BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013214
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173041.1| CC-NBS-LRR class disease resistance protein [Ar...   108   4e-22
gb|AAF82158.1|AC034256_22 Contains similarity to NBS/LRR disease...   108   4e-22
ref|NP_194452.1| NB-ARC domain-containing disease resistance pro...    98   6e-19
gb|ACP30621.1| disease resistance protein [Brassica rapa subsp. ...    97   1e-18
gb|AFC90799.1| nucleotide-binding site leucine-rich repeat prote...    97   2e-18

>ref|NP_173041.1| CC-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
           gi|374095383|sp|Q9LMP6.2|DRL3_ARATH RecName:
           Full=Probable disease resistance protein At1g15890
           gi|332191259|gb|AEE29380.1| CC-NBS-LRR class disease
           resistance protein [Arabidopsis thaliana]
          Length = 851

 Score =  108 bits (270), Expect = 4e-22
 Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 9/140 (6%)
 Frame = -2

Query: 394 TRSREVCERM-CQKDVNVGRLLEDEPWELFVKNVEKFP----SXXXXXXXXXXXECCGLP 230
           TRS++VC  M    ++ V  L  DE WELF K V   P                +CCGLP
Sbjct: 290 TRSKDVCRDMEVDGEMKVDCLPPDEAWELFQKKVGPIPLQSHEDIPTLARKVAEKCCGLP 349

Query: 229 LAIITVGQAM-KRKTVKEWQLAFRDLQESLNM--AMEEKVIQRLKFSYDQLKENHQK-CF 62
           LA+  +G+AM  R+TV+EWQ     L  S +   +MEEK++  LKFSYD LK+   K CF
Sbjct: 350 LALSVIGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCF 409

Query: 61  LYCALYPEDYEINPSELIEY 2
           LYC+L+PEDYE+   ELIEY
Sbjct: 410 LYCSLFPEDYEVRKEELIEY 429


>gb|AAF82158.1|AC034256_22 Contains similarity to NBS/LRR disease resistance protein
           gi|3309619 from Arabidopsis thaliana gb|AF074916 and
           contains a NB-ARC PF|00931 domain and multiple Leucine
           Rich PF|00560 Repeats [Arabidopsis thaliana]
          Length = 921

 Score =  108 bits (270), Expect = 4e-22
 Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 9/140 (6%)
 Frame = -2

Query: 394 TRSREVCERM-CQKDVNVGRLLEDEPWELFVKNVEKFP----SXXXXXXXXXXXECCGLP 230
           TRS++VC  M    ++ V  L  DE WELF K V   P                +CCGLP
Sbjct: 360 TRSKDVCRDMEVDGEMKVDCLPPDEAWELFQKKVGPIPLQSHEDIPTLARKVAEKCCGLP 419

Query: 229 LAIITVGQAM-KRKTVKEWQLAFRDLQESLNM--AMEEKVIQRLKFSYDQLKENHQK-CF 62
           LA+  +G+AM  R+TV+EWQ     L  S +   +MEEK++  LKFSYD LK+   K CF
Sbjct: 420 LALSVIGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCF 479

Query: 61  LYCALYPEDYEINPSELIEY 2
           LYC+L+PEDYE+   ELIEY
Sbjct: 480 LYCSLFPEDYEVRKEELIEY 499


>ref|NP_194452.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|46395628|sp|O81825.1|DRL28_ARATH RecName:
           Full=Probable disease resistance protein At4g27220
           gi|3269283|emb|CAA19716.1| putative protein [Arabidopsis
           thaliana] gi|7269575|emb|CAB79577.1| putative protein
           [Arabidopsis thaliana] gi|91806732|gb|ABE66093.1|
           disease resistance protein [Arabidopsis thaliana]
           gi|332659912|gb|AEE85312.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 919

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
 Frame = -2

Query: 394 TRSREVCERMC-QKDVNVGRLLEDEPWELFVKNVEKFPSXXXXXXXXXXXE--CCGLPLA 224
           +R  EVC++M   +++ V  L E E WELF  NV +  +              CCGLPLA
Sbjct: 252 SRRLEVCQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVSHECCGLPLA 311

Query: 223 IITVGQAMKRKT-VKEWQLAFRDLQESL-NMAMEEKVIQRLKFSYDQLKENHQKCFLYCA 50
           IIT+G+ ++ K  V+ W+     L+ S  ++  EEK+   LK SYD L++N + CFL+CA
Sbjct: 312 IITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCFLFCA 371

Query: 49  LYPEDYEINPSELIEY 2
           L+PEDY I  SELI Y
Sbjct: 372 LFPEDYSIKVSELIMY 387


>gb|ACP30621.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 813

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 64/140 (45%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
 Frame = -2

Query: 394 TRSREVCERMCQKD-VNVGRLLEDEPWELFVKNVE----KFPSXXXXXXXXXXXECCGLP 230
           TRS+EVC  M   D + +  L  +E WELF   V     K              +C GLP
Sbjct: 290 TRSKEVCSDMEADDKLQIDCLPANEAWELFRSIVGEDTLKLHQDIPTLAKKICEKCYGLP 349

Query: 229 LAIITVGQAMKRKT-VKEWQLAFRDLQESLNM--AMEEKVIQRLKFSYDQLKENHQK-CF 62
           LA+  +G+AMK K  V EW+ A + L  S +    MEEK++  LKFSYD LKE + K CF
Sbjct: 350 LALNVIGKAMKYKEDVHEWRHAKKVLSTSSHEFPGMEEKILSILKFSYDGLKEENVKSCF 409

Query: 61  LYCALYPEDYEINPSELIEY 2
           LYC+L+PEDYEI   ELIEY
Sbjct: 410 LYCSLFPEDYEIKKEELIEY 429


>gb|AFC90799.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 63/139 (45%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
 Frame = -2

Query: 394 TRSREVCERMCQKDVNVGRLLEDEPWELFVK----NVEKFPSXXXXXXXXXXXECCGLPL 227
           TRS EVC RM  K V V  L E+E   LF++    N    P            EC  LPL
Sbjct: 104 TRSFEVCRRMRCKPVRVELLTEEEALTLFLRKAVGNDTMLPPKLEEIATQVFKECARLPL 163

Query: 226 AIITVGQAMKR-KTVKEWQLAFRDLQESLNMAM--EEKVIQRLKFSYDQLKENH-QKCFL 59
           AI+TVG +++  K ++EW+ A  +L  S   A   E +V +RLKFSY +L     Q CFL
Sbjct: 164 AIVTVGGSLRGLKRIREWRNALNELINSTKDASDDESEVFERLKFSYSRLGNKVLQDCFL 223

Query: 58  YCALYPEDYEINPSELIEY 2
           YCALYPED+EI   ELIEY
Sbjct: 224 YCALYPEDHEIRVDELIEY 242