BLASTX nr result

ID: Coptis25_contig00013239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013239
         (2138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19106.3| unnamed protein product [Vitis vinifera]              504   e-140
ref|XP_002284289.1| PREDICTED: alkylated DNA repair protein alkB...   501   e-139
ref|XP_002513858.1| S-adenosylmethionine-dependent methyltransfe...   487   e-135
ref|XP_002302272.1| predicted protein [Populus trichocarpa] gi|2...   468   e-129
ref|XP_003522817.1| PREDICTED: alkylated DNA repair protein alkB...   463   e-128

>emb|CBI19106.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  504 bits (1298), Expect = e-140
 Identities = 249/352 (70%), Positives = 291/352 (82%), Gaps = 2/352 (0%)
 Frame = -2

Query: 1897 QKKGCITMAEAASILPPCVSERLSLSMKVTTDQKC-YSSVQSTPEIEKKYVHHVYDAIAP 1721
            +++G + MA +   L          S+ V+ DQ C  S+VQSTPEIEKKYVHHVYDAIAP
Sbjct: 38   RREGKVDMASSLCTLVSDGESHTQPSLIVSQDQICPVSNVQSTPEIEKKYVHHVYDAIAP 97

Query: 1720 HFSSTRFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAG 1541
            HFSSTRFAKWPKV+TFL SLP GSLVLDAGCGNGKYLGL+PDCF++GCDIS  LINICA 
Sbjct: 98   HFSSTRFAKWPKVATFLKSLPSGSLVLDAGCGNGKYLGLSPDCFFIGCDISAPLINICAD 157

Query: 1540 RGHEVLVADAVILPYRTAFGDAAISIAVLHHLSTESRRRKAIQELIRVVRKGGLVLITVW 1361
            R HEV+VADAV LPYRT FGDAAISIAVLHHLSTESRR+KAIQEL+RVV+KGGLVLITVW
Sbjct: 158  RDHEVVVADAVNLPYRTGFGDAAISIAVLHHLSTESRRKKAIQELVRVVKKGGLVLITVW 217

Query: 1360 AVEQEDSALVTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLQSIPETEDNCSGNRLKVIAE 1184
            AVEQED +LVTKWTPL+ K +EEW+GP SPR+RSPS+ TL+SIPETE+N SG  LK + E
Sbjct: 218  AVEQEDRSLVTKWTPLSPKYVEEWIGPSSPRIRSPSSFTLESIPETEENGSGEHLKDLKE 277

Query: 1183 QSEDKMEMDAHATSEIGSTSEGWGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALANGL 1004
             S + ++   H+T +    S  +  +    + QEYFVPWHLPYHRAE++G SACALANGL
Sbjct: 278  ISNENLQDTMHSTCQTEDDSMTFKIKKNIESHQEYFVPWHLPYHRAEVSGASACALANGL 337

Query: 1003 AKKDEKKGAVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 848
            AKKD+KKGAVVYNRYYHVF EGELERLVSG++NAVI+D+F+DKSNWCIIL+K
Sbjct: 338  AKKDDKKGAVVYNRYYHVFSEGELERLVSGMDNAVIVDQFFDKSNWCIILEK 389


>ref|XP_002284289.1| PREDICTED: alkylated DNA repair protein alkB homolog 8 [Vitis
            vinifera]
          Length = 347

 Score =  501 bits (1291), Expect = e-139
 Identities = 245/327 (74%), Positives = 282/327 (86%), Gaps = 2/327 (0%)
 Frame = -2

Query: 1822 SMKVTTDQKC-YSSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVSTFLNSLPEGSL 1646
            S+ V+ DQ C  S+VQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKV+TFL SLP GSL
Sbjct: 19   SLIVSQDQICPVSNVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVATFLKSLPSGSL 78

Query: 1645 VLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEVLVADAVILPYRTAFGDAAIS 1466
            VLDAGCGNGKYLGL+PDCF++GCDIS  LINICA R HEV+VADAV LPYRT FGDAAIS
Sbjct: 79   VLDAGCGNGKYLGLSPDCFFIGCDISAPLINICADRDHEVVVADAVNLPYRTGFGDAAIS 138

Query: 1465 IAVLHHLSTESRRRKAIQELIRVVRKGGLVLITVWAVEQEDSALVTKWTPLTHK-LEEWV 1289
            IAVLHHLSTESRR+KAIQEL+RVV+KGGLVLITVWAVEQED +LVTKWTPL+ K +EEW+
Sbjct: 139  IAVLHHLSTESRRKKAIQELVRVVKKGGLVLITVWAVEQEDRSLVTKWTPLSPKYVEEWI 198

