BLASTX nr result

ID: Coptis25_contig00013180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013180
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535421.1| PREDICTED: uncharacterized protein LOC100782...   116   5e-24
ref|NP_174175.2| uncharacterized protein [Arabidopsis thaliana] ...   114   2e-23
ref|NP_973929.2| uncharacterized protein [Arabidopsis thaliana] ...   114   2e-23
ref|XP_002893534.1| hypothetical protein ARALYDRAFT_473074 [Arab...   114   2e-23
ref|XP_003541453.1| PREDICTED: uncharacterized protein LOC100785...   113   4e-23

>ref|XP_003535421.1| PREDICTED: uncharacterized protein LOC100782020 [Glycine max]
          Length = 607

 Score =  116 bits (290), Expect = 5e-24
 Identities = 51/74 (68%), Positives = 66/74 (89%)
 Frame = +2

Query: 2   VLSSDGSVVGFQPTSRLAVNHWASNPLAKELYNGRKLTPGLIEPGLKIQQPDKVILVELL 181
           V SS+G +VGFQP SR+AVNHW+ NPLA+ELY G+KL+P +IEPGLK+  P+KVI+VELL
Sbjct: 532 VFSSEGKIVGFQPLSRVAVNHWSVNPLARELYGGKKLSPSIIEPGLKVSLPEKVIVVELL 591

Query: 182 MSVNPESWFALARP 223
           MS+NP+++FALARP
Sbjct: 592 MSINPDAYFALARP 605


>ref|NP_174175.2| uncharacterized protein [Arabidopsis thaliana]
           gi|28973742|gb|AAO64187.1| unknown protein [Arabidopsis
           thaliana] gi|30793961|gb|AAP40432.1| unknown protein
           [Arabidopsis thaliana] gi|110737261|dbj|BAF00578.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332192868|gb|AEE30989.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 614

 Score =  114 bits (285), Expect = 2e-23
 Identities = 53/75 (70%), Positives = 64/75 (85%)
 Frame = +2

Query: 2   VLSSDGSVVGFQPTSRLAVNHWASNPLAKELYNGRKLTPGLIEPGLKIQQPDKVILVELL 181
           VLSS+G ++GFQPTSR+AVNHWA+NPLA+ELY G+KL PGLIEPGLK   P KV+++ELL
Sbjct: 537 VLSSEGKIIGFQPTSRVAVNHWAANPLARELYGGKKLKPGLIEPGLKSHPPKKVVVLELL 596

Query: 182 MSVNPESWFALARPL 226
           MSVN +  FAL RPL
Sbjct: 597 MSVNSDRPFALVRPL 611


>ref|NP_973929.2| uncharacterized protein [Arabidopsis thaliana]
           gi|10764862|gb|AAF24552.2|AC007508_15 F1K23.23
           [Arabidopsis thaliana] gi|332192867|gb|AEE30988.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 613

 Score =  114 bits (285), Expect = 2e-23
 Identities = 53/75 (70%), Positives = 64/75 (85%)
 Frame = +2

Query: 2   VLSSDGSVVGFQPTSRLAVNHWASNPLAKELYNGRKLTPGLIEPGLKIQQPDKVILVELL 181
           VLSS+G ++GFQPTSR+AVNHWA+NPLA+ELY G+KL PGLIEPGLK   P KV+++ELL
Sbjct: 536 VLSSEGKIIGFQPTSRVAVNHWAANPLARELYGGKKLKPGLIEPGLKSHPPKKVVVLELL 595

Query: 182 MSVNPESWFALARPL 226
           MSVN +  FAL RPL
Sbjct: 596 MSVNSDRPFALVRPL 610


>ref|XP_002893534.1| hypothetical protein ARALYDRAFT_473074 [Arabidopsis lyrata subsp.
           lyrata] gi|297339376|gb|EFH69793.1| hypothetical protein
           ARALYDRAFT_473074 [Arabidopsis lyrata subsp. lyrata]
          Length = 616

 Score =  114 bits (285), Expect = 2e-23
 Identities = 53/75 (70%), Positives = 64/75 (85%)
 Frame = +2

Query: 2   VLSSDGSVVGFQPTSRLAVNHWASNPLAKELYNGRKLTPGLIEPGLKIQQPDKVILVELL 181
           VLS++G ++GFQPTSR+AVNHWA+NPLAKELY G+KL PGLIEPGLK   P KV+++ELL
Sbjct: 539 VLSAEGKIIGFQPTSRVAVNHWAANPLAKELYGGKKLKPGLIEPGLKSHPPKKVVVLELL 598

Query: 182 MSVNPESWFALARPL 226
           MSVN +  FAL RPL
Sbjct: 599 MSVNSDRPFALVRPL 613


>ref|XP_003541453.1| PREDICTED: uncharacterized protein LOC100785118 [Glycine max]
          Length = 603

 Score =  113 bits (282), Expect = 4e-23
 Identities = 51/73 (69%), Positives = 65/73 (89%)
 Frame = +2

Query: 2   VLSSDGSVVGFQPTSRLAVNHWASNPLAKELYNGRKLTPGLIEPGLKIQQPDKVILVELL 181
           V SS+  +VGFQP SR+AVNHWA+NPLA+ELY G+KL+P LIEPGLK+  P+KVI+VELL
Sbjct: 528 VFSSERKIVGFQPLSRVAVNHWAANPLARELYRGKKLSPSLIEPGLKVPLPEKVIVVELL 587

Query: 182 MSVNPESWFALAR 220
           MS+NP+++FALAR
Sbjct: 588 MSINPDAYFALAR 600


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