BLASTX nr result

ID: Coptis25_contig00013194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013194
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306768.1| predicted protein [Populus trichocarpa] gi|2...   325   e-156
ref|XP_002520762.1| hypothetical protein RCOM_0558700 [Ricinus c...   325   e-156
ref|XP_003521242.1| PREDICTED: F-box protein At2g27310 [Glycine ...   311   e-152
ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vit...   325   e-152
ref|XP_002302120.1| predicted protein [Populus trichocarpa] gi|2...   317   e-151

>ref|XP_002306768.1| predicted protein [Populus trichocarpa] gi|222856217|gb|EEE93764.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  325 bits (832), Expect(2) = e-156
 Identities = 154/223 (69%), Positives = 180/223 (80%)
 Frame = -2

Query: 1193 MELSVTQAESMTSLNSDLFYDILGRLDGSTLXXXXXXXXXXXXXSKEEKIWENVCRSLWP 1014
            M +SV   E+  SL+SDLFYDIL RLDG TL             SKEEK+W+NVC S+WP
Sbjct: 1    MAMSVGPVENEASLSSDLFYDILRRLDGPTLASAACACAAFCSISKEEKLWDNVCSSMWP 60

Query: 1013 SVDREDVRSLISRVGGFRKFYADCFPLIVNKEVPVAQWDYYLEYPEEWTEDDYYGEVDEL 834
            S +REDVRSLIS +GGFRKFYADCFPLIVNKEV   QW+ YLEYPEEWTE +YYG+VDE 
Sbjct: 61   STNREDVRSLISSIGGFRKFYADCFPLIVNKEVTEYQWNDYLEYPEEWTEAEYYGDVDEF 120

Query: 833  DSISPSDFISIVDIRYNDKPIYSKVLWGIPDSDGYNGWFSNCPFRIDLLRYSDGDEDHND 654
            +S++PSDF+SIVDIRY DK I SKVLWGIP+++ +NGWF NCPFRIDLL Y+  D+D+  
Sbjct: 121  ESVAPSDFVSIVDIRYKDKTICSKVLWGIPNANEFNGWFYNCPFRIDLLTYAARDDDNEG 180

Query: 653  KVTLSVADGLPPITSIERERKDGKLWKELRDGIRLSWIVVNKK 525
            KV LSV+DGLPPI S+E+ERKDGKLW ELRDG+RLSWIVVNKK
Sbjct: 181  KVFLSVSDGLPPILSMEKERKDGKLWMELRDGLRLSWIVVNKK 223



 Score =  254 bits (648), Expect(2) = e-156
 Identities = 121/150 (80%), Positives = 136/150 (90%), Gaps = 1/150 (0%)
 Frame = -3

Query: 517 QAANVASWSPLGGQRHWPTDKDFLIRFGSILPAKDILPCKVVECILVMKFRVIQM-GEGS 341
           QAAN+ASWSPLGGQRHWPTDKDF+IRFGS+L AKDILPC+VVECIL+MKFRVI   GEG 
Sbjct: 226 QAANLASWSPLGGQRHWPTDKDFVIRFGSVLSAKDILPCQVVECILIMKFRVIHTEGEGV 285

Query: 340 QTTLQLTELSMQLEDMEGSHVNGRNSLLVLREALNCRRSRNYSEALESCHLYSKVQSELK 161
           QTTL LTELSMQLEDMEG+HVNGRNSLL+L+EAL+CRRS+N+SE LESCHLYSK QSEL+
Sbjct: 286 QTTLNLTELSMQLEDMEGAHVNGRNSLLILKEALSCRRSKNHSEVLESCHLYSKAQSELR 345

Query: 160 EEKMRNESWLDRLCIISGITTFFTLWYCIL 71
           EEKM+ ES LDRLCI++GI  F T WYCIL
Sbjct: 346 EEKMKIESRLDRLCIVTGIAAFLTFWYCIL 375


>ref|XP_002520762.1| hypothetical protein RCOM_0558700 [Ricinus communis]
            gi|223540147|gb|EEF41724.1| hypothetical protein
            RCOM_0558700 [Ricinus communis]
          Length = 373

 Score =  325 bits (834), Expect(2) = e-156
 Identities = 151/221 (68%), Positives = 180/221 (81%)
 Frame = -2

