BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013204
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520975.1| trytophan synthase alpha subunit, putative [...   231   9e-59
ref|NP_567004.1| tryptophan synthase alpha chain [Arabidopsis th...   227   1e-57
gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consol...   225   5e-57
gb|AAM65526.1| tryptophan synthase alpha chain [Arabidopsis thal...   225   5e-57
dbj|BAE98558.1| tryptophan synthase alpha chain [Arabidopsis tha...   224   9e-57

>ref|XP_002520975.1| trytophan synthase alpha subunit, putative [Ricinus communis]
           gi|223539812|gb|EEF41392.1| trytophan synthase alpha
           subunit, putative [Ricinus communis]
          Length = 313

 Score =  231 bits (588), Expect = 9e-59
 Identities = 124/200 (62%), Positives = 143/200 (71%), Gaps = 4/200 (2%)
 Frame = +3

Query: 12  ISLRVSFSN----AKVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADG 179
           +SL  +FSN     KVAFIPY+ AGDPDLSTTAEALK+LDSCGSD+IELG+P+SDP+ADG
Sbjct: 50  LSLSETFSNLKKRGKVAFIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADG 109

Query: 180 PVIQAACTRALANGTSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAG 359
           PVIQAA TR+LA GT+ D+I SMLK+V+P++SCPI LFTYYN I KRGI  FM+ + D G
Sbjct: 110 PVIQAAATRSLARGTNFDAITSMLKEVVPQLSCPIALFTYYNPILKRGIEKFMSTVKDIG 169

Query: 360 VHGLVVPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEETAYLRKEAAKNDIEMVQL 539
           VHGLVVPDV                              LEET  LR EAAK +IE+V L
Sbjct: 170 VHGLVVPDVP-----------------------------LEETELLRNEAAKKNIELVLL 200

Query: 540 TTPTTSTERMKLIVEAAEGF 599
           TTPTT TERMK IVEAAEGF
Sbjct: 201 TTPTTPTERMKAIVEAAEGF 220


>ref|NP_567004.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
           gi|75102736|sp|Q42529.1|TRPA2_ARATH RecName:
           Full=Tryptophan synthase alpha chain, chloroplastic;
           AltName: Full=Indole-3-glycerol-phosphate lyase,
           chloroplastic; AltName: Full=Protein
           TRYPTOPHAN-REQUIRING 3; Flags: Precursor
           gi|619753|gb|AAC49117.1| tryptophan synthase alpha chain
           [Arabidopsis thaliana] gi|7258367|emb|CAB77584.1|
           tryptophan synthase alpha chain [Arabidopsis thaliana]
           gi|108385367|gb|ABF85777.1| At3g54640 [Arabidopsis
           thaliana] gi|332645739|gb|AEE79260.1| tryptophan
           synthase alpha chain [Arabidopsis thaliana]
           gi|1585768|prf||2201482A Trp synthase:SUBUNIT=alpha
          Length = 312

 Score =  227 bits (579), Expect = 1e-57
 Identities = 118/186 (63%), Positives = 137/186 (73%)
 Frame = +3

Query: 42  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 221
           KVAFIPY+ AGDPDLSTTAEALKVLD+CGSD+IELG+P+SDP+ADGPVIQAA TR+L  G
Sbjct: 63  KVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERG 122

Query: 222 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVXXXXX 401
           T+LDSI+ ML KV+P+ISCPI+LFTYYN I KRG+G FM+++   GV GLVVPDV     
Sbjct: 123 TNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVP---- 178

Query: 402 XXXXXXXXXXXXXXXXXXXXXXXXRLEETAYLRKEAAKNDIEMVQLTTPTTSTERMKLIV 581
                                    LEET  LRKEA  NDIE+V LTTPTT TERMKLIV
Sbjct: 179 -------------------------LEETEMLRKEALNNDIELVLLTTPTTPTERMKLIV 213

Query: 582 EAAEGF 599
           +A+EGF
Sbjct: 214 DASEGF 219


>gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consolida orientalis]
          Length = 319

 Score =  225 bits (573), Expect = 5e-57
 Identities = 114/186 (61%), Positives = 137/186 (73%)
 Frame = +3

Query: 42  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 221
           +VAFIP++ AGDPDLSTTAEALKVLDSCGSD+IELG+P+SDP+ADGPVIQAA TRALA G
Sbjct: 70  RVAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALARG 129

Query: 222 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVXXXXX 401
           T+ D+I++ML+ V+P++SCP+ LF+YYN I KRGIG FM  + D GVHGLVVPDV     
Sbjct: 130 TNFDAILAMLEGVVPQLSCPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVP---- 185

Query: 402 XXXXXXXXXXXXXXXXXXXXXXXXRLEETAYLRKEAAKNDIEMVQLTTPTTSTERMKLIV 581
                                    LEETA LR+EA KN IE++ LTTPTT T+RMK IV
Sbjct: 186 -------------------------LEETAMLREEALKNQIELILLTTPTTPTDRMKAIV 220

Query: 582 EAAEGF 599
           EA+EGF
Sbjct: 221 EASEGF 226


>gb|AAM65526.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
          Length = 312

 Score =  225 bits (573), Expect = 5e-57
 Identities = 117/186 (62%), Positives = 136/186 (73%)
 Frame = +3

Query: 42  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 221
           KVAFIPY+ AGDPDLSTTAEALKVLD+CGSD+IELG+P+SDP+ADGPVIQAA TR+L  G
Sbjct: 63  KVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERG 122

Query: 222 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVXXXXX 401
           T+LDSI+ ML KV+P+ISCPI+LFTYYN I KRG+G FM+++   GV GLVVPDV     
Sbjct: 123 TNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVP---- 178

Query: 402 XXXXXXXXXXXXXXXXXXXXXXXXRLEETAYLRKEAAKNDIEMVQLTTPTTSTERMKLIV 581
                                    LEET  LRKEA  NDIE+V LTTPTT TERMK IV
Sbjct: 179 -------------------------LEETEMLRKEALNNDIELVLLTTPTTPTERMKRIV 213

Query: 582 EAAEGF 599
           +A+EGF
Sbjct: 214 DASEGF 219


>dbj|BAE98558.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
          Length = 312

 Score =  224 bits (571), Expect = 9e-57
 Identities = 117/186 (62%), Positives = 136/186 (73%)
 Frame = +3

Query: 42  KVAFIPYVVAGDPDLSTTAEALKVLDSCGSDVIELGIPFSDPIADGPVIQAACTRALANG 221
           KVA IPY+ AGDPDLSTTAEALKVLD+CGSD+IELG+P+SDP+ADGPVIQAA TR+L  G
Sbjct: 63  KVACIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSLERG 122

Query: 222 TSLDSIMSMLKKVLPEISCPITLFTYYNVIHKRGIGNFMAALNDAGVHGLVVPDVXXXXX 401
           T+LDSI+ ML KV+P+ISCPI+LFTYYN I KRG+G FM+++   GV GLVVPDV     
Sbjct: 123 TNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVP---- 178

Query: 402 XXXXXXXXXXXXXXXXXXXXXXXXRLEETAYLRKEAAKNDIEMVQLTTPTTSTERMKLIV 581
                                    LEET  LRKEA  NDIE+V LTTPTT TERMKLIV
Sbjct: 179 -------------------------LEETEMLRKEALNNDIELVLLTTPTTPTERMKLIV 213

Query: 582 EAAEGF 599
           +A+EGF
Sbjct: 214 DASEGF 219