BLASTX nr result

ID: Coptis25_contig00013231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013231
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869966.1| AK-HSDH/AK-HSDH II [Arabidopsis lyrata subsp...   165   3e-39
ref|NP_974576.1| bifunctional aspartokinase/homoserine dehydroge...   165   3e-39
ref|XP_003577947.1| PREDICTED: bifunctional aspartokinase/homose...   162   3e-38
ref|XP_004156204.1| PREDICTED: bifunctional aspartokinase/homose...   160   8e-38
ref|XP_004141538.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional...   160   8e-38

>ref|XP_002869966.1| AK-HSDH/AK-HSDH II [Arabidopsis lyrata subsp. lyrata]
            gi|297315802|gb|EFH46225.1| AK-HSDH/AK-HSDH II
            [Arabidopsis lyrata subsp. lyrata]
          Length = 921

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/106 (76%), Positives = 95/106 (89%)
 Frame = -2

Query: 319  SSAEEFMQQLP*FDQDMARERHDAETVGEVLRYVGVVDAVNNKGSVELRRYKKDHPFARL 140
            +SAEEFM++LP +D D+A+ER +AE  GEVLRYVGVVDAVN KG+VELRRYKK+HPFA+L
Sbjct: 812  TSAEEFMEKLPQYDGDLAKERLEAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQL 871

Query: 139  SGYDNIISFTATRYKDHSLIIIGLGAGAQVTAGGVFSDILRLASYL 2
            +G DNII+FT TRYKDH LI+ G GAGAQVTAGG+FSDILRLASYL
Sbjct: 872  AGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDILRLASYL 917


>ref|NP_974576.1| bifunctional aspartokinase/homoserine dehydrogenase 1 [Arabidopsis
            thaliana] gi|75100442|sp|O81852.1|AKH2_ARATH RecName:
            Full=Bifunctional aspartokinase/homoserine dehydrogenase
            2, chloroplastic; Short=AK-HD 2; Short=AK-HSDH 2;
            AltName: Full=Beta-aspartyl phosphate homoserine 2;
            Includes: RecName: Full=Aspartokinase; Includes: RecName:
            Full=Homoserine dehydrogenase; Flags: Precursor
            gi|3250680|emb|CAA19688.1| aspartate kinase-homoserine
            dehydrogenase-like protein [Arabidopsis thaliana]
            gi|7268767|emb|CAB78973.1| aspartate kinase-homoserine
            dehydrogenase-like protein [Arabidopsis thaliana]
            gi|110736464|dbj|BAF00200.1| aspartate kinase-homoserine
            dehydrogenase - like protein [Arabidopsis thaliana]
            gi|332658820|gb|AEE84220.1| bifunctional
            aspartokinase/homoserine dehydrogenase 1 [Arabidopsis
            thaliana]
          Length = 916

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/106 (76%), Positives = 94/106 (88%)
 Frame = -2

Query: 319  SSAEEFMQQLP*FDQDMARERHDAETVGEVLRYVGVVDAVNNKGSVELRRYKKDHPFARL 140
            +S EEFM++LP +D D+A+ER DAE  GEVLRYVGVVDAVN KG+VELRRYKK+HPFA+L
Sbjct: 807  TSVEEFMEKLPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQL 866

Query: 139  SGYDNIISFTATRYKDHSLIIIGLGAGAQVTAGGVFSDILRLASYL 2
            +G DNII+FT TRYKDH LI+ G GAGAQVTAGG+FSDILRLASYL
Sbjct: 867  AGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDILRLASYL 912


>ref|XP_003577947.1| PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 2,
            chloroplastic-like [Brachypodium distachyon]
          Length = 918

 Score =  162 bits (409), Expect = 3e-38
 Identities = 79/106 (74%), Positives = 92/106 (86%)
 Frame = -2

Query: 319  SSAEEFMQQLP*FDQDMARERHDAETVGEVLRYVGVVDAVNNKGSVELRRYKKDHPFARL 140
            SSA+EFMQ+LP FDQD AR+RH+AE  GEVLRYVGVVD +N KG VEL+RYKKDHPFA+L
Sbjct: 809  SSADEFMQKLPSFDQDWARQRHEAEAAGEVLRYVGVVDVLNKKGRVELQRYKKDHPFAQL 868

Query: 139  SGYDNIISFTATRYKDHSLIIIGLGAGAQVTAGGVFSDILRLASYL 2
            SG DNII+FT +RYK+  L++ G GAGA+VTAGGVF DILRLASYL
Sbjct: 869  SGSDNIIAFTTSRYKEQPLMVRGPGAGAEVTAGGVFCDILRLASYL 914


>ref|XP_004156204.1| PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase,
            chloroplastic-like [Cucumis sativus]
          Length = 918

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/107 (74%), Positives = 90/107 (84%)
 Frame = -2

Query: 322  SSSAEEFMQQLP*FDQDMARERHDAETVGEVLRYVGVVDAVNNKGSVELRRYKKDHPFAR 143
            S+SAEEFMQQLP FD DM R+R +AE  GEVLRYVGVVD VN KG VE++RYK DHPFA+
Sbjct: 808  SASAEEFMQQLPQFDADMTRKRQEAENAGEVLRYVGVVDVVNQKGFVEMQRYKDDHPFAQ 867

Query: 142  LSGYDNIISFTATRYKDHSLIIIGLGAGAQVTAGGVFSDILRLASYL 2
            LSG DNII+FT TRY+   LI+ G GAGAQVTAGG+FSDILRLASYL
Sbjct: 868  LSGSDNIIAFTTTRYRKQPLIVRGPGAGAQVTAGGIFSDILRLASYL 914


>ref|XP_004141538.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional aspartokinase/homoserine
            dehydrogenase, chloroplastic-like [Cucumis sativus]
          Length = 919

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/107 (74%), Positives = 90/107 (84%)
 Frame = -2

Query: 322  SSSAEEFMQQLP*FDQDMARERHDAETVGEVLRYVGVVDAVNNKGSVELRRYKKDHPFAR 143
            S+SAEEFMQQLP FD DM R+R +AE  GEVLRYVGVVD VN KG VE++RYK DHPFA+
Sbjct: 809  SASAEEFMQQLPQFDADMTRKRQEAENAGEVLRYVGVVDVVNQKGFVEMQRYKDDHPFAQ 868

Query: 142  LSGYDNIISFTATRYKDHSLIIIGLGAGAQVTAGGVFSDILRLASYL 2
            LSG DNII+FT TRY+   LI+ G GAGAQVTAGG+FSDILRLASYL
Sbjct: 869  LSGSDNIIAFTTTRYRKQPLIVRGPGAGAQVTAGGIFSDILRLASYL 915


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