BLASTX nr result

ID: Coptis25_contig00013136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013136
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517178.1| PREDICTED: protein AF-9 homolog [Glycine max]     408   e-111
ref|XP_002275472.1| PREDICTED: protein AF-9 homolog [Vitis vinif...   404   e-110
ref|XP_002269156.2| PREDICTED: protein AF-9 homolog [Vitis vinif...   396   e-108
ref|XP_003537632.1| PREDICTED: protein AF-9 homolog [Glycine max]     395   e-108
gb|ACU19426.1| unknown [Glycine max]                                  393   e-107

>ref|XP_003517178.1| PREDICTED: protein AF-9 homolog [Glycine max]
          Length = 279

 Score =  408 bits (1048), Expect = e-111
 Identities = 203/275 (73%), Positives = 228/275 (82%), Gaps = 1/275 (0%)
 Frame = +1

Query: 106 LTTTMPLTAGRKHGSDLSDG-SVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGT 282
           ++ + PL   R+      DG S  KL R K   P+E+ +KK  NR++KDVEI VPIVYGT
Sbjct: 1   MSNSNPLPLKRQGEQSSDDGASAIKLSRLKIAIPSEDSDKKNANRRLKDVEICVPIVYGT 60

Query: 283 ISFWLGKKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSE 462
           I+F+LG+KASE  SHKWTVYVR A+NEDLGVV+KR VFQLHPSFNNPTRVVESPPFELSE
Sbjct: 61  IAFYLGRKASESQSHKWTVYVRGASNEDLGVVVKRVVFQLHPSFNNPTRVVESPPFELSE 120

Query: 463 SGWGEFEIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPS 642
            GWGEFEIAI+L+FH DVC+KQLDLYHHLKLYPE+ESGPQ+TKKPVVVESY+EIVF EPS
Sbjct: 121 CGWGEFEIAITLYFHPDVCEKQLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPEPS 180

Query: 643 EGFFARVQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELL 822
           EGF ARVQNHPAVNVPRLPA  +L     ID VND+ RGDTKDHPL QWFMNFSEADELL
Sbjct: 181 EGFLARVQNHPAVNVPRLPAGLNLPSPVPIDTVNDKERGDTKDHPLTQWFMNFSEADELL 240

Query: 823 KLAAARQQIQTHIVKLRRQLSLLDAQPQQSNPISG 927
           KLAAARQQ+Q HIVKLRRQLSL++  PQ S P SG
Sbjct: 241 KLAAARQQVQAHIVKLRRQLSLVEGLPQLSKPPSG 275


>ref|XP_002275472.1| PREDICTED: protein AF-9 homolog [Vitis vinifera]
          Length = 273

 Score =  404 bits (1037), Expect = e-110
 Identities = 197/267 (73%), Positives = 227/267 (85%), Gaps = 2/267 (0%)
 Frame = +1

Query: 136 RKHGSDLSD--GSVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGTISFWLGKKA 309
           +KHG D  D  G   K QR+K  +  E+ EKK +N+++KDVEISVPIVYG I+FWLGKKA
Sbjct: 7   KKHGPDQPDIVGPTPKSQRSKMVKSTEDGEKKNLNKRLKDVEISVPIVYGNIAFWLGKKA 66

Query: 310 SEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSESGWGEFEIA 489
           SEY SHKWTVYVRS TNEDLGVVIKRAVFQLH SFNNPTRVVESPPFELSE+GWGEFEIA
Sbjct: 67  SEYQSHKWTVYVRSPTNEDLGVVIKRAVFQLHSSFNNPTRVVESPPFELSEAGWGEFEIA 126

Query: 490 ISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPSEGFFARVQN 669
           I+L+F +DVCDK L+LYHHLKLYPE+ESGP + KKPVVVESYDEIVFSEPSEGFFARVQN
Sbjct: 127 ITLYFQSDVCDKPLNLYHHLKLYPEDESGPMSAKKPVVVESYDEIVFSEPSEGFFARVQN 186

Query: 670 HPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELLKLAAARQQI 849
           HPAV VPRLPA FSL P   +++VN+++R D+KD+PL QWF NFSEADELL+LAAARQQ+
Sbjct: 187 HPAVIVPRLPAGFSLPPPVPLEDVNEKKRFDSKDNPLNQWFKNFSEADELLQLAAARQQV 246

Query: 850 QTHIVKLRRQLSLLDAQPQQSNPISGE 930
           Q HI KLRRQ+S++D Q QQ  P S +
Sbjct: 247 QAHIAKLRRQISVIDGQHQQLKPTSDQ 273


>ref|XP_002269156.2| PREDICTED: protein AF-9 homolog [Vitis vinifera]
           gi|297735026|emb|CBI17388.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score =  396 bits (1017), Expect = e-108
 Identities = 192/270 (71%), Positives = 228/270 (84%)
 Frame = +1

Query: 121 PLTAGRKHGSDLSDGSVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGTISFWLG 300
           P  +  ++ SD+S+ ++ KLQR    R  ++ EKKI NR++KDVEI VPI YGTISFWLG
Sbjct: 5   PSLSSPRNQSDVSESAI-KLQRLVMGRSTDDPEKKIPNRRLKDVEICVPISYGTISFWLG 63

