BLASTX nr result

ID: Coptis25_contig00013097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013097
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan ancho...   223   2e-81
ref|XP_002299558.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-78
ref|XP_003525538.1| PREDICTED: phosphatidylinositol glycan ancho...   213   9e-78
ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan ancho...   211   4e-77
ref|XP_002509716.1| conserved hypothetical protein [Ricinus comm...   216   4e-74

>ref|XP_002276721.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein [Vitis vinifera] gi|297742569|emb|CBI34718.3|
           unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  223 bits (567), Expect(2) = 2e-81
 Identities = 117/176 (66%), Positives = 124/176 (70%)
 Frame = -2

Query: 611 PNIGVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKS 432
           PNIGVLWY                  VNILFMILPLAIRLNHRPCFLAFVYIAISS+LKS
Sbjct: 319 PNIGVLWYFFAEVFDYFRNFFLIVFHVNILFMILPLAIRLNHRPCFLAFVYIAISSLLKS 378

Query: 431 YPSVGDPALYXXXXXXXXXXXXXXXXXXXVGDPALYLALLGWFVTELAEMKFSFFLFCGY 252
           YPSVGD AL                          YL LLG FV ELA+M+FSFFLFCGY
Sbjct: 379 YPSVGDSAL--------------------------YLGLLGLFVKELADMQFSFFLFCGY 412

Query: 251 VGVTLLSPVMHNLWIWRGTGNANFYFATAIGYACLQIILVVESVSAMLQHDRMIRK 84
           VG++ LSPVMHNLWIWRGTGNANFYFATA+ YAC QIILVVESVSAML HDRM+RK
Sbjct: 413 VGISFLSPVMHNLWIWRGTGNANFYFATAMAYACFQIILVVESVSAMLNHDRMLRK 468



 Score =  107 bits (266), Expect(2) = 2e-81
 Identities = 57/123 (46%), Positives = 72/123 (58%), Gaps = 14/123 (11%)
 Frame = -3

Query: 1012 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLCLQKGSSTYGNKP-------------- 875
            WV A+HLS                GPD+P RKL  Q+ SS  G  P              
Sbjct: 201  WVIATHLSLYPAILIVPLILILGYGPDSPRRKLFQQRASSKVGENPSTDIRYQQKELASQ 260

Query: 874  PLAGRSFSWRPVIYFLLRAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPN 695
            P+    FSWR V++F+L A++W+ YVL LC IS+++YGGL EMFK T+GFILTV DLSPN
Sbjct: 261  PMLPFRFSWRLVVHFILWASLWSCYVLLLCGISVRRYGGLGEMFKSTYGFILTVPDLSPN 320

Query: 694  IGL 686
            IG+
Sbjct: 321  IGV 323


>ref|XP_002299558.1| predicted protein [Populus trichocarpa] gi|222846816|gb|EEE84363.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  216 bits (549), Expect(2) = 4e-78
 Identities = 112/176 (63%), Positives = 122/176 (69%)
 Frame = -2

Query: 611 PNIGVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKS 432
           PNIGVLWY                  +NILFMILPLAIRL HRPCFLAF+YIAISSMLKS
Sbjct: 307 PNIGVLWYFFAEVFDFFRSFFMIVFHLNILFMILPLAIRLKHRPCFLAFIYIAISSMLKS 366

Query: 431 YPSVGDPALYXXXXXXXXXXXXXXXXXXXVGDPALYLALLGWFVTELAEMKFSFFLFCGY 252
           YPSVGD AL                          YL LLG F+ ELA+MKFSFFL CGY
Sbjct: 367 YPSVGDSAL--------------------------YLGLLGLFLDELADMKFSFFLLCGY 400

Query: 251 VGVTLLSPVMHNLWIWRGTGNANFYFATAIGYACLQIILVVESVSAMLQHDRMIRK 84
           +GV+LLSPVMHNLWIWRGTGNANFY+AT + YACLQIILVVESVSA+L HDR +RK
Sbjct: 401 IGVSLLSPVMHNLWIWRGTGNANFYYATGMAYACLQIILVVESVSAVLNHDRKLRK 456