Query: 1187 LSVTQAESMTSLNSDLFYDILGRLDGSTLXXXXXXXXXXXXXSKEEKIWENVCRSLWPSV 1008
            +SV Q ESM SL+SD+FYDIL RLDG +L             SKEEK+WENVC S+WPS 
Sbjct: 1    MSVPQVESMASLSSDIFYDILRRLDGPSLASAACACAAFCSISKEEKLWENVCSSMWPST 60

Query: 1007 DREDVRSLISRVGGFRKFYADCFPLIVNKEVPVAQWDYYLEYPEEWTEDDYYGEVDELDS 828
            +REDV+SLIS +GGFRKFYADCFPLIVNKEV   QW+ YLEYPEEWTE +YYG++DE +S
Sbjct: 61   NREDVKSLISSIGGFRKFYADCFPLIVNKEVAEYQWNEYLEYPEEWTEAEYYGDIDEFES 120

Query: 827  ISPSDFISIVDIRYNDKPIYSKVLWGIPDSDGYNGWFSNCPFRIDLLRYSDGDEDHNDKV 648
            I+PSDF+SIVDIRY DK + SKVLWGIP+++G+NGWF NCPFRIDLL Y+  D+D   +V
Sbjct: 121  IAPSDFVSIVDIRYKDKTVCSKVLWGIPNANGFNGWFYNCPFRIDLLTYAARDDDSEGEV 180

Query: 647  TLSVADGLPPITSIERERKDGKLWKELRDGIRLSWIVVNKK 525
             LS +DGLPP+ S+E+ERKDGKLW ELRDG+RLSWIVVNKK
Sbjct: 181  FLSGSDGLPPVLSLEKERKDGKLWTELRDGLRLSWIVVNKK 221



 Score =  253 bits (646), Expect(2) = e-156
 Identities = 123/150 (82%), Positives = 135/150 (90%), Gaps = 1/150 (0%)
 Frame = -3

Query: 517 QAANVASWSPLGGQRHWPTDKDFLIRFGSILPAKDILPCKVVECILVMKFRVIQM-GEGS 341
           QAAN+ASWSPLGGQRHWPTDKDF+IRFGS+L AKDILPC+VVECIL+MKFRVI   GEG 
Sbjct: 224 QAANLASWSPLGGQRHWPTDKDFVIRFGSVLSAKDILPCQVVECILIMKFRVIYTEGEGV 283

Query: 340 QTTLQLTELSMQLEDMEGSHVNGRNSLLVLREALNCRRSRNYSEALESCHLYSKVQSELK 161
            TTL+LTELSMQLEDMEG+HVNGRNSLL+L+ AL+CRRS+NYSE LESCHLYSKVQSE K
Sbjct: 284 GTTLKLTELSMQLEDMEGAHVNGRNSLLILKAALSCRRSKNYSEVLESCHLYSKVQSEFK 343

Query: 160 EEKMRNESWLDRLCIISGITTFFTLWYCIL 71
           EEKMRNES +DRLCIISGI  F T WY IL
Sbjct: 344 EEKMRNESRIDRLCIISGIAAFLTFWYYIL 373


>ref|XP_003521242.1| PREDICTED: F-box protein At2g27310 [Glycine max]
          Length = 373

 Score =  311 bits (798), Expect(2) = e-152
 Identities = 145/221 (65%), Positives = 180/221 (81%)
 Frame = -2

Query: 1187 LSVTQAESMTSLNSDLFYDILGRLDGSTLXXXXXXXXXXXXXSKEEKIWENVCRSLWPSV 1008
            +SV   + + SLNSDLFYDI  RLDG+TL             SKEE +WENVC S+WPS 
Sbjct: 1    MSVAPVDGIPSLNSDLFYDIFRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPST 60

Query: 1007 DREDVRSLISRVGGFRKFYADCFPLIVNKEVPVAQWDYYLEYPEEWTEDDYYGEVDELDS 828
            +REDV+SLIS VGGFRKFYADCFPLIVNKEV   Q + YLEYP+ WTE +YYG+++E +S
Sbjct: 61   NREDVKSLISSVGGFRKFYADCFPLIVNKEVVGYQPNNYLEYPDNWTEAEYYGDMNESES 120

