BLASTX nr result

ID: Coptis25_contig00013223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013223
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35091.1| unknown [Lotus japonicus]                               73   6e-13
ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|22354...    72   8e-13
ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815...    73   2e-12
emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]    70   3e-12
ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262...    70   3e-12

>gb|AFK35091.1| unknown [Lotus japonicus]
          Length = 529

 Score = 72.8 bits (177), Expect(2) = 6e-13
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +1

Query: 52  YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192
           Y SKE+ E G+V F+RI F+G+R SFEMLKRV GDNNSNVYELL+RA
Sbjct: 483 YSSKETAEHGSVMFKRIEFIGSRTSFEMLKRVAGDNNSNVYELLLRA 529



 Score = 25.8 bits (55), Expect(2) = 6e-13
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 2   ENMTADEVVAAIHTD 46
           ENM++ E+ AAIHTD
Sbjct: 458 ENMSSQEIEAAIHTD 472


>ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|223544647|gb|EEF46163.1|
           topbp1, putative [Ricinus communis]
          Length = 556

 Score = 71.6 bits (174), Expect(2) = 8e-13
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = +1

Query: 52  YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192
           Y SKE+ E G V F+RI FLG+R SFEMLKRV GDNNSNVYELLIRA
Sbjct: 510 YSSKETAELGYVIFKRIDFLGSRTSFEMLKRVSGDNNSNVYELLIRA 556



 Score = 26.6 bits (57), Expect(2) = 8e-13
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +2

Query: 2   ENMTADEVVAAIHTD 46
           ENM A EV AAIHTD
Sbjct: 485 ENMPASEVEAAIHTD 499


>ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815253 [Glycine max]
          Length = 541

 Score = 73.2 bits (178), Expect(2) = 2e-12
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = +1

Query: 52  YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192
           Y SKE+ ESG V F+R+ FLG+R SFEMLKRV GDNNSNVYELL+RA
Sbjct: 495 YSSKETAESGYVMFKRVEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 541



 Score = 23.5 bits (49), Expect(2) = 2e-12
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 2   ENMTADEVVAAIHTD 46
           ENM+  E+ AAIH+D
Sbjct: 470 ENMSRQEIEAAIHSD 484


>emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]
          Length = 565

 Score = 70.1 bits (170), Expect(2) = 3e-12
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +1

Query: 52  YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192
           Y SKE+ E G   F+RI FLG+R+SFEMLKRV GDNNSNVYEL+IRA
Sbjct: 519 YSSKETGERGYAIFKRIDFLGSRKSFEMLKRVSGDNNSNVYELVIRA 565



 Score = 26.2 bits (56), Expect(2) = 3e-12
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 2   ENMTADEVVAAIHTD 46
           ENMT  E+ AAIHTD
Sbjct: 494 ENMTLHEIEAAIHTD 508


>ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262753 isoform 1 [Vitis
           vinifera]
          Length = 551

 Score = 70.1 bits (170), Expect(2) = 3e-12
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +1

Query: 52  YVSKESQESGNVQFRRISFLGTRRSFEMLKRVGGDNNSNVYELLIRA 192
           Y SKE+ E G   F+RI FLG+R+SFEMLKRV GDNNSNVYEL+IRA
Sbjct: 505 YSSKETGERGYAIFKRIDFLGSRKSFEMLKRVSGDNNSNVYELVIRA 551



 Score = 26.2 bits (56), Expect(2) = 3e-12
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 2   ENMTADEVVAAIHTD 46
           ENMT  E+ AAIHTD
Sbjct: 480 ENMTLHEIEAAIHTD 494


Top