BLASTX nr result

ID: Coptis25_contig00013228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013228
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279009.1| PREDICTED: uncharacterized protein LOC100266...   375   e-101
ref|XP_002516000.1| nucleic acid binding protein, putative [Rici...   369   e-100
ref|XP_002298232.1| predicted protein [Populus trichocarpa] gi|2...   366   8e-99
gb|AFK33576.1| unknown [Lotus japonicus]                              364   2e-98
ref|XP_003546951.1| PREDICTED: uncharacterized protein LOC100785...   363   5e-98

>ref|XP_002279009.1| PREDICTED: uncharacterized protein LOC100266864 [Vitis vinifera]
          Length = 476

 Score =  375 bits (963), Expect = e-101
 Identities = 204/322 (63%), Positives = 246/322 (76%)
 Frame = +2

Query: 281  SSSISRQTELKGEGSVFSEDVKVDSAKSVINTGKYSVSVEVAASLIRFVKGKGGSTQRQI 460
            S + SR  + K E     E+        +++  K+S+SVEV ASL+RF+KGKGGSTQ+ I
Sbjct: 93   SVTSSRALQDKDENKAIEEE-------PILSDLKHSISVEVGASLMRFIKGKGGSTQKNI 145

Query: 461  EGETGAKIVFPSSRKENSIVIEGVSSEIVTKASEKVQVIIEEAVKSPNLDYSHFISLPLA 640
            E E G  I+FPSS+KE+SIVIEG S E + +ASEK+QVII+E VKSPNLDYSHFISLPLA
Sbjct: 146  EEEMGVTIIFPSSKKEDSIVIEGDSIEGINRASEKIQVIIDEVVKSPNLDYSHFISLPLA 205

Query: 641  VHPELVDKLISFQNSILGASDSSKAETLCSESDGDTSDEAEDNAQQLDIGRDVAVKLKVV 820
            ++PELVDKL+SFQNSILG  +  K E L SES+ +TSD   D  QQLD   DVAV+LKV 
Sbjct: 206  IYPELVDKLVSFQNSILG--NPCKDENLDSESNEETSD---DEDQQLDRQLDVAVELKVE 260

Query: 821  DENEQVKVDIKKIPIVRYPPKASKSSNLSDLGIDKSIFIKPKTFHLTVLMLKLWNNERIT 1000
            D+++ VKVDI  I +  YPPK SK S  S+LGI+KSIFIKPKTFHLTVLMLKLWN ER+ 
Sbjct: 261  DDSKHVKVDITNISLRSYPPKTSKPSAPSELGIEKSIFIKPKTFHLTVLMLKLWNKERVD 320

Query: 1001 AATEVLQEVASKVVDALEGRPVFVRLKGLECMRGPLAKARVLYTPVEVIGGEDRLLRACQ 1180
            AA +VLQ ++SKV++AL+ RPV +RLKGL+CMRG L+KARVLY PV  IG EDRLL ACQ
Sbjct: 321  AAAKVLQNISSKVMEALDDRPVSIRLKGLDCMRGSLSKARVLYAPVVEIGSEDRLLLACQ 380

Query: 1181 VITDAYVEAGLVFEKDARQKFK 1246
            VI DAYVEAGLV +KD  QK K
Sbjct: 381  VIIDAYVEAGLVLDKDRGQKLK 402


>ref|XP_002516000.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223544905|gb|EEF46420.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 416

 Score =  369 bits (948), Expect = e-100
 Identities = 192/296 (64%), Positives = 240/296 (81%)
 Frame = +2

Query: 359  KSVINTGKYSVSVEVAASLIRFVKGKGGSTQRQIEGETGAKIVFPSSRKENSIVIEGVSS 538
            +S+++  K+S++++V ASLIRF+KGK GSTQ++IE E G K++ PSS+KE + +IEG S 
Sbjct: 49   ESMLSVEKHSLTIQVDASLIRFIKGKRGSTQQKIEEEMGVKVIIPSSKKEETTIIEGSSI 108

Query: 539  EIVTKASEKVQVIIEEAVKSPNLDYSHFISLPLAVHPELVDKLISFQNSILGASDSSKAE 718
            + VT+ASEK+Q II+EAVKSP+LDYSHFISLPLA+HPELVDKL +FQN+ILG +D+S  +
Sbjct: 109  DSVTRASEKIQAIIDEAVKSPSLDYSHFISLPLAIHPELVDKLFNFQNTILGEADASLVQ 168

Query: 719  TLCSESDGDTSDEAEDNAQQLDIGRDVAVKLKVVDENEQVKVDIKKIPIVRYPPKASKSS 898
            T+ S+S+ DTSD+ E+  QQ      VAV+LKV D+   VKVD+  IP+V Y PKASKS 
Sbjct: 169  TMESDSNEDTSDD-ENKDQQSSKENGVAVELKVEDDRH-VKVDLTSIPLVSYAPKASKSP 226

