BLASTX nr result

ID: Coptis25_contig00013107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013107
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613024.1| hypothetical protein MTR_5g031820 [Medicago ...   141   2e-31
ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]...   139   5e-31
ref|XP_003613983.1| hypothetical protein MTR_5g043380 [Medicago ...   137   3e-30
ref|XP_003614149.1| hypothetical protein MTR_5g045440 [Medicago ...   136   4e-30
ref|XP_003620586.1| hypothetical protein MTR_6g087240 [Medicago ...   134   2e-29

>ref|XP_003613024.1| hypothetical protein MTR_5g031820 [Medicago truncatula]
           gi|355514359|gb|AES95982.1| hypothetical protein
           MTR_5g031820 [Medicago truncatula]
          Length = 664

 Score =  141 bits (355), Expect = 2e-31
 Identities = 82/216 (37%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
 Frame = -3

Query: 623 TSVKFSDLPSPGHKGEYPYTKISEVAYERGS------LLARFDLNK----MSIEELRSAA 474
           T +     PSP  KG     KI +  Y +G       L AR  LNK     S  +L    
Sbjct: 53  TVIDDKPFPSPIIKGGAFSIKICQEEYRKGVEDCRKVLRARLTLNKGDKPYSACDLSIKI 112

Query: 473 A*SWKPSGEWVITPIGKGYMYIRFDNATDFNNVWSGGPWKFEGQILRLSKWEKKFCPETQ 294
             +WK   EW + P+GKGY    FD+A D   +W  G    +  +LR S+W K F   TQ
Sbjct: 113 DKTWKTMAEWKMVPLGKGYYDFHFDSAEDLKKIWVVGTVNLKPGLLRFSQWTKDFKILTQ 172

Query: 293 KQTHASVWIKFLGLPMEYWDKVTIMSRARSVGYPIQVDENTMRRNYGYYASCQVDVDPSK 114
           KQTHAS+WI+ + LP EYW + T+M  A +VG PI +D  T  R++G+YA   VD+D SK
Sbjct: 173 KQTHASLWIRLVELPQEYWRERTLMEIASAVGTPIFIDGPTRNRSFGHYARILVDIDLSK 232

Query: 113 NIPEQVFVEAKDNEFWQTIVVGKLPKFCNHYKIVGH 6
              ++V VE     F   +   + P FC+H   +GH
Sbjct: 233 KAYDEVLVERDGFAFMVEVQYERRPLFCHHCYSIGH 268


>ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]
            gi|355521859|gb|AET02313.1| NBS resistance protein
            [Medicago truncatula]
          Length = 1731

 Score =  139 bits (351), Expect = 5e-31
 Identities = 77/211 (36%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
 Frame = -3

Query: 608  SDLPSPGHKGEYPYTKISEVAYERGS------LLARFDLNKMS----IEELRSAAA*SWK 459
            S  P+P  KG+    KI +  Y RG       L AR  LNK        +L +     WK
Sbjct: 1097 SPFPTPCIKGDALSIKICQEEYHRGLEDCKNVLRARLTLNKGDKPYFARDLSNKIGKVWK 1156

Query: 458  PSGEWVITPIGKGYMYIRFDNATDFNNVWSGGPWKFEGQILRLSKWEKKFCPETQKQTHA 279
             S  W + P+GKGY    FD+A D   +W+ G    +  +LR S+W K F    QKQTH 
Sbjct: 1157 TSAGWKMVPLGKGYYDFHFDSADDLRKIWAAGTVNLKPGLLRFSQWTKDFKYLAQKQTHV 1216

Query: 278  SVWIKFLGLPMEYWDKVTIMSRARSVGYPIQVDENTMRRNYGYYASCQVDVDPSKNIPEQ 99
            S+WI+ + LP EYW +  +   A +VG PI +D  T  R +G+YA   VD+D SK   ++
Sbjct: 1217 SLWIRLVELPQEYWRERILKEIASAVGTPIDIDGPTRNRTFGHYARILVDIDLSKRTFDE 1276

Query: 98   VFVEAKDNEFWQTIVVGKLPKFCNHYKIVGH 6
            + VE  D  F   +   + P FC+H   +GH
Sbjct: 1277 ILVERDDFAFKVEVQYERRPLFCHHCFAIGH 1307


>ref|XP_003613983.1| hypothetical protein MTR_5g043380 [Medicago truncatula]
           gi|355515318|gb|AES96941.1| hypothetical protein
           MTR_5g043380 [Medicago truncatula]
          Length = 593

 Score =  137 bits (344), Expect = 3e-30
 Identities = 77/209 (36%), Positives = 108/209 (51%), Gaps = 10/209 (4%)
 Frame = -3

Query: 602 LPSPGHKGEYPYTKISEVAYERG------SLLARFDLNK----MSIEELRSAAA*SWKPS 453
           LP+P  KGE    KI +  Y  G      +L  R  LNK     S  +L +     WK S
Sbjct: 52  LPTPCIKGEALSIKIFQDEYHIGVEECKNALRGRLTLNKGDKPYSARDLSTKIGKHWKTS 111

