BLASTX nr result
ID: Coptis25_contig00013083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013083
(1244 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indi... 97 4e-37
ref|XP_002466828.1| hypothetical protein SORBIDRAFT_01g014850 [S... 100 9e-37
ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium di... 99 9e-37
ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group] g... 96 8e-36
sp|Q75I54.1|CCA31_ORYSJ RecName: Full=Cyclin-A3-1; AltName: Full... 96 8e-36
>gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indica Group]
Length = 373
Score = 97.4 bits (241), Expect(2) = 4e-37
Identities = 51/153 (33%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Frame = -3
Query: 1059 PLMCPPYTSDILSFYRSVESTEKYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYG 880
P +C PY SDI S+ RS+E K P D + +VQ + RA++V+ + +AE
Sbjct: 97 PQLCAPYASDINSYLRSMEVQPKRRPAADYIETVQVDVTANMRAILVDWLVEVAEEYKLV 156
Query: 879 THCLCLSVGYLDRFLSSTEVDNDDLLVVAMASLLISSKYVGLIPPNAKRFCFQFCTT--- 709
+ L L+V Y+DRFLS+ ++ L ++ ++++LI+SKY + PPN + FC+ T
Sbjct: 157 SDTLYLTVSYIDRFLSAKAINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMK 216
Query: 708 QQILEWETKLLHLLQYDIWTPTIMTFLGHLVQA 610
Q++++ E +L++L++++ PT TFL +++
Sbjct: 217 QEVVKMERDILNVLKFEMGNPTTKTFLRMFIRS 249
Score = 85.1 bits (209), Expect(2) = 4e-37
Identities = 44/116 (37%), Positives = 67/116 (57%)
Frame = -2
Query: 604 FCCYYFAELSLLEYEMLRFVPSKVAAAIVFLASVTFNPEKNPWNQELEAVSKYKSCQXXX 425
F C Y AELSLLEY +R +PS VAA++VF+A +T +P+ NPW+++L+ V+ Y++ +
Sbjct: 263 FMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDPDTNPWSKKLQEVTGYRASELKD 322
Query: 424 XXXXXXXXXXKRKSCSLDEYKEEIHGSAIMANFSQEKFEAVSEVVPLVDIPVQYFQ 257
RK SL AI + Q +F+ VS ++P V+IP YF+
Sbjct: 323 CITCIHDLQLNRKGSSL---------MAIRDKYKQHRFKGVSTLLPPVEIPASYFE 369
>ref|XP_002466828.1| hypothetical protein SORBIDRAFT_01g014850 [Sorghum bicolor]
gi|241920682|gb|EER93826.1| hypothetical protein
SORBIDRAFT_01g014850 [Sorghum bicolor]
Length = 378
Score = 100 bits (249), Expect(2) = 9e-37
Identities = 51/153 (33%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Frame = -3
Query: 1059 PLMCPPYTSDILSFYRSVESTEKYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYG 880
P +C PY SDI S+ RS+ES K P D + +VQ + RA++V+ + +AE
Sbjct: 101 PQLCKPYASDIYSYLRSMESQPKRRPAADYIAAVQVDVTPNMRAILVDWLVEVAEEYKLV 160
Query: 879 THCLCLSVGYLDRFLSSTEVDNDDLLVVAMASLLISSKYVGLIPPNAKRFCF---QFCTT 709
+ L L+V Y+DRFLS+ ++ L ++ + ++L++SKY + PPN + FC+ T
Sbjct: 161 SDTLYLTVSYVDRFLSANALNRQRLQLLGVCAMLVASKYEEISPPNVEDFCYITDNTYTK 220
Query: 708 QQILEWETKLLHLLQYDIWTPTIMTFLGHLVQA 610
Q++++ E+ +L++L++++ PT TFL +++
Sbjct: 221 QEVVKMESDILNVLKFEVGNPTPKTFLRMFIRS 253
Score = 80.9 bits (198), Expect(2) = 9e-37
Identities = 41/112 (36%), Positives = 64/112 (57%)
Frame = -2
Query: 592 YFAELSLLEYEMLRFVPSKVAAAIVFLASVTFNPEKNPWNQELEAVSKYKSCQXXXXXXX 413
Y ELSLL+Y +LRF+PS VAA++VF+A +T +P NPW+++++ ++ YK +
Sbjct: 272 YLCELSLLDYSLLRFLPSLVAASVVFVARLTLDPHTNPWSKKMQTLTGYKPSELKDCVAA 331
Query: 412 XXXXXXKRKSCSLDEYKEEIHGSAIMANFSQEKFEAVSEVVPLVDIPVQYFQ 257
RK S+ AI + Q KF+ VS ++P V+IP YF+
Sbjct: 332 IHHMQLNRKYSSM---------MAIREKYKQHKFKGVSALLPPVEIPASYFK 374
>ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium distachyon]
Length = 368
Score = 99.0 bits (245), Expect(2) = 9e-37
Identities = 51/153 (33%), Positives = 93/153 (60%), Gaps = 3/153 (1%)
Frame = -3
Query: 1059 PLMCPPYTSDILSFYRSVESTEKYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYG 880
P +C PY SDI S+ RS+E K P D + +VQK + R ++V+ + +AE
Sbjct: 92 PQLCAPYASDIYSYLRSMEVEAKRRPAADYIETVQKDVTSLMRGILVDWLVEVAEEYKLV 151
Query: 879 THCLCLSVGYLDRFLSSTEVDNDDLLVVAMASLLISSKYVGLIPPNAKRFCFQFCTT--- 709
+ L L++ Y+DRFLS+ ++ L ++ ++++LI+SKY + PPN + FC+ T
