BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013104
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [V...   394   e-107
ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis ...   390   e-106
ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [C...   370   e-100
ref|XP_003624695.1| 50S ribosomal protein L25 [Medicago truncatu...   361   2e-97
gb|AFK35431.1| unknown [Medicago truncatula]                          360   6e-97

>ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
            gi|297735240|emb|CBI17602.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  394 bits (1012), Expect = e-107
 Identities = 202/253 (79%), Positives = 223/253 (88%), Gaps = 2/253 (0%)
 Frame = -3

Query: 1183 RPLLKKAIQLRFFSQAATAAVQE--LEIQPLTYLEGFPKPDPKHDETIIAIPRSISGKNI 1010
            R +L  A+ LR FSQ+A AAV +  LE  PLTYLEGFP+PDPK  E I AIPR+ISGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 1009 SAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRPD 830
            SAKERKVGRVPSI+FEQE G+ GGNKRLISVRTNQI+KLVNHLGRSFFLSRLF+LEV PD
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVGPD 126

Query: 829  FESDEIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKKG 650
            FES+E+IEK+RVLPRKLHLHAGTDAVLNVTF+RAPS ALLKVDVPLVFRGEDV PGLKKG
Sbjct: 127  FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 649  AYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCNV 470
            AYLNTI RTVKYLCPADI+PPYIDVDLSELD GQKIV GDL VHPALKLL+SK+E VC +
Sbjct: 187  AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 469  KGARVTTEPKKSK 431
             G RV ++ +KSK
Sbjct: 247  MGTRV-SDQRKSK 258


>ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
            gi|297742259|emb|CBI34408.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  390 bits (1002), Expect = e-106
 Identities = 200/253 (79%), Positives = 222/253 (87%), Gaps = 2/253 (0%)
 Frame = -3

Query: 1183 RPLLKKAIQLRFFSQAATAAVQE--LEIQPLTYLEGFPKPDPKHDETIIAIPRSISGKNI 1010
            R +L  A+ LR FSQ+A AAV +  LE  PLTYLEGFP+PDPK  E I AIPR+ISGKNI
Sbjct: 7    RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 1009 SAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRPD 830
            SAKERKVGRVPSI+FEQE G+ GGNKRLISV+TNQI+KLVNHLGRSFFLSRLF+LEV P 
Sbjct: 67   SAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLFDLEVGPH 126

Query: 829  FESDEIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKKG 650
            FES+E+IEK+RVLPRKLHLHAGTDAVLNVTF+RAPS ALLKVDVPLVFRGEDV PGLKKG
Sbjct: 127  FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 649  AYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCNV 470
            AYLNTI RTVKYLCPADI+PPYIDVDLSELD GQKIV GDL VHPALKLL+SK+E VC +
Sbjct: 187  AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 469  KGARVTTEPKKSK 431
             G RV ++ +KSK
Sbjct: 247  MGTRV-SDQRKSK 258


>ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
            gi|449494761|ref|XP_004159639.1| PREDICTED: 50S ribosomal
            protein L25-like [Cucumis sativus]
          Length = 260

 Score =  370 bits (951), Expect = e-100
 Identities = 190/254 (74%), Positives = 219/254 (86%), Gaps = 4/254 (1%)
 Frame = -3

Query: 1180 PLLKKAIQLRFFSQA---ATAAVQELEIQPL-TYLEGFPKPDPKHDETIIAIPRSISGKN 1013
            P L + + LR +S A   ATA   +   +PL +YLEGFPKPDPK+ ETI+AIPRSISGK+
Sbjct: 8    PTLSRVL-LRRYSAATAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPRSISGKS 66

Query: 1012 ISAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLEVRP 833
            ISAKERK GRVPSI+FEQE G+ GGNKRLISVRTNQI KLV +LGRSFFLSRLF+LEV  
Sbjct: 67   ISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLFDLEVLS 126

Query: 832  DFESDEIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRGEDVCPGLKK 653
            DFES +I+EK+RVLPRK+HLHAGTDA LNVTF+RAPS A+LKVDVPLVFRGEDVCPGL+K
Sbjct: 127  DFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDVCPGLRK 186