Query: 452 GEWVITPIGKGYMYIRFDNATDFNNVWSGGPWKFEGQILRLSKWEKKFCPETQKQTHASV 273
             W + P+GKGY    FD+A D   +W+ G    +  +LRLS+W K F   +QKQTH S+
Sbjct: 112 AAWKMAPLGKGYYDFHFDSADDLRKIWAAGTVNLKPGLLRLSQWTKDFKYLSQKQTHVSL 171

Query: 272 WIKFLGLPMEYWDKVTIMSRARSVGYPIQVDENTMRRNYGYYASCQVDVDPSKNIPEQVF 93
           WI+ + L  EYW + T+   A +VG PI +D  T  R +G+YA   VD+D SK   +++ 
Sbjct: 172 WIRLVELLQEYWRERTLKEIASAVGTPIDIDGLTRNRTFGHYAIILVDIDLSKRAYDEIL 231

Query: 92  VEAKDNEFWQTIVVGKLPKFCNHYKIVGH 6
           VE +   F       + P FC+H   +GH
Sbjct: 232 VEREGFAFKVEFQYERRPLFCHHCYSIGH 260


>ref|XP_003614149.1| hypothetical protein MTR_5g045440 [Medicago truncatula]
           gi|355515484|gb|AES97107.1| hypothetical protein
           MTR_5g045440 [Medicago truncatula]
          Length = 720

 Score =  136 bits (343), Expect = 4e-30
 Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 10/237 (4%)
 Frame = -3

Query: 686 RNSSGTDTFVNYANITKTKDSTSVKFSDLPSPGHKGEYPYTKISEVAYERG------SLL 525
           R  S      ++A I      TS    DLP P  +GE    KIS+  YE+G      +L 
Sbjct: 21  RAQSNPPVAASFAQILSASKPTSSN-DDLPQPSIRGETLSIKISQGMYEKGMAFCKRNLR 79

Query: 524 ARFDLNK----MSIEELRSAAA*SWKPSGEWVITPIGKGYMYIRFDNATDFNNVWSGGPW 357
            R  LNK     +  ++       WK SG W +  +G+GY    F +  D  +VW+ G  
Sbjct: 80  GRLVLNKGDKPYAKRDIELKLQKLWKTSGAWSLLSLGRGYYEFYFASEEDLRSVWAMGTV 139

Query: 356 KFEGQILRLSKWEKKFCPETQKQTHASVWIKFLGLPMEYWDKVTIMSRARSVGYPIQVDE 177
             +  +LRL +W K F   TQ+ THA VWI+ + LP EYW  +T+   +  +G P+ +D 
Sbjct: 140 NLKPGLLRLFEWSKDFNLYTQRNTHAQVWIRLMALPQEYWMDMTLREISSVIGTPVLIDN 199

Query: 176 NTMRRNYGYYASCQVDVDPSKNIPEQVFVEAKDNEFWQTIVVGKLPKFCNHYKIVGH 6
            T +R +G+YA   VD+D ++ +  ++ VE +   F   +V  ++P FC H + +GH
Sbjct: 200 ATSKRLFGHYARILVDMDFTRKLFYEIVVEREGFAFPVEVVYERMPDFCTHCQNIGH 256


>ref|XP_003620586.1| hypothetical protein MTR_6g087240 [Medicago truncatula]
           gi|357500705|ref|XP_003620641.1| hypothetical protein
           MTR_6g088090 [Medicago truncatula]
           gi|355495601|gb|AES76804.1| hypothetical protein
           MTR_6g087240 [Medicago truncatula]
           gi|355495656|gb|AES76859.1| hypothetical protein
           MTR_6g088090 [Medicago truncatula]
          Length = 679

 Score =  134 bits (337), Expect = 2e-29
 Identities = 75/207 (36%), Positives = 104/207 (50%), Gaps = 10/207 (4%)
 Frame = -3

Query: 596 SPGHKGEYPYTKISEVAYERGS------LLARFDLNKMS----IEELRSAAA*SWKPSGE 447
           SP  KG+    KI +  Y +G       L AR  LNK        +L      +WK    
Sbjct: 50  SPCIKGDALSIKICQEEYRKGVEDCQKVLRARLALNKGDKPYFARDLSIKIDKTWKTKAG 109

Query: 446 WVITPIGKGYMYIRFDNATDFNNVWSGGPWKFEGQILRLSKWEKKFCPETQKQTHASVWI 267
           W + P+GKGY    FD+A D   +W+      +  +LR S+W K F  + QKQTH S+WI
Sbjct: 110 WKMVPLGKGYYDFHFDSAEDLKKIWAADTINLKPGLLRFSQWTKDFKFQAQKQTHVSIWI 169

Query: 266 KFLGLPMEYWDKVTIMSRARSVGYPIQVDENTMRRNYGYYASCQVDVDPSKNIPEQVFVE 87
           + + LP EYW + T+   A +VG PI +D  T  R +G+YA   VD+D SK   ++V VE
Sbjct: 170 RLVELPQEYWRERTLKEIASAVGTPIDIDGPTRNRTFGHYARILVDIDLSKKAYDEVLVE 229

Query: 86  AKDNEFWQTIVVGKLPKFCNHYKIVGH 6
                F   I   + P FC+H   +GH
Sbjct: 230 RDGFAFMVEIQYERRPLFCHHCYSIGH 256


Top