BLASTX nr result

ID: Coptis25_contig00013106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013106
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326416.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-10
ref|XP_002534113.1| ATP-binding cassette transporter, putative [...    60   7e-10
ref|XP_002277172.2| PREDICTED: pleiotropic drug resistance prote...    60   4e-09
emb|CBI30263.3| unnamed protein product [Vitis vinifera]               60   4e-09
emb|CAN77838.1| hypothetical protein VITISV_025837 [Vitis vinifera]    60   5e-09

>ref|XP_002326416.1| predicted protein [Populus trichocarpa] gi|222833609|gb|EEE72086.1|
            predicted protein [Populus trichocarpa]
          Length = 1463

 Score = 58.9 bits (141), Expect(2) = 6e-10
 Identities = 25/37 (67%), Positives = 32/37 (86%)
 Frame = +3

Query: 831  QAIPGITEIKDGCNPATWMLEVSAASIEIQLDVDFAE 941
            +A+PG+ +I+D  NPATWMLE+SA S+E QLDVDFAE
Sbjct: 1110 EAVPGVPKIRDAYNPATWMLEISAPSMEAQLDVDFAE 1146



 Score = 32.0 bits (71), Expect(2) = 6e-10
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = +1

Query: 1057 YTNLSVGVHFRWNQELIEELSTPASGSKE 1143
            Y N S+   ++ NQE+I+ELSTPA GSK+
Sbjct: 1148 YANSSL---YQRNQEIIKELSTPAPGSKD 1173


>ref|XP_002534113.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223525836|gb|EEF28273.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1437

 Score = 60.1 bits (144), Expect(2) = 7e-10
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +3

Query: 831  QAIPGITEIKDGCNPATWMLEVSAASIEIQLDVDFAEV 944
            +AIPG+ +IKDG NPATWML++S +S+E QL+VDFAE+
Sbjct: 1085 EAIPGVPKIKDGYNPATWMLDISTSSMETQLNVDFAEI 1122



 Score = 30.4 bits (67), Expect(2) = 7e-10
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +1

Query: 1057 YTNLSVGVHFRWNQELIEELSTPASGSKE 1143
            Y N S+   ++ NQELI+ELS P SGSK+
Sbjct: 1123 YVNSSL---YQRNQELIKELSIPPSGSKD 1148


>ref|XP_002277172.2| PREDICTED: pleiotropic drug resistance protein 2 [Vitis vinifera]
          Length = 1434

 Score = 59.7 bits (143), Expect(2) = 4e-09
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +3

Query: 831  QAIPGITEIKDGCNPATWMLEVSAASIEIQLDVDFAEV 944
            +AIPG+ +IK+G NPATWML VSA+S+E Q++VDFAE+
Sbjct: 1082 EAIPGVPKIKEGSNPATWMLVVSASSVEAQMEVDFAEI 1119



 Score = 28.5 bits (62), Expect(2) = 4e-09
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 1057 YTNLSVGVHFRWNQELIEELSTPASGSKE 1143
            Y N S+   ++ NQELI+ELSTP   SK+
Sbjct: 1120 YANSSL---YQRNQELIKELSTPPPASKD 1145


>emb|CBI30263.3| unnamed protein product [Vitis vinifera]
          Length = 1357

 Score = 59.7 bits (143), Expect(2) = 4e-09
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +3

Query: 831  QAIPGITEIKDGCNPATWMLEVSAASIEIQLDVDFAEV 944
            +AIPG+ +IK+G NPATWML VSA+S+E Q++VDFAE+
Sbjct: 1005 EAIPGVPKIKEGSNPATWMLVVSASSVEAQMEVDFAEI 1042



 Score = 28.5 bits (62), Expect(2) = 4e-09
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 1057 YTNLSVGVHFRWNQELIEELSTPASGSKE 1143
            Y N S+   ++ NQELI+ELSTP   SK+
Sbjct: 1043 YANSSL---YQRNQELIKELSTPPPASKD 1068


>emb|CAN77838.1| hypothetical protein VITISV_025837 [Vitis vinifera]
          Length = 1456

 Score = 59.7 bits (143), Expect(2) = 5e-09
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +3

Query: 831  QAIPGITEIKDGCNPATWMLEVSAASIEIQLDVDFAEV 944
            +AIPG+ +IK+G NPATWML VSA+S+E Q++VDFAE+
Sbjct: 1104 EAIPGVPKIKEGSNPATWMLVVSASSVEAQMEVDFAEI 1141



 Score = 28.1 bits (61), Expect(2) = 5e-09
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +1

Query: 1057 YTNLSVGVHFRWNQELIEELSTPASGSKE 1143
            Y N S+   ++ NQELI+ELSTP   SK+
Sbjct: 1142 YANSSL---YQRNQELIKELSTPPPXSKD 1167


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