BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013238
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630716.1| U3 small nucleolar ribonucleoprotein IMP3 [M...   108   6e-22
ref|XP_003630715.1| U3 small nucleolar ribonucleoprotein IMP3 [M...   108   6e-22
ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [M...   108   6e-22
ref|XP_003580748.1| PREDICTED: U3 small nucleolar ribonucleoprot...   107   1e-21
ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   105   3e-21

>ref|XP_003630716.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|355524738|gb|AET05192.1| U3 small nucleolar
           ribonucleoprotein IMP3 [Medicago truncatula]
          Length = 173

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/77 (68%), Positives = 59/77 (76%)
 Frame = -2

Query: 334 RRRLSTVMVRKKYVEQLKAAVTYIEQGHIMVGTNTITDPAYLVTRNAEDSIKWEPSSKIN 155
           RRRLSTV+V+ K+ E LK AVTYIEQGH+ VG NTITDPAYLVTRN ED I W  SSKI 
Sbjct: 97  RRRLSTVLVKLKFAEHLKEAVTYIEQGHVRVGPNTITDPAYLVTRNMEDLITWVDSSKIK 156

Query: 154 KAVQVYHGKYDDYDAMN 104
           + V  Y+ K DDYD MN
Sbjct: 157 RKVLQYNDKLDDYDLMN 173


>ref|XP_003630715.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|355524737|gb|AET05191.1| U3 small nucleolar
           ribonucleoprotein IMP3 [Medicago truncatula]
          Length = 153

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/77 (68%), Positives = 59/77 (76%)
 Frame = -2

Query: 334 RRRLSTVMVRKKYVEQLKAAVTYIEQGHIMVGTNTITDPAYLVTRNAEDSIKWEPSSKIN 155
           RRRLSTV+V+ K+ E LK AVTYIEQGH+ VG NTITDPAYLVTRN ED I W  SSKI 
Sbjct: 77  RRRLSTVLVKLKFAEHLKEAVTYIEQGHVRVGPNTITDPAYLVTRNMEDLITWVDSSKIK 136

Query: 154 KAVQVYHGKYDDYDAMN 104
           + V  Y+ K DDYD MN
Sbjct: 137 RKVLQYNDKLDDYDLMN 153


>ref|XP_003630714.1| U3 small nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|217075252|gb|ACJ85986.1| unknown [Medicago
           truncatula] gi|355524736|gb|AET05190.1| U3 small
           nucleolar ribonucleoprotein IMP3 [Medicago truncatula]
           gi|388502894|gb|AFK39513.1| unknown [Medicago
           truncatula]
          Length = 182

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/77 (68%), Positives = 59/77 (76%)
 Frame = -2

Query: 334 RRRLSTVMVRKKYVEQLKAAVTYIEQGHIMVGTNTITDPAYLVTRNAEDSIKWEPSSKIN 155
           RRRLSTV+V+ K+ E LK AVTYIEQGH+ VG NTITDPAYLVTRN ED I W  SSKI 
Sbjct: 106 RRRLSTVLVKLKFAEHLKEAVTYIEQGHVRVGPNTITDPAYLVTRNMEDLITWVDSSKIK 165

Query: 154 KAVQVYHGKYDDYDAMN 104
           + V  Y+ K DDYD MN
Sbjct: 166 RKVLQYNDKLDDYDLMN 182


>ref|XP_003580748.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3-like
           [Brachypodium distachyon]
          Length = 182

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/76 (67%), Positives = 59/76 (77%)
 Frame = -2

Query: 334 RRRLSTVMVRKKYVEQLKAAVTYIEQGHIMVGTNTITDPAYLVTRNAEDSIKWEPSSKIN 155
           RRRL+TVMV+ K+ E LK AVTYIEQGH+ VG  T+TDPA+LVTRN ED I W  SSKI 
Sbjct: 106 RRRLATVMVKLKFAEHLKEAVTYIEQGHVRVGPETVTDPAFLVTRNMEDFITWVDSSKIK 165

Query: 154 KAVQVYHGKYDDYDAM 107
           K V  Y+G+ DDYDAM
Sbjct: 166 KKVMAYNGQLDDYDAM 181


>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = -2

Query: 334 RRRLSTVMVRKKYVEQLKAAVTYIEQGHIMVGTNTITDPAYLVTRNAEDSIKWEPSSKIN 155
           RRRLSTV+VR K+ E LK AVTYIEQGHI VG +T+TDPA+LVTRN ED + W  SSKI 
Sbjct: 106 RRRLSTVLVRLKFAEHLKEAVTYIEQGHIRVGPDTVTDPAFLVTRNLEDFVTWVDSSKIK 165

Query: 154 KAVQVYHGKYDDYDAMN 104
           + V  Y+ + DDYDAMN
Sbjct: 166 RKVLQYNERLDDYDAMN 182