BLASTX nr result

ID: Coptis25_contig00013230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013230
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446981.1| hypothetical protein SORBIDRAFT_06g026230 [S...   139   2e-31
ref|NP_001053645.1| Os04g0579700 [Oryza sativa Japonica Group] g...   139   2e-31
dbj|BAJ96039.1| predicted protein [Hordeum vulgare subsp. vulgare]    135   3e-30
emb|CBI34370.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002279382.1| PREDICTED: BTB/POZ domain-containing protein...   134   8e-30

>ref|XP_002446981.1| hypothetical protein SORBIDRAFT_06g026230 [Sorghum bicolor]
           gi|241938164|gb|EES11309.1| hypothetical protein
           SORBIDRAFT_06g026230 [Sorghum bicolor]
          Length = 552

 Score =  139 bits (351), Expect = 2e-31
 Identities = 80/156 (51%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
 Frame = -1

Query: 456 SYPSSYTDFNXXXXXXXXXXXXXXXXXXXLDKARS-PTLFEMMSKEVDCHPKSQMPTYXX 280
           SYPSSYT FN                    DK RS PTLF+MM+ E D HP+S       
Sbjct: 26  SYPSSYTKFNSALNAGLLNPMSPPPLPL--DKTRSSPTLFDMMANEQDYHPRSAAAA--A 81

Query: 279 XXNHIPIMNGKPPH---PISVQDKQVLLQQRLAEMVGNISPGNQFNDPVSSDVKLTLSSN 109
             + IP    +P H   P+   D+Q+LLQ R+A+++G+ SPGNQFND  SSDV+LTLSS 
Sbjct: 82  GVHSIPAPPHQPHHQLQPVRSMDRQMLLQDRIADLIGSCSPGNQFNDADSSDVRLTLSSK 141

Query: 108 DGLSVSMNVHRQILVAHSRYFAAELTDSWSKQRRSL 1
           DGLSV++ VHR ILVAHSR+FAA+L+D WSKQ+R+L
Sbjct: 142 DGLSVTLCVHRHILVAHSRFFAAKLSDRWSKQQRTL 177


>ref|NP_001053645.1| Os04g0579700 [Oryza sativa Japonica Group]
           gi|32488518|emb|CAE03270.1| OSJNBa0011J08.25 [Oryza
           sativa Japonica Group] gi|38345861|emb|CAD41158.2|
           OSJNBa0064M23.3 [Oryza sativa Japonica Group]
           gi|113565216|dbj|BAF15559.1| Os04g0579700 [Oryza sativa
           Japonica Group] gi|125549446|gb|EAY95268.1| hypothetical
           protein OsI_17091 [Oryza sativa Indica Group]
           gi|125591386|gb|EAZ31736.1| hypothetical protein
           OsJ_15888 [Oryza sativa Japonica Group]
          Length = 533

 Score =  139 bits (350), Expect = 2e-31
 Identities = 78/153 (50%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
 Frame = -1

Query: 456 SYPSSYTDFNXXXXXXXXXXXXXXXXXXXLDKARS-PTLFEMMSKEVDCHPKSQMPTYXX 280
           SYPSSYT FN                    DK RS PTLF+MM+ E D HP++    +  
Sbjct: 10  SYPSSYTKFNSALNAGLLNPMSPPPLPL--DKTRSSPTLFDMMANEQDYHPRTAAAIHSI 67

Query: 279 XXNHIPIMNGKPPHPISVQDKQVLLQQRLAEMVGNISPGNQFNDPVSSDVKLTLSSNDGL 100
                P     P  P    D+QVLLQ R+AE++G+ SPGNQFND  SSDV+LTL+S DGL
Sbjct: 68  PA---PPQQAHPLQPARSMDRQVLLQDRVAELIGSCSPGNQFNDADSSDVRLTLTSKDGL 124

Query: 99  SVSMNVHRQILVAHSRYFAAELTDSWSKQRRSL 1
           SV++ VHR ILVAHSR+FAA+L+D WSKQ+R+L
Sbjct: 125 SVTLCVHRHILVAHSRFFAAKLSDRWSKQQRTL 157