 Score =  103 bits (256), Expect(2) = 4e-78
 Identities = 56/121 (46%), Positives = 72/121 (59%), Gaps = 12/121 (9%)
 Frame = -3

Query: 1012 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLCLQKGSSTYGNK------------PPL 869
            WV ++HLS                GPD P RKL LQKG    G+                
Sbjct: 191  WVMSTHLSLYPAILIIPVILLLGYGPDTPPRKLFLQKGYGKNGDNHSSDNCGQQETNQSK 250

Query: 868  AGRSFSWRPVIYFLLRAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPNIG 689
            A  +FSWRPVI+FL  +++W+ YVL LCSIS+K +G L EMF+RT+GFILT+ED+SPNIG
Sbjct: 251  AEVTFSWRPVIHFLFWSSLWSAYVLVLCSISVKPHGSLWEMFQRTYGFILTMEDMSPNIG 310

Query: 688  L 686
            +
Sbjct: 311  V 311


>ref|XP_003525538.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein-like [Glycine max]
          Length = 464

 Score =  213 bits (542), Expect(2) = 9e-78
 Identities = 114/180 (63%), Positives = 119/180 (66%)
 Frame = -2

Query: 611 PNIGVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKS 432
           PNIGVLWY                   NIL MI PLA+RLNHRPCFLAFVYI ISSMLKS
Sbjct: 304 PNIGVLWYFFAEVFDFFRNFFLIVFHGNILLMIAPLALRLNHRPCFLAFVYIVISSMLKS 363

Query: 431 YPSVGDPALYXXXXXXXXXXXXXXXXXXXVGDPALYLALLGWFVTELAEMKFSFFLFCGY 252
           YPSVGD AL                          YL LLG F  EL +M+FSFFLF GY
Sbjct: 364 YPSVGDSAL--------------------------YLGLLGLFAYELKDMQFSFFLFSGY 397

Query: 251 VGVTLLSPVMHNLWIWRGTGNANFYFATAIGYACLQIILVVESVSAMLQHDRMIRKQYNA 72
           VGV+LLSPVMHNLWIWRGTGNANFYFATAI YACLQIILVVESVSAML HDR + K Y A
Sbjct: 398 VGVSLLSPVMHNLWIWRGTGNANFYFATAIAYACLQIILVVESVSAMLNHDRKLTKLYTA 457



 Score =  104 bits (260), Expect(2) = 9e-78
 Identities = 56/122 (45%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
 Frame = -3

Query: 1012 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLCLQKGSSTYGNKPPLAGRS-------- 857
            WV A+HLS                GPDAP RKL  Q+ +   GN  P    S        
Sbjct: 187  WVMATHLSLYPAILIIPVILLLGYGPDAPPRKLFCQRKNLEVGNSTPSDSCSEEEAKNQL 246

Query: 856  -----FSWRPVIYFLLRAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPNI 692
                 FSWRPV++FL    +W+ YVL LC I ++QYGGL E+FKRT+GFILT +DLSPNI
Sbjct: 247  KVANVFSWRPVVFFLFWTLLWSSYVLVLCGICVQQYGGLHELFKRTYGFILTTQDLSPNI 306

Query: 691  GL 686
            G+
Sbjct: 307  GV 308


>ref|XP_003550876.1| PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U
           protein-like [Glycine max]
          Length = 468

 Score =  211 bits (537), Expect(2) = 4e-77
 Identities = 112/180 (62%), Positives = 118/180 (65%)
 Frame = -2

Query: 611 PNIGVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKS 432
           PNIGVLWY                   NIL MI PLA+RLNHRPCFLAFVYI ISSMLKS
Sbjct: 308 PNIGVLWYFFAEVFDFFRNFFLIVFHGNILLMIAPLALRLNHRPCFLAFVYIVISSMLKS 367

Query: 431 YPSVGDPALYXXXXXXXXXXXXXXXXXXXVGDPALYLALLGWFVTELAEMKFSFFLFCGY 252
           YPSVGD AL                          YL LLG F  EL +M+FSFFLF GY
Sbjct: 368 YPSVGDSAL--------------------------YLGLLGLFAYELKDMQFSFFLFSGY 401

