BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013202
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   182   6e-44
ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus c...   181   8e-44
ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis tha...   179   4e-43
gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]           179   4e-43
ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group] g...   177   2e-42

>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
           protein product [Vitis vinifera]
          Length = 421

 Score =  182 bits (461), Expect = 6e-44
 Identities = 94/108 (87%), Positives = 100/108 (92%), Gaps = 1/108 (0%)
 Frame = +1

Query: 328 ISQVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFTNQIRSKLSTF 507
           +  VAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIF NQ+R+KLSTF
Sbjct: 196 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTF 255

Query: 508 GAF-GPQEVTSGGNALKFYASVRLNVKRIGLVKKGEETVGSQVQVKIV 648
           G F GP EVT GGNALKFYASVRLN+KRIGLVKKGEET+GSQV VK+V
Sbjct: 256 GGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQVLVKVV 303


>ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus communis]
           gi|223546579|gb|EEF48077.1| DNA repair protein reca,
           putative [Ricinus communis]
          Length = 380

 Score =  181 bits (460), Expect = 8e-44
 Identities = 91/108 (84%), Positives = 101/108 (93%), Gaps = 1/108 (0%)
 Frame = +1

Query: 328 ISQVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFTNQIRSKLSTF 507
           +  VAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS S+T+LIF NQ+R+KLSTF
Sbjct: 156 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSQSETVLIFINQVRAKLSTF 215

Query: 508 GAF-GPQEVTSGGNALKFYASVRLNVKRIGLVKKGEETVGSQVQVKIV 648
           G F GPQEVT GGNALKFYASVRLN++R+GL+KKGEET+GSQVQVKIV
Sbjct: 216 GGFGGPQEVTCGGNALKFYASVRLNIRRVGLIKKGEETIGSQVQVKIV 263


>ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
           gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
           repair protein recA homolog 3, mitochondrial; AltName:
           Full=Recombinase A homolog 3; Flags: Precursor
           gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
           thaliana] gi|330251794|gb|AEC06888.1| DNA repair protein
           recA-like 3 [Arabidopsis thaliana]
          Length = 430

 Score =  179 bits (454), Expect = 4e-43
 Identities = 92/108 (85%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = +1

Query: 328 ISQVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFTNQIRSKLSTF 507
           +  VAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIF NQ+RSKLSTF
Sbjct: 196 VDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTF 255

Query: 508 GAF-GPQEVTSGGNALKFYASVRLNVKRIGLVKKGEETVGSQVQVKIV 648
           G F GP EVT GGNALKFYAS+RLN+KRIGL+KKGEET GSQV VKIV
Sbjct: 256 GGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVSVKIV 303


>gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]
          Length = 376

 Score =  179 bits (454), Expect = 4e-43
 Identities = 92/108 (85%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = +1

Query: 328 ISQVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFTNQIRSKLSTF 507
           +  VAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIF NQ+RSKLSTF
Sbjct: 142 VDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTF 201

Query: 508 GAF-GPQEVTSGGNALKFYASVRLNVKRIGLVKKGEETVGSQVQVKIV 648
           G F GP EVT GGNALKFYAS+RLN+KRIGL+KKGEET GSQV VKIV
Sbjct: 202 GGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVSVKIV 249


>ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
           gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza
           sativa Japonica Group] gi|56784869|dbj|BAD82109.1|
           putative recA protein [Oryza sativa Japonica Group]
           gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa
           Japonica Group] gi|222619696|gb|EEE55828.1| hypothetical
           protein OsJ_04434 [Oryza sativa Japonica Group]
          Length = 429

 Score =  177 bits (449), Expect = 2e-42
 Identities = 91/108 (84%), Positives = 100/108 (92%), Gaps = 1/108 (0%)
 Frame = +1

Query: 328 ISQVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFTNQIRSKLSTF 507
           +  VAALVPK ELDGEMGDAH+A+QARLMSQALRKLSHSLSLSQTIL+F NQIRSK++TF
Sbjct: 203 VDSVAALVPKSELDGEMGDAHVALQARLMSQALRKLSHSLSLSQTILLFINQIRSKVTTF 262

Query: 508 GAF-GPQEVTSGGNALKFYASVRLNVKRIGLVKKGEETVGSQVQVKIV 648
           G F GP EVTSGGNALKFYASVR+N+KRIGLVKKGEET+GSQV VKIV
Sbjct: 263 GGFGGPMEVTSGGNALKFYASVRMNIKRIGLVKKGEETIGSQVLVKIV 310