK+FAE ESLYFMETSAL+
Sbjct: 100 TFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE 159

Query: 387 ATNVENAFAEVLTQIYHIVSRRTVETGDDGAASNVPSKGEKIHVKDDVSALKRIGCCSN 211
           ATNV++AFAEVLTQIY IVS++ +ETGD+ AAS VPSKGEKI V  DVSA+KR+GCCS+
Sbjct: 160 ATNVDSAFAEVLTQIYRIVSKKAMETGDEAAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218


>ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
           gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related
           protein RABA1c-like [Cucumis sativus]
          Length = 218

 Score =  368 bits (945), Expect = e-99
 Identities = 187/239 (78%), Positives = 205/239 (85%)
 Frame = -1

Query: 927 MAGYKADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFANRSLTVDGK 748
           MAGY+A++DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFA RSL VDGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 747 VVKAQVWDTAGQXXXXXXXXXXXXXXXXDTAGQERYRAITSAYYRGAVGALLVYDVTRHA 568
           VVKAQ+WDTAGQ                     ERYRAITSAYYRGAVGALLVYDVTRH+
Sbjct: 61  VVKAQIWDTAGQ---------------------ERYRAITSAYYRGAVGALLVYDVTRHS 99

Query: 567 TFENTERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKTFAETESLYFMETSALD 388
           TFEN ERWL+ELRDHTDPNIVVML+GNKSDLRHLVAVSTEDGK+FAE ESLYFMETSAL+
Sbjct: 100 TFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALE 159

Query: 387 ATNVENAFAEVLTQIYHIVSRRTVETGDDGAASNVPSKGEKIHVKDDVSALKRIGCCSN 211
           ATNVEN+FAEVLTQIYHIVS++ +E GD  AA++VP KGEKI V  DVSA+K+ GCCS+
Sbjct: 160 ATNVENSFAEVLTQIYHIVSKKAMEAGDGTAAASVPPKGEKIDVSKDVSAVKKAGCCSS 218


Top