BLASTX nr result

ID: Coptis25_contig00013071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013071
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloropla...   161   3e-38
ref|XP_003601651.1| Cysteine desulfurase [Medicago truncatula] g...   160   7e-38
ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla...   158   2e-37
emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera]   158   2e-37
ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arab...   153   5e-36

>ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloroplastic-like [Glycine max]
          Length = 468

 Score =  161 bits (408), Expect(2) = 3e-38
 Identities = 77/99 (77%), Positives = 88/99 (88%)
 Frame = +1

Query: 1   VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180
           VP+QIVAQKTGA LKFV L ++E+PDIDKLKEMLS KTK+VV HHVSN L  VLPI+DI 
Sbjct: 182 VPWQIVAQKTGAVLKFVDLNQDEIPDIDKLKEMLSRKTKIVVVHHVSNVLASVLPIQDIA 241

Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297
            W+H+VGAKVLVDACQSVPHM++DVQSL+ DFLVASSHK
Sbjct: 242 QWAHDVGAKVLVDACQSVPHMMIDVQSLNVDFLVASSHK 280



 Score = 21.9 bits (45), Expect(2) = 3e-38
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 297 GAGFLYGKSKVLS 335
           G GFLYGK  +LS
Sbjct: 286 GIGFLYGKIDLLS 298


>ref|XP_003601651.1| Cysteine desulfurase [Medicago truncatula]
           gi|355490699|gb|AES71902.1| Cysteine desulfurase
           [Medicago truncatula]
          Length = 327

 Score =  160 bits (404), Expect(2) = 7e-38
 Identities = 76/99 (76%), Positives = 88/99 (88%)
 Frame = +1

Query: 1   VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180
           VP+Q+VAQK GA LKFV+L ++E+PDIDKLKE+LS+KTK+V  HHVSN L  VLPI+DI 
Sbjct: 180 VPWQLVAQKVGAVLKFVNLNQDEIPDIDKLKEVLSKKTKIVAVHHVSNVLASVLPIRDIA 239

Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297
            W+H VGAKVLVDACQSVPHMVVDVQ+LDADFLVASSHK
Sbjct: 240 HWAHGVGAKVLVDACQSVPHMVVDVQNLDADFLVASSHK 278



 Score = 22.3 bits (46), Expect(2) = 7e-38
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 297 GAGFLYGKSKVLS 335
           G GFLYGK  +LS
Sbjct: 284 GIGFLYGKMDLLS 296


>ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera]
           gi|296083920|emb|CBI24308.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  158 bits (399), Expect(2) = 2e-37
 Identities = 76/99 (76%), Positives = 86/99 (86%)
 Frame = +1

Query: 1   VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180
           VP+Q+VAQKTGA LKFV+LTE+EVPD++KLKEM+S KTKL+V HH+SN L   LPI DI 
Sbjct: 177 VPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVLASALPIYDIV 236

Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297
            W+H VGAKVLVDACQSVPHM VDVQ LDADFLVASSHK
Sbjct: 237 HWAHAVGAKVLVDACQSVPHMAVDVQRLDADFLVASSHK 275



 Score = 22.7 bits (47), Expect(2) = 2e-37
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 297 GAGFLYGKSKVL 332
           G GFLYGKS +L
Sbjct: 281 GIGFLYGKSDLL 292


>emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera]
          Length = 427

 Score =  158 bits (399), Expect(2) = 2e-37
 Identities = 76/99 (76%), Positives = 86/99 (86%)
 Frame = +1

Query: 1   VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180
           VP+Q+VAQKTGA LKFV+LTE+EVPD++KLKEM+S KTKL+V HH+SN L   LPI DI 
Sbjct: 72  VPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVLASALPIYDIV 131

Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297
            W+H VGAKVLVDACQSVPHM VDVQ LDADFLVASSHK
Sbjct: 132 HWAHAVGAKVLVDACQSVPHMAVDVQRLDADFLVASSHK 170



 Score = 22.7 bits (47), Expect(2) = 2e-37
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 297 GAGFLYGKSKVL 332
           G GFLYGKS +L
Sbjct: 176 GIGFLYGKSDLL 187


>ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp.
           lyrata] gi|297338302|gb|EFH68719.1| hypothetical protein
           ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score =  153 bits (387), Expect(2) = 5e-36
 Identities = 74/99 (74%), Positives = 87/99 (87%)
 Frame = +1

Query: 1   VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180
           VP+QIV+QKTGA LKFV+L ++EVPDI+KL+EM+S KTKLV  HHVSN L   LPI++I 
Sbjct: 180 VPWQIVSQKTGAVLKFVTLNDDEVPDIEKLREMISPKTKLVAVHHVSNVLASSLPIEEIV 239

Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297
            W+H+VGAKVLVDACQSVPHMVVDVQ L+ADFLVASSHK
Sbjct: 240 VWAHDVGAKVLVDACQSVPHMVVDVQKLNADFLVASSHK 278



 Score = 22.7 bits (47), Expect(2) = 5e-36
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 297 GAGFLYGKSKVL 332
           G GFLYGKS +L
Sbjct: 284 GIGFLYGKSDLL 295


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