Query: 251 VGVTLLSPVMHNLWIWRGTGNANFYFATAIGYACLQIILVVESVSAMLQHDRMIRKQYNA 72
           +GV+LLSPVMHNLWIWRGTGNANFYFATAI Y CLQIILVVESVSAML HDR + K Y A
Sbjct: 402 IGVSLLSPVMHNLWIWRGTGNANFYFATAIAYVCLQIILVVESVSAMLNHDRKLTKLYTA 461



 Score =  104 bits (259), Expect(2) = 4e-77
 Identities = 57/122 (46%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
 Frame = -3

Query: 1012 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLCLQKGSSTYGNKPPLAGRS-------- 857
            WV A+HLS                GPDAP RKL  Q+ +   GN  P    S        
Sbjct: 191  WVMATHLSLYPAILIIPVILLLGYGPDAPPRKLFCQRKNLEGGNSIPSDSCSEEEAKNQL 250

Query: 856  -----FSWRPVIYFLLRAAIWAVYVLFLCSISLKQYGGLSEMFKRTHGFILTVEDLSPNI 692
                 FSWRPV+ FL  A +W+ YVL LC I ++QYGGL E+FKRT+GFILT++DLSPNI
Sbjct: 251  KVANVFSWRPVVLFLFWALLWSSYVLVLCGIYVQQYGGLQELFKRTYGFILTIQDLSPNI 310

Query: 691  GL 686
            G+
Sbjct: 311  GV 312


>ref|XP_002509716.1| conserved hypothetical protein [Ricinus communis]
           gi|223549615|gb|EEF51103.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 490

 Score =  216 bits (550), Expect(2) = 4e-74
 Identities = 113/176 (64%), Positives = 122/176 (69%)
 Frame = -2

Query: 611 PNIGVLWYXXXXXXXXXXXXXXXXXXVNILFMILPLAIRLNHRPCFLAFVYIAISSMLKS 432
           PNIGVLWY                   NILFM+LPLAIRL HRPCFLAFVYIAISSMLKS
Sbjct: 327 PNIGVLWYFFAEVFDFFRNFFLIVFHTNILFMVLPLAIRLYHRPCFLAFVYIAISSMLKS 386

Query: 431 YPSVGDPALYXXXXXXXXXXXXXXXXXXXVGDPALYLALLGWFVTELAEMKFSFFLFCGY 252
           YPSVGD AL                          Y+ LLG F+ ELA+M+FSFF+FCGY
Sbjct: 387 YPSVGDSAL--------------------------YMGLLGLFLDELADMQFSFFIFCGY 420

Query: 251 VGVTLLSPVMHNLWIWRGTGNANFYFATAIGYACLQIILVVESVSAMLQHDRMIRK 84
           VGV+LLSPVMHNLWIWRGTGNANFYFATAI YACLQIILVVESVSA+L HDR + K
Sbjct: 421 VGVSLLSPVMHNLWIWRGTGNANFYFATAIAYACLQIILVVESVSAVLNHDRKLTK 476



 Score = 89.4 bits (220), Expect(2) = 4e-74
 Identities = 55/125 (44%), Positives = 69/125 (55%), Gaps = 16/125 (12%)
 Frame = -3

Query: 1012 WVTASHLSXXXXXXXXXXXXXXXXGPDAPSRKLCLQK----GSSTYGNKPPLAGRSF--- 854
            WV A+HLS                GPDAP +KL LQK        + + P    + F   
Sbjct: 207  WVMATHLSLYPTILIIPVILLLGCGPDAPPQKLFLQKEHCKNCDNFSSAPHEDEKIFNQS 266

Query: 853  ------SWRPVIYFLLRAAIWAVYVLFLCSISLKQYGGLSE---MFKRTHGFILTVEDLS 701
                  SWRPV+ FL  A +W++YVL LCSIS+KQYG L E      +T+GFILTVED+S
Sbjct: 267  KPQIIVSWRPVMLFLFWAFLWSIYVLVLCSISVKQYGSLWEXCFSHLQTYGFILTVEDMS 326

Query: 700  PNIGL 686
            PNIG+
Sbjct: 327  PNIGV 331


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