Query: 827  ISPSDFISIVDIRYNDKPIYSKVLWGIPDSDGYNGWFSNCPFRIDLLRYSDGDEDHNDKV 648
            ISPSDF+SIVDIR+  KPI SKVLWGIP+++GY+GWF NCPFRID+L Y+D D++++  V
Sbjct: 121  ISPSDFVSIVDIRFKGKPICSKVLWGIPNANGYDGWFYNCPFRIDILTYADRDDNNDGAV 180

Query: 647  TLSVADGLPPITSIERERKDGKLWKELRDGIRLSWIVVNKK 525
             LSV+DGLPPITS+ERERKDGKLW+ELR+G++LSWI+VN+K
Sbjct: 181  HLSVSDGLPPITSLERERKDGKLWRELREGLQLSWIIVNRK 221



 Score =  255 bits (651), Expect(2) = e-152
 Identities = 121/150 (80%), Positives = 136/150 (90%), Gaps = 1/150 (0%)
 Frame = -3

Query: 517 QAANVASWSPLGGQRHWPTDKDFLIRFGSILPAKDILPCKVVECILVMKFRVIQMGE-GS 341
           QAAN+ASWSPLGGQRHWPTDKDF+IRFGS+LPAKDILPC+V ECIL+MKFRVI   E G 
Sbjct: 224 QAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVAECILIMKFRVIHTEEDGF 283

Query: 340 QTTLQLTELSMQLEDMEGSHVNGRNSLLVLREALNCRRSRNYSEALESCHLYSKVQSELK 161
           QTTL+LTELSMQLEDMEG+HVNGRNSLL+L+EAL+ RRS+NY E LESCH+YSKVQ+ELK
Sbjct: 284 QTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSSRRSKNYGEVLESCHMYSKVQNELK 343

Query: 160 EEKMRNESWLDRLCIISGITTFFTLWYCIL 71
           EEKMRNES LDRLCI+SGI  F T WYC+L
Sbjct: 344 EEKMRNESRLDRLCILSGIAAFMTFWYCVL 373


>ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 379

 Score =  325 bits (832), Expect(2) = e-152
 Identities = 150/223 (67%), Positives = 182/223 (81%)
 Frame = -2

Query: 1193 MELSVTQAESMTSLNSDLFYDILGRLDGSTLXXXXXXXXXXXXXSKEEKIWENVCRSLWP 1014
            + +SV Q +SM  L+SD+FYDIL RLDG TL             S+EE++WENVC S+WP
Sbjct: 5    LAMSVAQVDSMAPLSSDIFYDILRRLDGLTLASAACACAAFCSISREERLWENVCSSMWP 64

Query: 1013 SVDREDVRSLISRVGGFRKFYADCFPLIVNKEVPVAQWDYYLEYPEEWTEDDYYGEVDEL 834
            S +REDV+SLIS +GGFRKFYADCFPLIVNKEVP  QW+ Y  YPEEW+E +YYG++D+ 
Sbjct: 65   STNREDVKSLISSIGGFRKFYADCFPLIVNKEVPEFQWNDYHGYPEEWSEAEYYGDMDDF 124

Query: 833  DSISPSDFISIVDIRYNDKPIYSKVLWGIPDSDGYNGWFSNCPFRIDLLRYSDGDEDHND 654
            +SISPSDF+SIVDIRY DK I SKVLWGIP+++G+NGWF NCPFRIDLL YS  D+   D
Sbjct: 125  ESISPSDFVSIVDIRYKDKTICSKVLWGIPNANGFNGWFDNCPFRIDLLTYSPSDDHQED 184

Query: 653  KVTLSVADGLPPITSIERERKDGKLWKELRDGIRLSWIVVNKK 525
            +VTLSV+DGLPPI+S++RERKDGKLW ELRDGIRLSWIV+N+K
Sbjct: 185  EVTLSVSDGLPPISSMQRERKDGKLWCELRDGIRLSWIVLNRK 227



 Score =  241 bits (614), Expect(2) = e-152
 Identities = 117/150 (78%), Positives = 133/150 (88%), Gaps = 1/150 (0%)
 Frame = -3

