BLASTX nr result

ID: Coptis25_contig00013177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013177
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279766.1| PREDICTED: UPF0497 membrane protein 16 [Viti...   110   1e-22
ref|XP_002315238.1| predicted protein [Populus trichocarpa] gi|3...   108   5e-22
emb|CAN63416.1| hypothetical protein VITISV_007688 [Vitis vinifera]   108   5e-22
ref|XP_004167798.1| PREDICTED: CASP-like protein POPTRDRAFT_8338...    98   6e-19
ref|XP_004149352.1| PREDICTED: CASP-like protein POPTRDRAFT_8338...    98   6e-19

>ref|XP_002279766.1| PREDICTED: UPF0497 membrane protein 16 [Vitis vinifera]
           gi|226713187|sp|A7P0P3.1|CSPL3_VITVI RecName:
           Full=CASP-like protein VIT_19s0090g00570
           gi|297737447|emb|CBI26648.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/85 (63%), Positives = 61/85 (71%)
 Frame = +1

Query: 1   QVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFF 180
           Q++ YLMVTSGAAV+EILYLAY GDR VSWSEACSS+GRFCSR             CF  
Sbjct: 99  QIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACSSYGRFCSRVNLALALHALALCCFLV 158

Query: 181 LSLISAYRFFSKFEPPVPRKGVHED 255
           L++ISAYR FS FEPPV  K V E+
Sbjct: 159 LAVISAYRVFSMFEPPVSSKEVEEE 183


>ref|XP_002315238.1| predicted protein [Populus trichocarpa]
           gi|341958558|sp|B9HTL5.1|CSPLC_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_833824
           gi|222864278|gb|EEF01409.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   QVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFF 180
           Q+V YLMVTSG AV+EILYLAYNGDR+VSWSEAC+S+G+FC R            +CF  
Sbjct: 83  QIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYGKFCYRMKLAVILHALALSCFII 142

Query: 181 LSLISAYRFFSKFEPP-VPRKGVHED 255
           L++ISAYR FS FEPP VP K V ED
Sbjct: 143 LAVISAYRAFSIFEPPLVPSKVVEED 168


>emb|CAN63416.1| hypothetical protein VITISV_007688 [Vitis vinifera]
          Length = 186

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/85 (62%), Positives = 60/85 (70%)
 Frame = +1

Query: 1   QVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFF 180
           Q++ YLMVTSGAAV+EILYLAY GDR VSWSEACS +GRFCSR             CF  
Sbjct: 99  QIMAYLMVTSGAAVLEILYLAYKGDRGVSWSEACSXYGRFCSRVNLALALHALALCCFLV 158

Query: 181 LSLISAYRFFSKFEPPVPRKGVHED 255
           L++ISAYR FS FEPPV  K V E+
Sbjct: 159 LAVISAYRVFSMFEPPVSSKEVEEE 183


>ref|XP_004167798.1| PREDICTED: CASP-like protein POPTRDRAFT_833824-like [Cucumis
           sativus]
          Length = 171

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = +1

Query: 1   QVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFF 180
           Q+V YLMV SGAAV EILY+AYNGDR+VSWSEACSS+G+FC+              CFF 
Sbjct: 91  QIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFP 150

Query: 181 LSLISAYRFFSKFEPPV 231
           L++ISA+R FS F PP+
Sbjct: 151 LAIISAFRAFSVFPPPL 167


>ref|XP_004149352.1| PREDICTED: CASP-like protein POPTRDRAFT_833824-like [Cucumis
           sativus]
          Length = 171

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = +1

Query: 1   QVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFF 180
           Q+V YLMV SGAAV EILY+AYNGDR+VSWSEACSS+G+FC+              CFF 
Sbjct: 91  QIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYGKFCNNMKMALIFQALGFACFFP 150

Query: 181 LSLISAYRFFSKFEPPV 231
           L++ISA+R FS F PP+
Sbjct: 151 LAIISAFRAFSVFPPPL 167


Top