Sbjct: 152 SDTLYLTISYIDRFLSANSLNRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMK 211
Query: 708 QQILEWETKLLHLLQYDIWTPTIMTFLGHLVQA 610
Q++++ E+ +L+LL++++ PT TFL +++
Sbjct: 212 QELIKMESDILNLLKFEMGNPTAKTFLRMFIRS 244
Score = 82.4 bits (202), Expect(2) = 9e-37
Identities = 45/121 (37%), Positives = 69/121 (57%)
Frame = -2
Query: 619 SSSFIFCCYYFAELSLLEYEMLRFVPSKVAAAIVFLASVTFNPEKNPWNQELEAVSKYKS 440
S S F Y +ELSLLEY LRF+PS +AA+ VF+A +T +P+ NPW+++L++V+ YK+
Sbjct: 253 SLSLEFMGSYLSELSLLEYSCLRFLPSAIAASAVFVAKLTLDPDTNPWSKKLQSVTGYKA 312
Query: 439 CQXXXXXXXXXXXXXKRKSCSLDEYKEEIHGSAIMANFSQEKFEAVSEVVPLVDIPVQYF 260
+ +RK S +AI + Q +F+ VS ++P V IP YF
Sbjct: 313 SELKDCITTIHDLQLRRKGSS---------WNAIRDKYKQPRFKGVSALLPPVHIPASYF 363
Query: 259 Q 257
+
Sbjct: 364 E 364
>ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group]
gi|255674696|dbj|BAF12554.2| Os03g0607600 [Oryza sativa
Japonica Group]
Length = 395
Score = 96.3 bits (238), Expect(2) = 8e-36
Identities = 50/153 (32%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Frame = -3
Query: 1059 PLMCPPYTSDILSFYRSVESTEKYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYG 880
P +C PY SDI S+ RS+E K P D + +VQ + R ++V+ + +AE
Sbjct: 97 PQLCAPYASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEVAEEYKLV 156
Query: 879 THCLCLSVGYLDRFLSSTEVDNDDLLVVAMASLLISSKYVGLIPPNAKRFCFQFCTT--- 709
+ L L+V Y+DRFLS+ ++ L ++ ++++LI+SKY + PPN + FC+ T
Sbjct: 157 SDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMK 216
Query: 708 QQILEWETKLLHLLQYDIWTPTIMTFLGHLVQA 610
Q++++ E +L++L++++ PT TFL +++
Sbjct: 217 QEVVKMERDILNVLKFEMGNPTTKTFLRMFIRS 249
Score = 82.0 bits (201), Expect(2) = 8e-36
Identities = 43/116 (37%), Positives = 66/116 (56%)
Frame = -2
Query: 604 FCCYYFAELSLLEYEMLRFVPSKVAAAIVFLASVTFNPEKNPWNQELEAVSKYKSCQXXX 425
F C Y AELSLLEY +R +PS VAA++VF+A +T + + NPW+++L+ V+ Y++ +
Sbjct: 263 FMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASELKD 322
Query: 424 XXXXXXXXXXKRKSCSLDEYKEEIHGSAIMANFSQEKFEAVSEVVPLVDIPVQYFQ 257
RK SL AI + Q +F+ VS ++P V+IP YF+
Sbjct: 323 CITCIHDLQLNRKGSSL---------MAIRDKYKQHRFKGVSTLLPPVEIPASYFE 369
>sp|Q75I54.1|CCA31_ORYSJ RecName: Full=Cyclin-A3-1; AltName: Full=G2/mitotic-specific
cyclin-A3-1; Short=CycA3;1 gi|40538955|gb|AAR87212.1|
putative A-type cyclin [Oryza sativa Japonica Group]
gi|108709751|gb|ABF97546.1| G2/mitotic-specific cyclin
C13-1, putative, expressed [Oryza sativa Japonica Group]
gi|125544825|gb|EAY90964.1| hypothetical protein
OsI_12578 [Oryza sativa Indica Group]
Length = 373
Score = 96.3 bits (238), Expect(2) = 8e-36
Identities = 50/153 (32%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Frame = -3
Query: 1059 PLMCPPYTSDILSFYRSVESTEKYLPLHDSMGSVQKRIDVEKRAVVVNEVARLAEILGYG 880
P +C PY SDI S+ RS+E K P D + +VQ + R ++V+ + +AE
Sbjct: 97 PQLCAPYASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEVAEEYKLV 156
Query: 879 THCLCLSVGYLDRFLSSTEVDNDDLLVVAMASLLISSKYVGLIPPNAKRFCFQFCTT--- 709
+ L L+V Y+DRFLS+ ++ L ++ ++++LI+SKY + PPN + FC+ T
Sbjct: 157 SDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMK 216
Query: 708 QQILEWETKLLHLLQYDIWTPTIMTFLGHLVQA 610
Q++++ E +L++L++++ PT TFL +++
Sbjct: 217 QEVVKMERDILNVLKFEMGNPTTKTFLRMFIRS 249
Score = 82.0 bits (201), Expect(2) = 8e-36
Identities = 43/116 (37%), Positives = 66/116 (56%)
Frame = -2
Query: 604 FCCYYFAELSLLEYEMLRFVPSKVAAAIVFLASVTFNPEKNPWNQELEAVSKYKSCQXXX 425
F C Y AELSLLEY +R +PS VAA++VF+A +T + + NPW+++L+ V+ Y++ +
Sbjct: 263 FMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASELKD 322
Query: 424 XXXXXXXXXXKRKSCSLDEYKEEIHGSAIMANFSQEKFEAVSEVVPLVDIPVQYFQ 257
RK SL AI + Q +F+ VS ++P V+IP YF+
Sbjct: 323 CITCIHDLQLNRKGSSL---------MAIRDKYKQHRFKGVSTLLPPVEIPASYFE 369