BLASTX nr result

ID: Coptis25_contig00013168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013168
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244...   392   e-106
ref|XP_002526559.1| transcription factor, putative [Ricinus comm...   364   3e-98
ref|XP_003554298.1| PREDICTED: uncharacterized protein LOC100810...   323   5e-86
gb|AFK35281.1| unknown [Medicago truncatula]                          318   2e-84
ref|XP_003625354.1| Two-component response regulator ARR [Medica...   317   4e-84

>ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244545 [Vitis vinifera]
          Length = 517

 Score =  392 bits (1007), Expect = e-106
 Identities = 209/360 (58%), Positives = 257/360 (71%), Gaps = 4/360 (1%)
 Frame = +1

Query: 310  LSIQGSGKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNSMLPHST 489
            LSI+GSG KQL ++G S A+SSS+ V P S E+ HP+ PDSQQV + RE+MT     H++
Sbjct: 7    LSIRGSGSKQLNNLGASGALSSSLSVLPTSLEETHPKLPDSQQVYVGREIMTRPQAMHAS 66

Query: 490  LLASNSGVVGQIYSLASGAS-DLHFXXXXXXXXXXXDAPLISQFPNNGTTNSLNPCSYSE 666
             L SNSG VG I+S +SG S DLHF            AP ISQ  +NGT+  L   S+S 
Sbjct: 67   PLPSNSGAVGHIFSSSSGYSTDLHFSSVSPHERHSRSAPFISQSSSNGTSLPLAHSSHSG 126

Query: 667  FFESTELNHYSKENNDVSWCEDALEGLLDFPENVPVQNRQMEIIGTGGLTTEEHTNQS-- 840
              +ST  +HY +ENN+ SWC D+L G LDFP N PVQ+ Q+E     G+   E  ++   
Sbjct: 127  QLQSTASSHYIEENNNASWCTDSLSGFLDFPVNTPVQSSQIESRSASGVIASEDLSKRHD 186

Query: 841  -DEWTDQLISNVEPLDADWSEIYAATKANDTEQKPAIQEPNASLNPSLHQPQIHHQLPAD 1017
              EW DQLI++ + L+++W+E    T   D E K A Q P  S N S +QPQ+H QL A 
Sbjct: 187  WQEWADQLITDDDALNSNWNEFLVDTNVADVEPKMAYQVPKPSSNFSANQPQVHPQLSAP 246

Query: 1018 SGESNAIAGPTSSANGASSKPRMRWTTELHESFVEAVNKLGGSERATPKGVLKLMKVEGL 1197
            SGE + +  P+SS N A +KPRMRWT ELHE+FVEAVN+LGGSERATPKGVLKLMKVEGL
Sbjct: 247  SGEVHNVVTPSSSVNTAPTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGL 306

Query: 1198 TIYHVKSHLQKYRTARYRPDSSEGNSEKKVSSIEDISSLDLKTGIEITEALRLQMEVQKR 1377
            TIYHVKSHLQKYRTARYRP+SSEG+SEK+++SIE++SSLDLKTGIEITEALRLQMEVQKR
Sbjct: 307  TIYHVKSHLQKYRTARYRPESSEGSSEKRLTSIEEMSSLDLKTGIEITEALRLQMEVQKR 366


>ref|XP_002526559.1| transcription factor, putative [Ricinus communis]
            gi|223534120|gb|EEF35837.1| transcription factor,
            putative [Ricinus communis]
          Length = 491

 Score =  364 bits (935), Expect = 3e-98
 Identities = 199/366 (54%), Positives = 258/366 (70%), Gaps = 5/366 (1%)
 Frame = +1

Query: 295  MEVRP-LSIQGSGKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNS 471
            ME RP LSIQ SG KQL+++G+S A+SSS PV P S+E+ +P+  D+QQV++E+ +MT  
Sbjct: 1    MEARPTLSIQRSGVKQLSNLGVSGALSSSYPVLPTSREETYPKLSDAQQVAMEKGLMTRP 60

Query: 472  MLPHSTLLASNSGVVGQIYSLASGAS-DLHFXXXXXXXXXXXDAPLISQFPNNGTTNSLN 648
            ++ H+  L SN+GVVG ++S ++G S DL +           + P ISQ P N    +L 
Sbjct: 61   LV-HTNHLPSNNGVVGHLFSSSAGFSTDLQYSSVSPQEKHSRNTPFISQSPTNVAALTLP 119

Query: 649  PCSYSEFFESTELNHYSKENNDVSWCEDALEGLLDFPENVPVQNRQMEIIG-TGGLTTEE 825
               +S   + T  + Y KEN+  SWC ++L G LDFP N  VQN Q+E    TG +T+EE
Sbjct: 120  QSPHSGLLQCTASSQYDKENS-ASWCPESLPGFLDFPVNSHVQNNQIESNSCTGAITSEE 178

