BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013134
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
emb|CBI28050.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus...    92   4e-17
ref|XP_003630782.1| Pentatricopeptide repeat-containing protein ...    76   3e-12

>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 816

 Score =  120 bits (302), Expect = 9e-26
 Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 5/136 (3%)
 Frame = -3

Query: 503  FNMPPPCSVVIQESEKGHWHIPVELEDGSERERTWLCVTRTDAEGHKSAMRQKDHHSKEG 324
            F+MPPPCSV+IQESE GHWHIPV  E  SE ERTWLCVTR +++  K +   ++  S+  
Sbjct: 682  FHMPPPCSVIIQESENGHWHIPVASEHDSEGERTWLCVTRANSQMAKQSPSPRNKESQYP 741

Query: 323  C-----ANADAQSRSSMKLPKHGIGGNILKTNQHSMEIYRNLESILSDSVIHNSQTLVFD 159
            C       +D Q+    +L       N  K+     EIYRNL +ILS S+     T++ +
Sbjct: 742  CYDKRRVRSDTQTEIHKELSSSN-HRNQEKSKAPPQEIYRNLRNILSASIFPTHSTVLSE 800

Query: 158  IEEAEKLGGCIIDFQI 111
            IE AEKLG CIIDFQI
Sbjct: 801  IEAAEKLGNCIIDFQI 816


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  120 bits (302), Expect = 9e-26
 Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 5/136 (3%)
 Frame = -3

Query: 503  FNMPPPCSVVIQESEKGHWHIPVELEDGSERERTWLCVTRTDAEGHKSAMRQKDHHSKEG 324
            F+MPPPCSV+IQESE GHWHIPV  E  SE ERTWLCVTR +++  K +   ++  S+  
Sbjct: 617  FHMPPPCSVIIQESENGHWHIPVASEHDSEGERTWLCVTRANSQMAKQSPSPRNKESQYP 676

Query: 323  C-----ANADAQSRSSMKLPKHGIGGNILKTNQHSMEIYRNLESILSDSVIHNSQTLVFD 159
            C       +D Q+    +L       N  K+     EIYRNL +ILS S+     T++ +
Sbjct: 677  CYDKRRVRSDTQTEIHKELSSSN-HRNQEKSKAPPQEIYRNLRNILSASIFPTHSTVLSE 735

Query: 158  IEEAEKLGGCIIDFQI 111
            IE AEKLG CIIDFQI
Sbjct: 736  IEAAEKLGNCIIDFQI 751


>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 3/134 (2%)
 Frame = -3

Query: 503 FNMPPPCSVVIQESEKGHWHIPVELEDGSERERTWLCVTRT--DAEGHKSAMRQKDHHSK 330
           F+MPPPCSVVIQESE+GHWHIP++ E   E ER WLC+TR   D     S+  +     +
Sbjct: 591 FHMPPPCSVVIQESEEGHWHIPIDAELNDESERRWLCITRAKLDVVSKDSSTSKDSKPLQ 650

Query: 329 EGCANADAQSRSSMKLPKHGIGGNILKTNQHSMEIYRNLESILSDSVIHN-SQTLVFDIE 153
           +G     A   +S K  +H    N  +  +   E+Y+N+  I  +SV  + + +++ DIE
Sbjct: 651 KGECARSATRNASAKESQHQNLVNHKEKKETPQELYKNVRDIFLESVSSDKNNSILSDIE 710

Query: 152 EAEKLGGCIIDFQI 111
            AE +GGC IDFQI
Sbjct: 711 AAELIGGCTIDFQI 724


>ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
            gi|223546737|gb|EEF48235.1| multidrug resistance pump,
            putative [Ricinus communis]
          Length = 745

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
 Frame = -3

Query: 503  FNMPPPCSVVIQESEKGHWHIPVELEDGSERERTWLCVTRTDAE-GHKSAMRQKDHHS-- 333
            F+MPP  SVVIQESE GHWHIP+  +   E ER WLC+TR       K ++  K   S  
Sbjct: 612  FHMPPSFSVVIQESENGHWHIPIASDTDYEPERAWLCITRAKLPLPRKDSITIKPEESQF 671

Query: 332  -KEGCANADAQSRSSMKLPKHGIGGNILKTNQHSMEIYRNLESILSDSVIHNSQTLVFDI 156
             K     A   +++ +K  K G   +    +    ++Y+NL +ILS S   + +T++ +I
Sbjct: 672  VKRSSGQAKLPTKTRVK-AKQGTLNHGSDEDNSPEQVYKNLRNILSASGFTDHRTVLSEI 730

Query: 155  EEAEKLGGCIIDFQI 111
            E AEKLG  +IDFQI
Sbjct: 731  EAAEKLGDSVIDFQI 745


>ref|XP_003630782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524804|gb|AET05258.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 668

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -3

Query: 506 EFNMPPPCSVVIQESEKGHWHIPVELEDGSERERTWLCVTRT--DAEGHKSAMRQKDHHS 333
           EF MPPPCSVVIQESE+GHWHIP+E E   E ER WLC+TR   D     S+   KD   
Sbjct: 566 EFYMPPPCSVVIQESEEGHWHIPIEAELNDEAERRWLCITRAKLDMVSGDSSTTSKDEKP 625

Query: 332 KEGCANADAQSR 297
            +    A + +R
Sbjct: 626 LQNGEQAKSVTR 637