Query: 517 QAANVASWSPLGGQRHWPTDKDFLIRFGSILPAKDILPCKVVECILVMKFRVIQM-GEGS 341
           QAAN++SWSPLGGQRHWPTDKDFLIRFGS++PAKDILPC+VVECILVMKFRVI   G+G 
Sbjct: 230 QAANLSSWSPLGGQRHWPTDKDFLIRFGSVIPAKDILPCRVVECILVMKFRVIHTEGDGV 289

Query: 340 QTTLQLTELSMQLEDMEGSHVNGRNSLLVLREALNCRRSRNYSEALESCHLYSKVQSELK 161
           QTTL+LTELSMQLEDMEG+HVNGRNSLL+L+EAL+C RS+NY E LESC+LYSKVQ+ELK
Sbjct: 290 QTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSCHRSKNYGEFLESCNLYSKVQNELK 349

Query: 160 EEKMRNESWLDRLCIISGITTFFTLWYCIL 71
           EEKMR ES LD+ CI+SGI  F    Y IL
Sbjct: 350 EEKMRIESRLDKFCILSGIVAFIAFCYYIL 379


>ref|XP_002302120.1| predicted protein [Populus trichocarpa] gi|222843846|gb|EEE81393.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  317 bits (812), Expect(2) = e-151
 Identities = 151/223 (67%), Positives = 180/223 (80%)
 Frame = -2

Query: 1193 MELSVTQAESMTSLNSDLFYDILGRLDGSTLXXXXXXXXXXXXXSKEEKIWENVCRSLWP 1014
            M +SV   ESM SL+SDLFY+IL RLDG TL             SKEEK+WENVC S+WP
Sbjct: 1    MAVSVAPVESMASLSSDLFYEILRRLDGPTLASAACACVAFCSISKEEKLWENVCSSMWP 60

Query: 1013 SVDREDVRSLISRVGGFRKFYADCFPLIVNKEVPVAQWDYYLEYPEEWTEDDYYGEVDEL 834
            S  REDV+SLIS +GGFRKFYADCFPLIVNKEV   Q + +LEYPEEWTE +YYG+VDE 
Sbjct: 61   STSREDVKSLISCIGGFRKFYADCFPLIVNKEVTEYQLNDHLEYPEEWTEAEYYGDVDEF 120

Query: 833  DSISPSDFISIVDIRYNDKPIYSKVLWGIPDSDGYNGWFSNCPFRIDLLRYSDGDEDHND 654
            +S++PSDF+SIVDIRY D+ I SKVLWGIP+++ +NGWF NCPFRIDLL Y+  D+D++ 
Sbjct: 121  ESVAPSDFVSIVDIRYKDRTICSKVLWGIPNANEFNGWFYNCPFRIDLLTYAARDDDNDG 180

Query: 653  KVTLSVADGLPPITSIERERKDGKLWKELRDGIRLSWIVVNKK 525
            +V LSV+DGLPPI S+E+ERKDGKLW ELRDG+RLSWIVVNKK
Sbjct: 181  EVFLSVSDGLPPILSMEKERKDGKLWTELRDGLRLSWIVVNKK 223



 Score =  246 bits (627), Expect(2) = e-151
 Identities = 121/150 (80%), Positives = 133/150 (88%), Gaps = 1/150 (0%)
 Frame = -3

Query: 517 QAANVASWSPLGGQRHWPTDKDFLIRFGSILPAKDILPCKVVECILVMKFRVIQM-GEGS 341
           QAAN+ASWSPLGGQRHWPTDKDF+IRFGS+L AK ILPC+VVECIL+MKFRVI   GEG 
Sbjct: 226 QAANLASWSPLGGQRHWPTDKDFVIRFGSVLSAKGILPCQVVECILIMKFRVIHAEGEGV 285

Query: 340 QTTLQLTELSMQLEDMEGSHVNGRNSLLVLREALNCRRSRNYSEALESCHLYSKVQSELK 161
           QTTL+LTELSMQLEDMEG+HVNGRNSL +L++AL+C RS+NYSE LESCHLYSK QSELK
Sbjct: 286 QTTLKLTELSMQLEDMEGAHVNGRNSLNILKKALSCHRSKNYSEVLESCHLYSKAQSELK 345

Query: 160 EEKMRNESWLDRLCIISGITTFFTLWYCIL 71
           EEKMRNES LDRL IISGI  F T WY IL
Sbjct: 346 EEKMRNESRLDRLRIISGIAAFLTFWYYIL 375


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