Query: 826  HTNQSD--EWTDQLISNVEPLDADWSEIYAATKANDTEQKPAIQEPNASLNPSLHQPQIH 999
             + ++D  EW DQLI++ + L ++W+++     A + E K A Q      + S HQPQ+H
Sbjct: 179  FSKRNDWQEWADQLITDDDALTSNWNDLLVDNSAPEMEPKMAYQVSKPPSDISAHQPQVH 238

Query: 1000 HQLPADSGESNAIAGPTSSANGASSKPRMRWTTELHESFVEAVNKLGGSERATPKGVLKL 1179
             QLPA S +   +  PTSS N A SKPRMRWT ELHE+FV+AVN+LGGSERATPKGVLKL
Sbjct: 239  QQLPAPSIDIRPVLTPTSSVNTAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKL 298

Query: 1180 MKVEGLTIYHVKSHLQKYRTARYRPDSSEGNSEKKVSSIEDISSLDLKTGIEITEALRLQ 1359
            MKVEGLTIYHVKSHLQKYRTARYRPDS EG+SE+K++ +E+ISSLDLKTGIEITEALRLQ
Sbjct: 299  MKVEGLTIYHVKSHLQKYRTARYRPDSLEGSSEQKLTPLEEISSLDLKTGIEITEALRLQ 358

Query: 1360 MEVQKR 1377
            MEVQKR
Sbjct: 359  MEVQKR 364


>ref|XP_003554298.1| PREDICTED: uncharacterized protein LOC100810560 [Glycine max]
          Length = 484

 Score =  323 bits (829), Expect = 5e-86
 Identities = 191/365 (52%), Positives = 241/365 (66%), Gaps = 4/365 (1%)
 Frame = +1

Query: 295  MEVRP-LSIQGSGKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNS 471
            ME R   SI  S  KQL ++G+S A  SS+P  P   E+ +P+  DS+ V +E+E+ T  
Sbjct: 1    MEARSAFSIDRSNAKQLNNMGMSEAFPSSLPALPSPLEETYPKLSDSKPVFMEKELKTKP 60

Query: 472  MLPHSTLLASNSGVVGQIYSLASGAS-DLHFXXXXXXXXXXXDAPLISQFPNNGTTNSLN 648
               HS+ L S SG VG ++S + G S DLH            +   ISQ  +N  +  L+
Sbjct: 61   YT-HSSHLTS-SGAVGHMFSSSPGYSTDLHHSSFSSHEKQPRNTHFISQSLSNMASLPLS 118

Query: 649  PCSYSEFFESTELNHYSKENNDVSWCEDALEGLLDFPENVPVQNRQMEIIGTGGLTTEEH 828
              S SE   ST    YS   N VSW  D+L   LDFP N  + N Q+E      + TEE+
Sbjct: 119  YSSNSEPIPSTTSTPYSN-GNSVSWHTDSLPSFLDFPANTSIGNSQVESSDCNIMATEEY 177

Query: 829  TNQSD--EWTDQLISNVEPLDADWSEIYAATKANDTEQKPAIQEPNASLNPSLHQPQIHH 1002
            + ++D  EW DQLIS+V+PL ++W+++ A    N  + +P + + ++ L P  HQ Q H 
Sbjct: 178  SKRNDWQEWADQLISDVDPLTSNWNDLLAD---NIQDLEPKVAKSSSQL-PIGHQSQSHQ 233

Query: 1003 QLPADSGESNAIAGPTSSANGASSKPRMRWTTELHESFVEAVNKLGGSERATPKGVLKLM 1182
            QLPA SGE+     PTSS N A +KPRMRWT ELHE+FVEAVN+LGGSERATPKGVLKLM
Sbjct: 234  QLPASSGENRVGVAPTSSTNSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLM 293

Query: 1183 KVEGLTIYHVKSHLQKYRTARYRPDSSEGNSEKKVSSIEDISSLDLKTGIEITEALRLQM 1362
            KV+GLTIYHVKSHLQKYRTARYRP+SSEG +EKK+S IE++SSLDLKTGIEITEALRLQM
Sbjct: 294  KVDGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEEMSSLDLKTGIEITEALRLQM 353

Query: 1363 EVQKR 1377
            EVQKR
Sbjct: 354  EVQKR 358


>gb|AFK35281.1| unknown [Medicago truncatula]
          Length = 489

 Score =  318 bits (816), Expect = 2e-84
 Identities = 189/367 (51%), Positives = 243/367 (66%), Gaps = 6/367 (1%)
 Frame = +1