Query: 1288 GPGSPRVRSPSTLTLQSIPETEDNCSGNRLKVIAEQSEDKMEMDAHATSEIGSTSEGWGT 1109
            GP SPR+RSPS+ TL+SIPETE+N SG  LK + E S + ++   H+T +    S  +  
Sbjct: 199  GPSSPRIRSPSSFTLESIPETEENGSGEHLKDLKEISNENLQDTMHSTCQTEDDSMTFKI 258

Query: 1108 RSIKGNQQEYFVPWHLPYHRAEITGHSACALANGLAKKDEKKGAVVYNRYYHVFMEGELE 929
            +    + QEYFVPWHLPYHRAE++G SACALANGLAKKD+KKGAVVYNRYYHVF EGELE
Sbjct: 259  KKNIESHQEYFVPWHLPYHRAEVSGASACALANGLAKKDDKKGAVVYNRYYHVFSEGELE 318

Query: 928  RLVSGIENAVILDKFYDKSNWCIILKK 848
            RLVSG++NAVI+D+F+DKSNWCIIL+K
Sbjct: 319  RLVSGMDNAVIVDQFFDKSNWCIILEK 345


>ref|XP_002513858.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus
            communis] gi|223546944|gb|EEF48441.1|
            S-adenosylmethionine-dependent methyltransferase,
            putative [Ricinus communis]
          Length = 390

 Score =  487 bits (1253), Expect = e-135
 Identities = 236/331 (71%), Positives = 280/331 (84%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1834 RLSLSMKVTTDQKCYSS-VQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVSTFLNSLP 1658
            ++ LS+     Q C SS VQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKV+TFLNSLP
Sbjct: 59   QIQLSLSADEKQVCSSSSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVATFLNSLP 118

Query: 1657 EGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINICAGRGHEVLVADAVILPYRTAFGD 1478
             GSL+LDAGCGNGKYLGLNPDC+++GCDIS  LI ICA RGHEVLV DAV LPYRT F D
Sbjct: 119  SGSLILDAGCGNGKYLGLNPDCYFIGCDISAPLIKICADRGHEVLVGDAVNLPYRTGFSD 178

Query: 1477 AAISIAVLHHLSTESRRRKAIQELIRVVRKGGLVLITVWAVEQEDSALVTKWTPLTHK-L 1301
            AAISIAVLHHLSTE+RR+KAI+EL+RVV+KGGLVLITVWAVEQED +LV KWTPL+ K +
Sbjct: 179  AAISIAVLHHLSTENRRKKAIEELVRVVKKGGLVLITVWAVEQEDGSLVAKWTPLSQKYV 238

Query: 1300 EEWVGPGSPRVRSPSTLTLQSIPETEDNCSGNRLKVIAEQSEDKMEMDAHATSEIGSTSE 1121
            EEW+GPGSPRVRSPS+ TL+SIPETE+N S   ++   + ++++      + S+    S 
Sbjct: 239  EEWIGPGSPRVRSPSSFTLESIPETEENNSKELIQDSEKNADEEFMKTMDSISQTEHNSV 298

Query: 1120 GWGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALANGLAKKDEKKGAVVYNRYYHVFME 941
                ++ K NQQEYFVPWHLPYHRAE++G SACALA+GLAKKD+KKGAVVYNRYYHVF E
Sbjct: 299  FKDEKNAK-NQQEYFVPWHLPYHRAEVSGASACALASGLAKKDDKKGAVVYNRYYHVFSE 357

Query: 940  GELERLVSGIENAVILDKFYDKSNWCIILKK 848
            GELERLV+G++NAV++D+F+DKSNWC+IL+K
Sbjct: 358  GELERLVTGMKNAVVVDRFFDKSNWCVILEK 388


>ref|XP_002302272.1| predicted protein [Populus trichocarpa] gi|222843998|gb|EEE81545.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  468 bits (1205), Expect = e-129
 Identities = 236/336 (70%), Positives = 268/336 (79%), Gaps = 22/336 (6%)
 Frame = -2

Query: 1789 SSVQSTPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYL 1610
            SSVQSTPEIEK YVH VYDAIAPHFSSTRFAKWPKV+TFLNSLP GSLVLDAGCGNGKYL
Sbjct: 37   SSVQSTPEIEKNYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSGSLVLDAGCGNGKYL 96

Query: 1609 GLNPDCFYVGCDISPSLINICAGRGHEVLVADAVILPYRTAFGDAAISIAVLHHLSTESR 1430
            G NPDC +VGCDIS  LI ICA RGHEVLVADAV LPYRT FGDAAISIAVLHHLSTE+R
Sbjct: 97   GFNPDCTFVGCDISGPLIKICADRGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTENR 156

Query: 1429 RRKAIQELIRVVRKGGLVLITVWAVEQEDSALVTKWTPLTHK-LEEWVGPGSPRVRSPST 1253
            R++AI EL+R V+KGGL+LITVWAVEQED +LVTKWTPL  K ++EW+GPGSPR+RSPS+
Sbjct: 157  RKRAIDELVRAVKKGGLILITVWAVEQEDRSLVTKWTPLNQKYVDEWIGPGSPRIRSPSS 216

Query: 1252 LTLQSIPETEDNCSGNR--------------LKVIAEQSEDKMEMDAHATS-------EI 1136
            +TL+SIPETE+N   +               L+ I E   +  E +    S        +
Sbjct: 217  ITLESIPETENNSKEHEKDTESLNHNPSPITLESIPETENNSKEHEKDTESLNHEFKGTM 276

Query: 1135 GSTSEGWGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALANGLAKKDEKKGAVVYNRYY 956
             STS+     S   NQQEYFVPWHLPYHRAE++G SACAL NGLAKKD+KKGAVVYNRYY
Sbjct: 277  PSTSK---DDSSVQNQQEYFVPWHLPYHRAEVSGASACALENGLAKKDDKKGAVVYNRYY 333

Query: 955  HVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 848
            HVF EGELERLVSG+ NAV++D+F+DKSNWCIIL+K
Sbjct: 334  HVFSEGELERLVSGMNNAVVVDRFFDKSNWCIILQK 369


>ref|XP_003522817.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Glycine
            max]
          Length = 374

 Score =  463 bits (1192), Expect = e-128
 Identities = 236/355 (66%), Positives = 281/355 (79%), Gaps = 4/355 (1%)
 Frame = -2

Query: 1900 LQKKGCITMAEAASILP---PCVSERLSLSMKVTTDQKCYSSVQSTPEIEKKYVHHVYDA 1730
            +++  C   + + ++ P   PC+++ LS+S   TT     +SV+STPEIEKKYVHHVYDA
Sbjct: 37   MKEINCKVDSSSCTLAPNREPCITDSLSVSGNCTTSS---TSVKSTPEIEKKYVHHVYDA 93

Query: 1729 IAPHFSSTRFAKWPKVSTFLNSLPEGSLVLDAGCGNGKYLGLNPDCFYVGCDISPSLINI 1550
            IAPHFS+TRFAKWPKV+ FL+SLP GSLV DAGCGNGKYLGLN DCF++GCDISPSLI I
Sbjct: 94   IAPHFSATRFAKWPKVAAFLSSLPLGSLVFDAGCGNGKYLGLNQDCFFIGCDISPSLIKI 153

Query: 1549 CAGRGHEVLVADAVILPYRTAFGDAAISIAVLHHLSTESRRRKAIQELIRVVRKGGLVLI 1370
            C  R HEVLVADAV LPYRT FGD AISIAVLHHLSTE+RRRKAI+EL+RVV+KGGLVLI
Sbjct: 154  CLDREHEVLVADAVNLPYRTGFGDVAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLI 213

Query: 1369 TVWAVEQEDSALVTKWTPLTHK-LEEWVGPGSPRVRSPSTLTLQSIPETEDNCSGNRLKV 1193
            TVWAVEQEDS L+TKWTPL  K ++EWVGPGSPR R+PS+ +L+SIPE+E + SG  ++V
Sbjct: 214  TVWAVEQEDSKLITKWTPLNEKYVDEWVGPGSPRTRAPSSSSLESIPESEVSRSGEHMEV 273

Query: 1192 IAEQSEDKMEMDAHATSEIGSTSEGWGTRSIKGNQQEYFVPWHLPYHRAEITGHSACALA 1013
              E          H + ++         ++IK NQQEYFVPWHLPYHRAEI+G SA ALA
Sbjct: 274  CNE---------PHVSRDLEE------EKNIK-NQQEYFVPWHLPYHRAEISGASAEALA 317

Query: 1012 NGLAKKDEKKGAVVYNRYYHVFMEGELERLVSGIENAVILDKFYDKSNWCIILKK 848
             GLA KD+KKGAVVYNRYYHVF EGELE L +GI NA I+D+F+DKSNWCIIL+K
Sbjct: 318  AGLATKDDKKGAVVYNRYYHVFSEGELESLTTGINNARIVDQFFDKSNWCIILEK 372


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