Query: 301 KKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSESGWGEF 480
           +KASE  SHKWTVYVR ATNEDLGVVI+RAVFQLHPSFNNP RVV+SPPFELSESGWGEF
Sbjct: 64  RKASESQSHKWTVYVRGATNEDLGVVIRRAVFQLHPSFNNPMRVVDSPPFELSESGWGEF 123

Query: 481 EIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPSEGFFAR 660
           EIAI+L+FH+DVCDKQLDL+HHLKLYPE+ESGPQ+TKKPVVVESY+EIVF +P + FFAR
Sbjct: 124 EIAITLYFHSDVCDKQLDLFHHLKLYPEDESGPQSTKKPVVVESYNEIVFPDPLDSFFAR 183

Query: 661 VQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELLKLAAAR 840
           V++HPAV VPRLPA+F+L     I+N  +++RGDTKDHPL QWF+NFSEADELLKLA AR
Sbjct: 184 VKDHPAVIVPRLPASFNLPAPVPIENAKEKKRGDTKDHPLNQWFVNFSEADELLKLATAR 243

Query: 841 QQIQTHIVKLRRQLSLLDAQPQQSNPISGE 930
           QQ+Q HIVKLRRQLS++D  P+   P S E
Sbjct: 244 QQVQAHIVKLRRQLSVIDGLPRPLKPASDE 273


>ref|XP_003537632.1| PREDICTED: protein AF-9 homolog [Glycine max]
          Length = 279

 Score =  395 bits (1016), Expect = e-108
 Identities = 198/275 (72%), Positives = 225/275 (81%), Gaps = 1/275 (0%)
 Frame = +1

Query: 106 LTTTMPLTAGRKHGSDLSDG-SVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGT 282
           ++ + PL   R+      DG S  K  R K   P+E+ +KK  NR++KDVEI VPIVYGT
Sbjct: 1   MSNSNPLPLKRQGEQSSDDGASAIKPSRLKIAIPSEDSDKKNANRRLKDVEICVPIVYGT 60

Query: 283 ISFWLGKKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSE 462
           I+F+LG+KASE  SHKWTVYVR A+NEDLGVV+KR VFQLHPSFNNPTRVVESPPFELSE
Sbjct: 61  IAFYLGRKASESQSHKWTVYVRGASNEDLGVVVKRVVFQLHPSFNNPTRVVESPPFELSE 120

Query: 463 SGWGEFEIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPS 642
            GWGEFEIAI+L+FH+DVC+KQLDLYHHLKLYPE+ESGPQ+TKKPVVVESY+EIVF EPS
Sbjct: 121 CGWGEFEIAITLYFHSDVCEKQLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPEPS 180

Query: 643 EGFFARVQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELL 822
           E F ARVQNHPAVNVPRLPA  +L      D VND+ RGDTKDH L QWF+NFSEADELL
Sbjct: 181 EVFLARVQNHPAVNVPRLPAGLNLPSPVPSDTVNDKERGDTKDHLLTQWFLNFSEADELL 240

Query: 823 KLAAARQQIQTHIVKLRRQLSLLDAQPQQSNPISG 927
           KLAAARQQ+Q HIVKLRRQLSL++  PQ S P SG
Sbjct: 241 KLAAARQQVQAHIVKLRRQLSLVEGLPQLSKPPSG 275


>gb|ACU19426.1| unknown [Glycine max]
          Length = 279

 Score =  393 bits (1010), Expect = e-107
 Identities = 197/275 (71%), Positives = 224/275 (81%), Gaps = 1/275 (0%)
 Frame = +1

Query: 106 LTTTMPLTAGRKHGSDLSDG-SVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGT 282
           ++ + PL   R+      DG S  K  R K   P+E+ +KK  NR++KDVEI VPIVYGT
Sbjct: 1   MSNSNPLPLKRQGEQSSDDGASAIKPSRLKIAIPSEDSDKKNANRRLKDVEICVPIVYGT 60

Query: 283 ISFWLGKKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSE 462
           I+F+LG+KASE  SHKWTVYVR A+NEDLGVV+KR VFQLHPSFNNPTRVVESPPFELSE
Sbjct: 61  IAFYLGRKASESQSHKWTVYVRGASNEDLGVVVKRVVFQLHPSFNNPTRVVESPPFELSE 120

Query: 463 SGWGEFEIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPS 642
            GWGEFEIAI+L+FH+DVC+KQLDLYHHLKLYPE+ESGPQ+TKKPVVVESY+EIVF EPS
Sbjct: 121 CGWGEFEIAITLYFHSDVCEKQLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPEPS 180

Query: 643 EGFFARVQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELL 822
           E F ARVQNHPAVNVPRLPA  +L      D VND+ RGD KDH L QWF+NFSEADELL
Sbjct: 181 EVFLARVQNHPAVNVPRLPAGLNLPSPVPSDTVNDKERGDPKDHLLTQWFLNFSEADELL 240

Query: 823 KLAAARQQIQTHIVKLRRQLSLLDAQPQQSNPISG 927
           KLAAARQQ+Q HIVKLRRQLSL++  PQ S P SG
Sbjct: 241 KLAAARQQVQAHIVKLRRQLSLVEGLPQLSKPPSG 275


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