Query: 295  MEVRP-LSIQGSGKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNS 471
            ME RP  SI+ S  +QL ++G+S A+ SS+ V+P   E+ +P++ DSQ   +E+++ T +
Sbjct: 1    MEARPAFSIERSSSQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKT 60

Query: 472  MLPHSTLLASNSGVVGQIYSLASG-ASDLHFXXXXXXXXXXXDAPLISQFPNNGTTNSLN 648
               HS+ ++S SG VG ++S + G  +DLH             A  ISQ  +N  +  L 
Sbjct: 61   F-NHSSHISS-SGAVGHMFSSSPGYLTDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLP 118

Query: 649  PCSYSEFFESTELNHYSKENNDVSWCEDALEGLLDFPENVPVQNRQMEIIGTGGLTTEEH 828
              S +    ST   HYS   N  SW  D L   LDF  N  + N Q+E      + TEE 
Sbjct: 119  YSSNNGPVPSTTSTHYSN-GNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEF 177

Query: 829  TNQSD--EWTDQLISNVEPLDADWSEIYAATKANDTEQKP--AIQEPNASLNPSLHQPQI 996
            + ++D  EW DQLIS+ + L ++W+++ A     D E K   +I +P++   P+ HQ Q 
Sbjct: 178  SKRNDWQEWADQLISDDDTLTSNWNDLLA-DNIQDLEPKAVESISKPSSQF-PAGHQSQD 235

Query: 997  HHQLPADSGESNAIAGPTSSANGASSKPRMRWTTELHESFVEAVNKLGGSERATPKGVLK 1176
            H QLPA SGE++    P+SSAN A++KPRMRWT ELHE+FVEAVN+LGGSERATPKGVLK
Sbjct: 236  HQQLPALSGENHVGVAPSSSANSATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLK 295

Query: 1177 LMKVEGLTIYHVKSHLQKYRTARYRPDSSEGNSEKKVSSIEDISSLDLKTGIEITEALRL 1356
            LMKVEGLTIYHVKSHLQKYRTARYRP+SSEG  EKK+S IEDISSLDLKTGIEITEALRL
Sbjct: 296  LMKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRL 355

Query: 1357 QMEVQKR 1377
            QMEVQKR
Sbjct: 356  QMEVQKR 362


>ref|XP_003625354.1| Two-component response regulator ARR [Medicago truncatula]
            gi|355500369|gb|AES81572.1| Two-component response
            regulator ARR [Medicago truncatula]
          Length = 489

 Score =  317 bits (813), Expect = 4e-84
 Identities = 189/366 (51%), Positives = 240/366 (65%), Gaps = 5/366 (1%)
 Frame = +1

Query: 295  MEVRP-LSIQGSGKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNS 471
            ME RP  SI+ S  +QL ++G+S A+ SS+ V+P   E+ +P++ DSQ   +E+++ T +
Sbjct: 1    MEARPAFSIERSSSQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKT 60

Query: 472  MLPHSTLLASNSGVVGQIYSLASGAS-DLHFXXXXXXXXXXXDAPLISQFPNNGTTNSLN 648
               HS+ ++S SG VG ++S + G S DLH             A  ISQ  +N  +  L 
Sbjct: 61   F-NHSSHISS-SGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLP 118

Query: 649  PCSYSEFFESTELNHYSKENNDVSWCEDALEGLLDFPENVPVQNRQMEIIGTGGLTTEEH 828
              S +    ST   HYS   N  SW  D L   LDF  N  + N Q+E      + TEE 
Sbjct: 119  YSSNNGPVPSTTSTHYSN-GNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEF 177

Query: 829  TNQSD--EWTDQLISNVEPLDADWSEIYAATKANDTEQKPAIQ-EPNASLNPSLHQPQIH 999
            + ++D  EW DQLIS+ + L ++W+++ A     D E K       ++S  P+ HQ Q H
Sbjct: 178  SKRNDWQEWADQLISDDDTLTSNWNDLLA-DNIQDLEPKAVESISKSSSQFPAGHQSQDH 236

Query: 1000 HQLPADSGESNAIAGPTSSANGASSKPRMRWTTELHESFVEAVNKLGGSERATPKGVLKL 1179
             QLPA SGE++    P+SSAN A++KPRMRWT ELHE+FVEAVN+LGGSERATPKGVLKL
Sbjct: 237  QQLPALSGENHVGVAPSSSANSATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKL 296

Query: 1180 MKVEGLTIYHVKSHLQKYRTARYRPDSSEGNSEKKVSSIEDISSLDLKTGIEITEALRLQ 1359
            MKVEGLTIYHVKSHLQKYRTARYRP+SSEG  EKK+S IEDISSLDLKTGIEITEALRLQ
Sbjct: 297  MKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQ 356

Query: 1360 MEVQKR 1377
            MEVQKR
Sbjct: 357  MEVQKR 362


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