Query: 652  GAYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLLQSKEEAVCN 473
            G+YLNTI RTVKYLCPADI+PPYIDVDLSELDVGQK+V GDL VHPALKL++SK+E VC 
Sbjct: 187  GSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSKDEPVCK 246

Query: 472  VKGARVTTEPKKSK 431
            + GARV+ + KKSK
Sbjct: 247  IAGARVSDQQKKSK 260


>ref|XP_003624695.1| 50S ribosomal protein L25 [Medicago truncatula]
            gi|87162737|gb|ABD28532.1| Ribosomal protein L25
            [Medicago truncatula] gi|217072210|gb|ACJ84465.1| unknown
            [Medicago truncatula] gi|355499710|gb|AES80913.1| 50S
            ribosomal protein L25 [Medicago truncatula]
          Length = 266

 Score =  361 bits (927), Expect = 2e-97
 Identities = 186/264 (70%), Positives = 217/264 (82%), Gaps = 11/264 (4%)
 Frame = -3

Query: 1189 IQRPLLKKAIQLRFFSQAATAAVQELE----IQPLTYLEGFPKPDPKHDETIIAIPRSIS 1022
            + R LL+  +  R FS  ATA +   E    +QPLTYL+GFPKP+PK+DETI+AIPR  S
Sbjct: 3    LPRTLLRPFLHRRHFSAIATALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDS 62

Query: 1021 GKNISAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLE 842
            GKNISAKERKVGRVPSI+FEQE G  GGNKRLISVR++QI+KLVNHLGRSFFLSRLF+L+
Sbjct: 63   GKNISAKERKVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQ 122

Query: 841  VRPDFESD------EIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRG 680
            V   F+SD      +IIE +RVLPR +HL AGTDA LNVTF+RAPS A LKVDVP+VFRG
Sbjct: 123  VLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRG 182

Query: 679  EDVCPGLKKGAYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLL 500
            +D+ PGLKKGA LNTI RTVKYLCPADI+PPYIDVDLSELDVGQK++ GDLNVHPALKLL
Sbjct: 183  DDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPALKLL 242

Query: 499  QSKEEAVCNVKGARVT-TEPKKSK 431
              K+EAVC + G RV+ T+PKK+K
Sbjct: 243  HPKDEAVCKIMGQRVSETQPKKTK 266


>gb|AFK35431.1| unknown [Medicago truncatula]
          Length = 266

 Score =  360 bits (923), Expect = 6e-97
 Identities = 185/264 (70%), Positives = 216/264 (81%), Gaps = 11/264 (4%)
 Frame = -3

Query: 1189 IQRPLLKKAIQLRFFSQAATAAVQELE----IQPLTYLEGFPKPDPKHDETIIAIPRSIS 1022
            + R LL+  +  R FS  ATA +   E    +QPLTYL+GFPKP+PK+DETI+AIPR  S
Sbjct: 3    LPRTLLRPFLHRRHFSAIATALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDS 62

Query: 1021 GKNISAKERKVGRVPSILFEQEKGEEGGNKRLISVRTNQIKKLVNHLGRSFFLSRLFNLE 842
            GKNISAKERKVGRVPSI+FEQE G  GGNKRLISVR++QI+KLVNHLGRSFFLSRLF+L+
Sbjct: 63   GKNISAKERKVGRVPSIVFEQEDGHLGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQ 122

Query: 841  VRPDFESD------EIIEKIRVLPRKLHLHAGTDAVLNVTFMRAPSSALLKVDVPLVFRG 680
            V   F+SD      +IIE +RVLPR +HL AGTDA LNVTF+RAPS A LKVDVP+VFRG
Sbjct: 123  VLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRG 182

Query: 679  EDVCPGLKKGAYLNTINRTVKYLCPADIVPPYIDVDLSELDVGQKIVRGDLNVHPALKLL 500
            +D+ PGLKKGA LNTI RTVKYLCPADI+PPYIDVDLSELDVGQK++ GDLNVHP LKLL
Sbjct: 183  DDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPTLKLL 242

Query: 499  QSKEEAVCNVKGARVT-TEPKKSK 431
              K+EAVC + G RV+ T+PKK+K
Sbjct: 243  HPKDEAVCKIMGQRVSETQPKKTK 266