Query: 899  NLSDLGIDKSIFIKPKTFHLTVLMLKLWNNERITAATEVLQEVASKVVDALEGRPVFVRL 1078
             LS LGID+SIFIKPKTFHLTVLMLKLWN ERI AA+EVL+ V+ KV+DAL+ RP+ VRL
Sbjct: 227  TLSGLGIDRSIFIKPKTFHLTVLMLKLWNKERINAASEVLKSVSLKVMDALDNRPLSVRL 286

Query: 1079 KGLECMRGPLAKARVLYTPVEVIGGEDRLLRACQVITDAYVEAGLVFEKDARQKFK 1246
            KGL+CMRG +AKARVLY  VE IG E RLLRACQVI DA+V AGLV EKDA+QK K
Sbjct: 287  KGLDCMRGSMAKARVLYATVEEIGNEGRLLRACQVIIDAFVGAGLVLEKDAKQKLK 342


>ref|XP_002298232.1| predicted protein [Populus trichocarpa] gi|222845490|gb|EEE83037.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  366 bits (939), Expect = 8e-99
 Identities = 193/308 (62%), Positives = 242/308 (78%)
 Frame = +2

Query: 323  SVFSEDVKVDSAKSVINTGKYSVSVEVAASLIRFVKGKGGSTQRQIEGETGAKIVFPSSR 502
            S  S  V  D+ K +++  K+S+ +EV ASLIRF+KGK GSTQ++IE E G KIVFPSS+
Sbjct: 62   STISAGVLNDTVKPMLSAEKHSLMLEVGASLIRFIKGKEGSTQKKIEEEMGVKIVFPSSK 121

Query: 503  KENSIVIEGVSSEIVTKASEKVQVIIEEAVKSPNLDYSHFISLPLAVHPELVDKLISFQN 682
            KE SIVIEG+S++ VT+AS+K+Q I++EA++S +LDYSHFISLPLA++PEL DKL++FQN
Sbjct: 122  KEESIVIEGISTDCVTRASKKIQAIMDEAIES-SLDYSHFISLPLAIYPELTDKLVNFQN 180

Query: 683  SILGASDSSKAETLCSESDGDTSDEAEDNAQQLDIGRDVAVKLKVVDENEQVKVDIKKIP 862
            SILG +D S  E L S+S  DT D  ++  Q+L  GRDVAV+LKV DE + VKVD+  IP
Sbjct: 181  SILGTNDVSADENLESDSIEDTLD-IKNKGQELIKGRDVAVELKVEDE-KHVKVDLTSIP 238

Query: 863  IVRYPPKASKSSNLSDLGIDKSIFIKPKTFHLTVLMLKLWNNERITAATEVLQEVASKVV 1042
             V YPPK  +  N SD GIDKSIFIKP TFHLTVLMLKLWN ER+ AA+ VL+ ++SKV+
Sbjct: 239  FVSYPPKPPRLPNASDFGIDKSIFIKPTTFHLTVLMLKLWNKERVNAASGVLKSISSKVI 298

Query: 1043 DALEGRPVFVRLKGLECMRGPLAKARVLYTPVEVIGGEDRLLRACQVITDAYVEAGLVFE 1222
            DAL+ RP+ +RLKGL+ MRG L+KARVLY PVE IG E RLL ACQVI +A+VEAGLV E
Sbjct: 299  DALDNRPISIRLKGLDTMRGSLSKARVLYAPVEEIGSEGRLLSACQVIINAFVEAGLVLE 358

Query: 1223 KDARQKFK 1246
            KDA+QK K
Sbjct: 359  KDAKQKLK 366


>gb|AFK33576.1| unknown [Lotus japonicus]
          Length = 504

 Score =  364 bits (935), Expect = 2e-98
 Identities = 191/328 (58%), Positives = 240/328 (73%), Gaps = 1/328 (0%)
 Frame = +2

Query: 266  VQCTTSSSISRQTELKGEGSVFSEDVKVDSAKSVINTGKYSVSVEVAASLIRFVKGKGGS 445
            V   TS+++   TE     S   E+++     S ++  K+SVSV+V A L RF+KGKGG 
Sbjct: 103  VGSNTSTTMGETTEPATSSSPLQENIENKMRDSSLSAEKHSVSVKVGAPLFRFIKGKGGY 162

Query: 446  TQRQIEGETGAKIVFPSSRKENSIVIEGVSSEIVTKASEKVQVIIEEAVKSPNLDYSHFI 625
            TQ++IE E   KI+FPSS++E  + +EG+S + V  ASEK+Q II+EAV+S NLDYSHF+
Sbjct: 163  TQKRIEDEMKVKIIFPSSKEEEFVTVEGISIDGVASASEKIQEIIDEAVRSRNLDYSHFV 222

