BLASTX nr result
ID: Coptis25_contig00013223
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00013223 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK35091.1| unknown [Lotus japonicus] 73 6e-13 ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|22354... 72 8e-13 ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815... 73 2e-12 emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera] 70 3e-12 ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262... 70 3e-12 >gb|AFK35091.1| unknown [Lotus japonicus] Length = 529 Score = 72.8 bits (177), Expect(2) = 6e-13 Identities = 34/47 (72%), Positives = 40/47 (85%) Frame = +1 Query: 52 YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192 Y SKE+ E G+V F+RI F+G+R SFEMLKRV GDNNSNVYELL+RA Sbjct: 483 YSSKETAEHGSVMFKRIEFIGSRTSFEMLKRVAGDNNSNVYELLLRA 529 Score = 25.8 bits (55), Expect(2) = 6e-13 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 Query: 2 ENMTADEVVAAIHTD 46 ENM++ E+ AAIHTD Sbjct: 458 ENMSSQEIEAAIHTD 472 >ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|223544647|gb|EEF46163.1| topbp1, putative [Ricinus communis] Length = 556 Score = 71.6 bits (174), Expect(2) = 8e-13 Identities = 36/47 (76%), Positives = 39/47 (82%) Frame = +1 Query: 52 YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192 Y SKE+ E G V F+RI FLG+R SFEMLKRV GDNNSNVYELLIRA Sbjct: 510 YSSKETAELGYVIFKRIDFLGSRTSFEMLKRVSGDNNSNVYELLIRA 556 Score = 26.6 bits (57), Expect(2) = 8e-13 Identities = 12/15 (80%), Positives = 12/15 (80%) Frame = +2 Query: 2 ENMTADEVVAAIHTD 46 ENM A EV AAIHTD Sbjct: 485 ENMPASEVEAAIHTD 499 >ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815253 [Glycine max] Length = 541 Score = 73.2 bits (178), Expect(2) = 2e-12 Identities = 35/47 (74%), Positives = 40/47 (85%) Frame = +1 Query: 52 YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192 Y SKE+ ESG V F+R+ FLG+R SFEMLKRV GDNNSNVYELL+RA Sbjct: 495 YSSKETAESGYVMFKRVEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 541 Score = 23.5 bits (49), Expect(2) = 2e-12 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +2 Query: 2 ENMTADEVVAAIHTD 46 ENM+ E+ AAIH+D Sbjct: 470 ENMSRQEIEAAIHSD 484 >emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera] Length = 565 Score = 70.1 bits (170), Expect(2) = 3e-12 Identities = 34/47 (72%), Positives = 39/47 (82%) Frame = +1 Query: 52 YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192 Y SKE+ E G F+RI FLG+R+SFEMLKRV GDNNSNVYEL+IRA Sbjct: 519 YSSKETGERGYAIFKRIDFLGSRKSFEMLKRVSGDNNSNVYELVIRA 565 Score = 26.2 bits (56), Expect(2) = 3e-12 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +2 Query: 2 ENMTADEVVAAIHTD 46 ENMT E+ AAIHTD Sbjct: 494 ENMTLHEIEAAIHTD 508 >ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262753 isoform 1 [Vitis vinifera] Length = 551 Score = 70.1 bits (170), Expect(2) = 3e-12 Identities = 34/47 (72%), Positives = 39/47 (82%) Frame = +1 Query: 52 YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192 Y SKE+ E G F+RI FLG+R+SFEMLKRV GDNNSNVYEL+IRA Sbjct: 505 YSSKETGERGYAIFKRIDFLGSRKSFEMLKRVSGDNNSNVYELVIRA 551 Score = 26.2 bits (56), Expect(2) = 3e-12 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +2 Query: 2 ENMTADEVVAAIHTD 46 ENMT E+ AAIHTD Sbjct: 480 ENMTLHEIEAAIHTD 494