BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013201
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...    87   8e-23
ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...    89   6e-21
gb|AFK40203.1| unknown [Lotus japonicus]                               86   1e-19
dbj|BAJ87408.1| predicted protein [Hordeum vulgare subsp. vulgare]     77   2e-19
ref|NP_196487.1| RNA polymerase II transcriptional coactivator K...    88   2e-19

>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score = 87.0 bits (214), Expect(2) = 8e-23
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = +2

Query: 2   DSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQ 157
           D D+II CEIS+NRRV+VR+WQGK  +DIREFYVKDG  +PGKKGISL+MDQ
Sbjct: 33  DPDNIIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKKGISLTMDQ 84



 Score = 45.4 bits (106), Expect(2) = 8e-23
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +1

Query: 214 ISLSMDQWQILRDHMDAIDEAVADN 288
           ISL+MDQW +LRDH++ IDEAVADN
Sbjct: 78  ISLTMDQWNVLRDHVNEIDEAVADN 102


>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score = 89.4 bits (220), Expect(2) = 6e-21
 Identities = 39/52 (75%), Positives = 47/52 (90%)
 Frame = +2

Query: 2   DSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQ 157
           D+D+I+ CE+SKNRRV VR+WQGK V+DIREFYVKDG  +PGKKGISLS+DQ
Sbjct: 31  DTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQ 82



 Score = 37.0 bits (84), Expect(2) = 6e-21
 Identities = 15/28 (53%), Positives = 23/28 (82%)
 Frame = +1

Query: 214 ISLSMDQWQILRDHMDAIDEAVADNT*G 297
           ISLS+DQW +L +H++ ID+AV +N+ G
Sbjct: 76  ISLSLDQWNVLLNHVEEIDKAVNENSSG 103


>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score = 85.5 bits (210), Expect(2) = 1e-19
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = +2

Query: 2   DSDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQ 157
           D D I+ CEISKNRRV+VR+WQG+ V+DI EFYVKDG  +PGKKGISL+MDQ
Sbjct: 36  DPDSIVVCEISKNRRVSVRNWQGRIVVDILEFYVKDGKQMPGKKGISLTMDQ 87



 Score = 36.6 bits (83), Expect(2) = 1e-19
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = +1

Query: 214 ISLSMDQWQILRDHMDAIDEAVADN 288
           ISL+MDQW +LR+H++ ID+AV ++
Sbjct: 81  ISLTMDQWNVLRNHIEEIDKAVNES 105


>dbj|BAJ87408.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 106

 Score = 76.6 bits (187), Expect(2) = 2e-19
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = +2

Query: 8   DDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQ 157
           D I+  +ISKN+RV VRSW GK ++D+REFYVKDG +LP +KGISLSMDQ
Sbjct: 38  DGIVVAQISKNKRVAVRSWNGKVMVDMREFYVKDGKSLPTRKGISLSMDQ 87



 Score = 44.7 bits (104), Expect(2) = 2e-19
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +1

Query: 214 ISLSMDQWQILRDHMDAIDEAVADNT 291
           ISLSMDQW+ILRD++ AIDEAV +NT
Sbjct: 81  ISLSMDQWEILRDNIKAIDEAVKENT 106


>ref|NP_196487.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
           thaliana] gi|37079587|sp|O65154.1|KIWI_ARATH RecName:
           Full=RNA polymerase II transcriptional coactivator KIWI
           gi|2997684|gb|AAC08574.1| putative transcriptional
           co-activator [Arabidopsis thaliana]
           gi|9955512|emb|CAC05451.1| putative transcriptional
           co-activator (KIWI) [Arabidopsis thaliana]
           gi|28466805|gb|AAO44011.1| At5g09250 [Arabidopsis
           thaliana] gi|110736129|dbj|BAF00036.1| putative
           transcriptional co-activator [Arabidopsis thaliana]
           gi|225898901|dbj|BAH30581.1| hypothetical protein
           [Arabidopsis thaliana] gi|332003981|gb|AED91364.1| RNA
           polymerase II transcriptional coactivator KIWI
           [Arabidopsis thaliana]
          Length = 107

 Score = 87.8 bits (216), Expect(2) = 2e-19
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = +2

Query: 5   SDDIIACEISKNRRVTVRSWQGKPVIDIREFYVKDGNTLPGKKGISLSMDQ 157
           SDDI+ C ISKNRRV+VR+W GK  IDIREFYVKDG TLPGKKGISLS+DQ
Sbjct: 38  SDDIVVCNISKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGKKGISLSVDQ 88



 Score = 33.1 bits (74), Expect(2) = 2e-19
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +1

Query: 214 ISLSMDQWQILRDHMDAIDEAVAD 285
           ISLS+DQW  LR+H + I++A++D
Sbjct: 82  ISLSVDQWNTLRNHAEDIEKALSD 105