Query: 626  SLPLAVHPELVDKLISFQNSILGASDSSKAETLCSESDGDTSDEAEDNAQQLDI-GRDVA 802
            SLPLA++PELVDKL  FQ+SILG  DS   E L ++S+ D      + A QL     DVA
Sbjct: 223  SLPLAIYPELVDKLFDFQHSILGDGDSCIDENLDTDSNEDEDTTVVEEADQLSKKNADVA 282

Query: 803  VKLKVVDENEQVKVDIKKIPIVRYPPKASKSSNLSDLGIDKSIFIKPKTFHLTVLMLKLW 982
            V+LKV D++E VKV++  I +V Y PKASKSS  SDLGIDKSIFIKPKTFHLTVLMLKLW
Sbjct: 283  VELKVADDSESVKVNLTNISLVSYAPKASKSSAPSDLGIDKSIFIKPKTFHLTVLMLKLW 342

Query: 983  NNERITAATEVLQEVASKVVDALEGRPVFVRLKGLECMRGPLAKARVLYTPVEVIGGEDR 1162
            N +R+  ATE+LQ ++SKV++AL+ RPV +RLKGLECM+G +AKARVLY PVE IG E R
Sbjct: 343  NKDRVKTATEILQNISSKVIEALDNRPVSIRLKGLECMKGSMAKARVLYAPVEEIGCEGR 402

Query: 1163 LLRACQVITDAYVEAGLVFEKDARQKFK 1246
            L RACQVI DAYVEAGLV E DA Q+ K
Sbjct: 403  LFRACQVIIDAYVEAGLVLENDANQRLK 430


>ref|XP_003546951.1| PREDICTED: uncharacterized protein LOC100785531 [Glycine max]
          Length = 510

 Score =  363 bits (932), Expect = 5e-98
 Identities = 225/448 (50%), Positives = 283/448 (63%), Gaps = 46/448 (10%)
 Frame = +2

Query: 41   MIASRSWSFIRVGHAWKLANTHFLSNNSIHFFQQGYKGYHGLS-NFSNT--------MDR 193
            MIA RS   I V    K  NT+  S +   +  QG   YH LS NF  +         D 
Sbjct: 1    MIACRS--LIGVERVLKFTNTYVASRS---YCFQGQSAYHCLSCNFMMSGRKKKICLEDH 55

Query: 194  SXXXXXXXXXXXXIST------QSYVGDLGVQ-----------CTTSSSISRQTELKGEG 322
            S            I+T      +S + D  V+           C+TSS+IS +   K   
Sbjct: 56   SIKQKKMNYIWRPIATNASSCDESLMKDALVESEDGCKVQETGCSTSSTISNEHLTKIAA 115

Query: 323  SVFSEDVKVDSAKSV---------------INTGKYSVSVEVAASLIRFVKGKGGSTQRQ 457
               SE  + D++ S                ++T K+S+SV V ASL RF+KGKGGSTQ++
Sbjct: 116  EAMSEIAESDTSPSQLLDNVENRVLEGDSSVSTEKHSISVLVGASLFRFIKGKGGSTQKK 175

Query: 458  IEGETGAKIVFPSSRKENSIVIEGVSSEIVTKASEKVQVIIEEAVKSPNLDYSHFISLPL 637
            IE + G KI+ P+S++E+ + IEG+S   V  ASEK+Q II+E V S NLDYSHFISLPL
Sbjct: 176  IEEDMGVKIIMPTSKEEDFVTIEGISVNSVNSASEKIQAIIDETVNSRNLDYSHFISLPL 235

Query: 638  AVHPELVDKLISFQNSILGAS----DSSKAETLCSESDGDTSDEAE-DNAQQLDIGRDVA 802
            A+HPELV+KLISFQ+SILG      +++  E+  +E +G T+D  E D   + + G  VA
Sbjct: 236  AIHPELVNKLISFQHSILGIGSCMDENTYTESDSNEDEGTTTDTKEVDQLSKENSG--VA 293

Query: 803  VKLKVVDENEQVKVDIKKIPIVRYPPKASKSSNLSDLGIDKSIFIKPKTFHLTVLMLKLW 982
            V+LK  D +E VKV++  IP+V Y PKASKSS  SDLGIDKSIFIKPKTFHLTVLMLKLW
Sbjct: 294  VELKANDNSESVKVNLTNIPLVSYAPKASKSSAPSDLGIDKSIFIKPKTFHLTVLMLKLW 353

Query: 983  NNERITAATEVLQEVASKVVDALEGRPVFVRLKGLECMRGPLAKARVLYTPVEVIGGEDR 1162
            NNERI  A+EVLQ ++SKV++AL+ RP+ +RLKGLECM+G LAKARVLY PVE I  E R
Sbjct: 354  NNERIKTASEVLQSISSKVMEALDNRPLSIRLKGLECMKGSLAKARVLYAPVEEIASEGR 413

Query: 1163 LLRACQVITDAYVEAGLVFEKDARQKFK 1246
            LLRACQVI DAYVEAGLV E DA+QK K
Sbjct: 414  LLRACQVIIDAYVEAGLVLENDAKQKLK 441


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