BLASTX nr result
ID: Coptis25_contig00013071
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00013071 (335 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloropla... 161 3e-38 ref|XP_003601651.1| Cysteine desulfurase [Medicago truncatula] g... 160 7e-38 ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla... 158 2e-37 emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera] 158 2e-37 ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arab... 153 5e-36 >ref|XP_003546241.1| PREDICTED: cysteine desulfurase 2, chloroplastic-like [Glycine max] Length = 468 Score = 161 bits (408), Expect(2) = 3e-38 Identities = 77/99 (77%), Positives = 88/99 (88%) Frame = +1 Query: 1 VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180 VP+QIVAQKTGA LKFV L ++E+PDIDKLKEMLS KTK+VV HHVSN L VLPI+DI Sbjct: 182 VPWQIVAQKTGAVLKFVDLNQDEIPDIDKLKEMLSRKTKIVVVHHVSNVLASVLPIQDIA 241 Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297 W+H+VGAKVLVDACQSVPHM++DVQSL+ DFLVASSHK Sbjct: 242 QWAHDVGAKVLVDACQSVPHMMIDVQSLNVDFLVASSHK 280 Score = 21.9 bits (45), Expect(2) = 3e-38 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +3 Query: 297 GAGFLYGKSKVLS 335 G GFLYGK +LS Sbjct: 286 GIGFLYGKIDLLS 298 >ref|XP_003601651.1| Cysteine desulfurase [Medicago truncatula] gi|355490699|gb|AES71902.1| Cysteine desulfurase [Medicago truncatula] Length = 327 Score = 160 bits (404), Expect(2) = 7e-38 Identities = 76/99 (76%), Positives = 88/99 (88%) Frame = +1 Query: 1 VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180 VP+Q+VAQK GA LKFV+L ++E+PDIDKLKE+LS+KTK+V HHVSN L VLPI+DI Sbjct: 180 VPWQLVAQKVGAVLKFVNLNQDEIPDIDKLKEVLSKKTKIVAVHHVSNVLASVLPIRDIA 239 Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297 W+H VGAKVLVDACQSVPHMVVDVQ+LDADFLVASSHK Sbjct: 240 HWAHGVGAKVLVDACQSVPHMVVDVQNLDADFLVASSHK 278 Score = 22.3 bits (46), Expect(2) = 7e-38 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +3 Query: 297 GAGFLYGKSKVLS 335 G GFLYGK +LS Sbjct: 284 GIGFLYGKMDLLS 296 >ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera] gi|296083920|emb|CBI24308.3| unnamed protein product [Vitis vinifera] Length = 463 Score = 158 bits (399), Expect(2) = 2e-37 Identities = 76/99 (76%), Positives = 86/99 (86%) Frame = +1 Query: 1 VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180 VP+Q+VAQKTGA LKFV+LTE+EVPD++KLKEM+S KTKL+V HH+SN L LPI DI Sbjct: 177 VPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVLASALPIYDIV 236 Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297 W+H VGAKVLVDACQSVPHM VDVQ LDADFLVASSHK Sbjct: 237 HWAHAVGAKVLVDACQSVPHMAVDVQRLDADFLVASSHK 275 Score = 22.7 bits (47), Expect(2) = 2e-37 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +3 Query: 297 GAGFLYGKSKVL 332 G GFLYGKS +L Sbjct: 281 GIGFLYGKSDLL 292 >emb|CAN74051.1| hypothetical protein VITISV_014856 [Vitis vinifera] Length = 427 Score = 158 bits (399), Expect(2) = 2e-37 Identities = 76/99 (76%), Positives = 86/99 (86%) Frame = +1 Query: 1 VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180 VP+Q+VAQKTGA LKFV+LTE+EVPD++KLKEM+S KTKL+V HH+SN L LPI DI Sbjct: 72 VPWQLVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVLASALPIYDIV 131 Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297 W+H VGAKVLVDACQSVPHM VDVQ LDADFLVASSHK Sbjct: 132 HWAHAVGAKVLVDACQSVPHMAVDVQRLDADFLVASSHK 170 Score = 22.7 bits (47), Expect(2) = 2e-37 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +3 Query: 297 GAGFLYGKSKVL 332 G GFLYGKS +L Sbjct: 176 GIGFLYGKSDLL 187 >ref|XP_002892460.1| hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata] gi|297338302|gb|EFH68719.1| hypothetical protein ARALYDRAFT_470910 [Arabidopsis lyrata subsp. lyrata] Length = 466 Score = 153 bits (387), Expect(2) = 5e-36 Identities = 74/99 (74%), Positives = 87/99 (87%) Frame = +1 Query: 1 VPFQIVAQKTGATLKFVSLTEEEVPDIDKLKEMLSEKTKLVVTHHVSNTLGFVLPIKDIT 180 VP+QIV+QKTGA LKFV+L ++EVPDI+KL+EM+S KTKLV HHVSN L LPI++I Sbjct: 180 VPWQIVSQKTGAVLKFVTLNDDEVPDIEKLREMISPKTKLVAVHHVSNVLASSLPIEEIV 239 Query: 181 SWSHNVGAKVLVDACQSVPHMVVDVQSLDADFLVASSHK 297 W+H+VGAKVLVDACQSVPHMVVDVQ L+ADFLVASSHK Sbjct: 240 VWAHDVGAKVLVDACQSVPHMVVDVQKLNADFLVASSHK 278 Score = 22.7 bits (47), Expect(2) = 5e-36 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = +3 Query: 297 GAGFLYGKSKVL 332 G GFLYGKS +L Sbjct: 284 GIGFLYGKSDLL 295