>dbj|BAJ96039.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 553

 Score =  135 bits (340), Expect = 3e-30
 Identities = 77/153 (50%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
 Frame = -1

Query: 456 SYPSSYTDFNXXXXXXXXXXXXXXXXXXXLDKARS-PTLFEMMSKEVDCHPKSQMPTYXX 280
           SYPSSYT FN                    DK RS PTLF+MM+ E D  P+S    +  
Sbjct: 29  SYPSSYTKFNSALNAGLLNPMSPPPLPI--DKTRSSPTLFDMMANEQDYQPRSAAAAHSA 86

Query: 279 XXNHIPIMNGKPPHPISVQDKQVLLQQRLAEMVGNISPGNQFNDPVSSDVKLTLSSNDGL 100
             +  P  +  P  P    D+Q LLQ R+AE++G+ SPGNQFND  SSDV+LTLSS DGL
Sbjct: 87  PPH--PHQHHNPLAPARSMDRQALLQDRVAELIGSCSPGNQFNDADSSDVRLTLSSKDGL 144

Query: 99  SVSMNVHRQILVAHSRYFAAELTDSWSKQRRSL 1
           S+++ VHR ILVAHSR+FAA+L+D WSKQ+R+L
Sbjct: 145 SLTLCVHRHILVAHSRFFAAKLSDRWSKQQRTL 177


>emb|CBI34370.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  134 bits (337), Expect = 8e-30
 Identities = 71/150 (47%), Positives = 97/150 (64%)
 Frame = -1

Query: 456 SYPSSYTDFNXXXXXXXXXXXXXXXXXXXLDKARSPTLFEMMSKEVDCHPKSQMPTYXXX 277
           S+PSS++ FN                        SPTLFEMM+ E +C P+ Q+      
Sbjct: 19  SFPSSFSKFNSALTAGLLNPMSPPPPPPSEKTRSSPTLFEMMASEPECQPRPQIAPSMG- 77

Query: 276 XNHIPIMNGKPPHPISVQDKQVLLQQRLAEMVGNISPGNQFNDPVSSDVKLTLSSNDGLS 97
               P+   +PP  ISVQDK  L+ QR++E++ + SPGNQFND  SSD+KLTLSS DG+S
Sbjct: 78  ----PVSVLRPP--ISVQDKSALMMQRISEILASRSPGNQFNDMSSSDIKLTLSSKDGVS 131

Query: 96  VSMNVHRQILVAHSRYFAAELTDSWSKQRR 7
           +SM+VHRQILVAHSR+FAA+L+D W++Q++
Sbjct: 132 ISMSVHRQILVAHSRFFAAKLSDRWTRQQQ 161


>ref|XP_002279382.1| PREDICTED: BTB/POZ domain-containing protein At1g63850 [Vitis
           vinifera]
          Length = 522

 Score =  134 bits (337), Expect = 8e-30
 Identities = 71/150 (47%), Positives = 97/150 (64%)
 Frame = -1

Query: 456 SYPSSYTDFNXXXXXXXXXXXXXXXXXXXLDKARSPTLFEMMSKEVDCHPKSQMPTYXXX 277
           S+PSS++ FN                        SPTLFEMM+ E +C P+ Q+      
Sbjct: 19  SFPSSFSKFNSALTAGLLNPMSPPPPPPSEKTRSSPTLFEMMASEPECQPRPQIAPSMG- 77

Query: 276 XNHIPIMNGKPPHPISVQDKQVLLQQRLAEMVGNISPGNQFNDPVSSDVKLTLSSNDGLS 97
               P+   +PP  ISVQDK  L+ QR++E++ + SPGNQFND  SSD+KLTLSS DG+S
Sbjct: 78  ----PVSVLRPP--ISVQDKSALMMQRISEILASRSPGNQFNDMSSSDIKLTLSSKDGVS 131

Query: 96  VSMNVHRQILVAHSRYFAAELTDSWSKQRR 7
           +SM+VHRQILVAHSR+FAA+L+D W++Q++
Sbjct: 132 ISMSVHRQILVAHSRFFAAKLSDRWTRQQQ 161


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